| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22127086
Identifier: 22127086
GI number: 22127086
Start: 3530533
End: 3532734
Strand: Direct
Name: 22127086
Synonym: y3210
Alternate gene names: NA
Gene position: 3530533-3532734 (Clockwise)
Preceding gene: 22127085
Following gene: 22127087
Centisome position: 76.74
GC content: 42.01
Gene sequence:
>2202_bases TTGGAAGGTAATGTCATGCATAATAAATTTAAGGCGAATACTCTCGCCATAAGTATCGCTGCTATTTTATTGTCGGTCTC TTTTAATACACTTGCCGTAGTATGCCCACCAGAAGCGCCGGCTGGCAGTAGTTGTGATGCGTTCATCGCTAATGATGGCA AGGCTGTGTCATTAGCTAATGATTTATATATCACCAATGGAAATGCATTAACTTATTCAGGTAACACTCCCTTTGTAGCA CAATATTTGCGTAAAAATATTATTGCCACCGGCACGGATGCACACGCTATTTATGCTGATGCAAACACCGTATTCAACAA TAACATTAACCTCGAAAGAGGTATTAGTATTATCAGCGAGAATGGTACAGCAATTAAAATTGACGGTTCATTCTCTCACA CAGCCGCAGCACCTAACTTTGGTATAGCCGTTAAAGATGGCTCTATTGTGAGAGGGAATGGTGCCGCTATCGATTTCCGT GATGCTCAAACAGCCATTCGTATGGATATTAATGGCAGTATCTATGGCGATATCCTGGGTAATGGGGTCACAGGAAATAA AATTAACTTTGCCTATCAAGGCGCTGCAGCGAATGCCTTATTCGATGGTTATACAATTTCAGGTGTTGAAAAATTAGAAA ACTGGGGCAACCTGAGTATTATTGCAAAAGACAGAACCATCACTTGGAGTGGTGATTTTACGAATAAAAACAATGCATCC CTTGACTTTAAAATTGGTGATGAGGTGGATTTAGCATCGCCCATTTTACTCGTTGAAGGTAAAACAGTATTTAATACAGG AAGTAAAGCCCTGTTCTCCTATGTGGGCAGTAATATTAATGACATCGTGAATAAAGATATTATCCTGATCCAGTCCAATG GTGGGATGAGCGGGCCAATTGATGTTGCCCAAAATGAAATCACCGTGGTCAGCAACCTCTCGCCGTTATTAGCACAGACA GATTCTTGGGTGACGACGACAGACCCCATAGTGAACGGGGGAATAAGCGGTAACCAGTTAGTCGTACGTTATGGTGTGAA CTACGAAGGTACCGATAATTTCCTAGACCTGGCACTTCAAGGTGGAGCTAATCAATATCAGCTCAATGCAGCGAATTATA TTGTGAGTTATGCACTCAGCCAATACAACAAAACCCAATCCGAAGCGAGTGGTGAATTACTGGCATTACTGACGTCAGCC GGTAATAGTAGTGCAGGTATTGCCAGTATAGCCGATCAGATAACCCCTAATGCGGAAGGCGGTGAAGTCCGGGCTGCATT ACGGATGGTAGATAAAATGCGCGATCAAATAGATAACCGCAGCCTCTATTTACGTAATCAGTCAGCAGCAACTCCGTGGA ATTTCTGGGCACAAACCTTATACGCCCACAGCCGTCAAAGCAGCGGGACTTATACACCGGGATATCAAACCAATGGCTAT GGCATTAATGTCGGTGTAGACCGCCGTTTTAATGATGAATCACTATTTGGTGTTTCTCTTGGCTATCAGAATGCCAATAT TAACATTCACAGCTATGGCAATGAAAAAGATGTCGATAGCTATGAACTTATGGCTTATACCGGCTGGTTTGATGATCGTT ACTTCTTCAATGGTAACGTGAATATGGGATATAACAGCAATAGCAGCACCCGCAATATTGGTGAAAATACCGGTTATCAA GGGAATACAAAAGCAACGGCAGACTATAACAGCTTACAAATGGGTTATCAGGTCAAGGCTGGCATGACCTTTGATTTGGA TGTGGTGAAACTACAGCCAAGTGTTGCCTATAACTATCAATGGCTTCGTGTGGATGACTATGCAGAGTTCGGCTCACCGG CCAGTTTGGAAGTGGATCGCCAATCTTATTCAGTAAAACATTTAGGTGCTGGTTTAACCGCATTTAATACCTATGAGTTA GGAATGGGTTTATTGACGCCGTCACTGACATTAATGGGTTACCGTGACCTGAATGACACCGAGATTATTGTCAAAAAGGC CGGATTAACCACAGATCAGGGGAAAGGAAAAGGCCGTTTTATCGTTGAAGGTGATAGCGTCGGCAATAATATTTTTGAAG CAAAAATGAACTCTAATTTGCAGTTAAAAAATAATCTTAGTCTGGATGGAAATATTAATTACTACAAACGTGGTGATTAT AACGAAGGCTATATCGGTCTGAGTGTTTCTAAACACTTCTAA
Upstream 100 bases:
>100_bases AATTAATGAATACACCTTTTTACTTAAAGCGGCACTGATGTCATTTGCAGCTTAAAATAATCTGGCCACACCTCTTTACA TTCATTTTTATTCCTGTTTA
Downstream 100 bases:
>100_bases AATTTTGTGGTCAGCAGAAATAGTGTCTTCCTCCTCTGATGACCACCTTTTTATTGGGTAGCGACGATTATGTATGCACC ATCCAGGTTAAAACTTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: Exoprotein With Autotransporter; Outer Membrane Autotransporter
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MEGNVMHNKFKANTLAISIAAILLSVSFNTLAVVCPPEAPAGSSCDAFIANDGKAVSLANDLYITNGNALTYSGNTPFVA QYLRKNIIATGTDAHAIYADANTVFNNNINLERGISIISENGTAIKIDGSFSHTAAAPNFGIAVKDGSIVRGNGAAIDFR DAQTAIRMDINGSIYGDILGNGVTGNKINFAYQGAAANALFDGYTISGVEKLENWGNLSIIAKDRTITWSGDFTNKNNAS LDFKIGDEVDLASPILLVEGKTVFNTGSKALFSYVGSNINDIVNKDIILIQSNGGMSGPIDVAQNEITVVSNLSPLLAQT DSWVTTTDPIVNGGISGNQLVVRYGVNYEGTDNFLDLALQGGANQYQLNAANYIVSYALSQYNKTQSEASGELLALLTSA GNSSAGIASIADQITPNAEGGEVRAALRMVDKMRDQIDNRSLYLRNQSAATPWNFWAQTLYAHSRQSSGTYTPGYQTNGY GINVGVDRRFNDESLFGVSLGYQNANINIHSYGNEKDVDSYELMAYTGWFDDRYFFNGNVNMGYNSNSSTRNIGENTGYQ GNTKATADYNSLQMGYQVKAGMTFDLDVVKLQPSVAYNYQWLRVDDYAEFGSPASLEVDRQSYSVKHLGAGLTAFNTYEL GMGLLTPSLTLMGYRDLNDTEIIVKKAGLTTDQGKGKGRFIVEGDSVGNNIFEAKMNSNLQLKNNLSLDGNINYYKRGDY NEGYIGLSVSKHF
Sequences:
>Translated_733_residues MEGNVMHNKFKANTLAISIAAILLSVSFNTLAVVCPPEAPAGSSCDAFIANDGKAVSLANDLYITNGNALTYSGNTPFVA QYLRKNIIATGTDAHAIYADANTVFNNNINLERGISIISENGTAIKIDGSFSHTAAAPNFGIAVKDGSIVRGNGAAIDFR DAQTAIRMDINGSIYGDILGNGVTGNKINFAYQGAAANALFDGYTISGVEKLENWGNLSIIAKDRTITWSGDFTNKNNAS LDFKIGDEVDLASPILLVEGKTVFNTGSKALFSYVGSNINDIVNKDIILIQSNGGMSGPIDVAQNEITVVSNLSPLLAQT DSWVTTTDPIVNGGISGNQLVVRYGVNYEGTDNFLDLALQGGANQYQLNAANYIVSYALSQYNKTQSEASGELLALLTSA GNSSAGIASIADQITPNAEGGEVRAALRMVDKMRDQIDNRSLYLRNQSAATPWNFWAQTLYAHSRQSSGTYTPGYQTNGY GINVGVDRRFNDESLFGVSLGYQNANINIHSYGNEKDVDSYELMAYTGWFDDRYFFNGNVNMGYNSNSSTRNIGENTGYQ GNTKATADYNSLQMGYQVKAGMTFDLDVVKLQPSVAYNYQWLRVDDYAEFGSPASLEVDRQSYSVKHLGAGLTAFNTYEL GMGLLTPSLTLMGYRDLNDTEIIVKKAGLTTDQGKGKGRFIVEGDSVGNNIFEAKMNSNLQLKNNLSLDGNINYYKRGDY NEGYIGLSVSKHF >Mature_733_residues MEGNVMHNKFKANTLAISIAAILLSVSFNTLAVVCPPEAPAGSSCDAFIANDGKAVSLANDLYITNGNALTYSGNTPFVA QYLRKNIIATGTDAHAIYADANTVFNNNINLERGISIISENGTAIKIDGSFSHTAAAPNFGIAVKDGSIVRGNGAAIDFR DAQTAIRMDINGSIYGDILGNGVTGNKINFAYQGAAANALFDGYTISGVEKLENWGNLSIIAKDRTITWSGDFTNKNNAS LDFKIGDEVDLASPILLVEGKTVFNTGSKALFSYVGSNINDIVNKDIILIQSNGGMSGPIDVAQNEITVVSNLSPLLAQT DSWVTTTDPIVNGGISGNQLVVRYGVNYEGTDNFLDLALQGGANQYQLNAANYIVSYALSQYNKTQSEASGELLALLTSA GNSSAGIASIADQITPNAEGGEVRAALRMVDKMRDQIDNRSLYLRNQSAATPWNFWAQTLYAHSRQSSGTYTPGYQTNGY GINVGVDRRFNDESLFGVSLGYQNANINIHSYGNEKDVDSYELMAYTGWFDDRYFFNGNVNMGYNSNSSTRNIGENTGYQ GNTKATADYNSLQMGYQVKAGMTFDLDVVKLQPSVAYNYQWLRVDDYAEFGSPASLEVDRQSYSVKHLGAGLTAFNTYEL GMGLLTPSLTLMGYRDLNDTEIIVKKAGLTTDQGKGKGRFIVEGDSVGNNIFEAKMNSNLQLKNNLSLDGNINYYKRGDY NEGYIGLSVSKHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79085; Mature: 79085
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGNVMHNKFKANTLAISIAAILLSVSFNTLAVVCPPEAPAGSSCDAFIANDGKAVSLAN CCCCEECCEECCHHHHHEEEHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEEE DLYITNGNALTYSGNTPFVAQYLRKNIIATGTDAHAIYADANTVFNNNINLERGISIISE EEEEECCCEEEECCCCHHHHHHHHHCEEECCCCCEEEEECCCEEECCCCCHHHCEEEEEC NGTAIKIDGSFSHTAAAPNFGIAVKDGSIVRGNGAAIDFRDAQTAIRMDINGSIYGDILG CCCEEEECCCCCCCCCCCCCEEEEECCCEEECCCCEEEECCCCEEEEEECCCEEEEEEEC NGVTGNKINFAYQGAAANALFDGYTISGVEKLENWGNLSIIAKDRTITWSGDFTNKNNAS CCCCCCEEEEEECCCCCCEEECCEEECCHHHHCCCCCEEEEEECCEEEECCCCCCCCCCE LDFKIGDEVDLASPILLVEGKTVFNTGSKALFSYVGSNINDIVNKDIILIQSNGGMSGPI EEEEECCCCCCCCCEEEEECCEEECCCHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCC DVAQNEITVVSNLSPLLAQTDSWVTTTDPIVNGGISGNQLVVRYGVNYEGTDNFLDLALQ CCCCCCEEEEECCCHHHHCCCCCEEECCCEEECCCCCCEEEEEECCCCCCCCCEEEEEEE GGANQYQLNAANYIVSYALSQYNKTQSEASGELLALLTSAGNSSAGIASIADQITPNAEG CCCCEEEEEHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCC GEVRAALRMVDKMRDQIDNRSLYLRNQSAATPWNFWAQTLYAHSRQSSGTYTPGYQTNGY CHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCE GINVGVDRRFNDESLFGVSLGYQNANINIHSYGNEKDVDSYELMAYTGWFDDRYFFNGNV EEEEEECCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCCE NMGYNSNSSTRNIGENTGYQGNTKATADYNSLQMGYQVKAGMTFDLDVVKLQPSVAYNYQ EECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECEEEECCCEEEEEEEEECCCEEEEEE WLRVDDYAEFGSPASLEVDRQSYSVKHLGAGLTAFNTYELGMGLLTPSLTLMGYRDLNDT EEEECCHHHCCCCCEEEECCCCCCCHHHCCCCEEEEEHHCCCHHHCCCEEEEEECCCCCC EIIVKKAGLTTDQGKGKGRFIVEGDSVGNNIFEAKMNSNLQLKNNLSLDGNINYYKRGDY EEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCEEEEECCCC NEGYIGLSVSKHF CCCEEEEEEECCC >Mature Secondary Structure MEGNVMHNKFKANTLAISIAAILLSVSFNTLAVVCPPEAPAGSSCDAFIANDGKAVSLAN CCCCEECCEECCHHHHHEEEHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEEE DLYITNGNALTYSGNTPFVAQYLRKNIIATGTDAHAIYADANTVFNNNINLERGISIISE EEEEECCCEEEECCCCHHHHHHHHHCEEECCCCCEEEEECCCEEECCCCCHHHCEEEEEC NGTAIKIDGSFSHTAAAPNFGIAVKDGSIVRGNGAAIDFRDAQTAIRMDINGSIYGDILG CCCEEEECCCCCCCCCCCCCEEEEECCCEEECCCCEEEECCCCEEEEEECCCEEEEEEEC NGVTGNKINFAYQGAAANALFDGYTISGVEKLENWGNLSIIAKDRTITWSGDFTNKNNAS CCCCCCEEEEEECCCCCCEEECCEEECCHHHHCCCCCEEEEEECCEEEECCCCCCCCCCE LDFKIGDEVDLASPILLVEGKTVFNTGSKALFSYVGSNINDIVNKDIILIQSNGGMSGPI EEEEECCCCCCCCCEEEEECCEEECCCHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCC DVAQNEITVVSNLSPLLAQTDSWVTTTDPIVNGGISGNQLVVRYGVNYEGTDNFLDLALQ CCCCCCEEEEECCCHHHHCCCCCEEECCCEEECCCCCCEEEEEECCCCCCCCCEEEEEEE GGANQYQLNAANYIVSYALSQYNKTQSEASGELLALLTSAGNSSAGIASIADQITPNAEG CCCCEEEEEHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCC GEVRAALRMVDKMRDQIDNRSLYLRNQSAATPWNFWAQTLYAHSRQSSGTYTPGYQTNGY CHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCE GINVGVDRRFNDESLFGVSLGYQNANINIHSYGNEKDVDSYELMAYTGWFDDRYFFNGNV EEEEEECCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCCE NMGYNSNSSTRNIGENTGYQGNTKATADYNSLQMGYQVKAGMTFDLDVVKLQPSVAYNYQ EECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECEEEECCCEEEEEEEEECCCEEEEEE WLRVDDYAEFGSPASLEVDRQSYSVKHLGAGLTAFNTYELGMGLLTPSLTLMGYRDLNDT EEEECCHHHCCCCCEEEECCCCCCCHHHCCCCEEEEEHHCCCHHHCCCEEEEEECCCCCC EIIVKKAGLTTDQGKGKGRFIVEGDSVGNNIFEAKMNSNLQLKNNLSLDGNINYYKRGDY EEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCEEEEECCCC NEGYIGLSVSKHF CCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA