| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127064
Identifier: 22127064
GI number: 22127064
Start: 3510222
End: 3511229
Strand: Direct
Name: 22127064
Synonym: y3188
Alternate gene names: NA
Gene position: 3510222-3511229 (Clockwise)
Preceding gene: 161484765
Following gene: 22127065
Centisome position: 76.3
GC content: 43.25
Gene sequence:
>1008_bases GTGATTCTATCCATGATTCGCTCGATTTATGCAACAAATAATTGCTCATTATCGGGTTTTTCTATCGATATATGCAATCT ATTATCTATCACCTACCCCACGGTCAATAGGACATCAAACATGTTAAATAAAATGCTATTACAAATCACCTTCGCAAGCC TCGTGACTGCTTCCGCCATCGCCACAGCCGCTACCACCGAGCCATTGAAAATGGAAGTCTATAACCCTGGTGAAAAAAGT ATCTTCCCAGTGTCTTCTGAAATTATCAGTGGAAAAAACGAAGTGGTACTGATTGATGCGCAATTTCAGCGTAATGATGC CGAAGCCTTGGTAAAAAAAATCCAACAAAGCGGTAAAAAATTAACCACCATTTATATCAGTCAGGCAGACCCCGATTTCT ACTTTGGTTTGGATGTCATCGCTAAAGCCTTCCCACAAGCTAAGGTGATCGCAACACCACAAACTATCGAAGAAATTAAG GCAACCAAAGACGGGAAAATGGCGTATTGGGGCCCTATTCTGAAAGAGAATGCGCCCACAGCCGTGATTATTCCACAGCC TCTACAAGGCAAAAGCTTCACCGTCGATGGGCAACAAATTGAAGTTGAAGGCTTAGATGGCCCATCACCTGAAAAAACCT TTGTCTGGATCCCATCACTGAAAGCGGTGGTTGGTGGTGTCGCCGTCTCCGGTAATATCCATCTATGGGTTGCGGATACC CAAACTCCGGAGTCACGCGAGAATTGGTTAACAACGTTGGAAAAAATTAAAGCACTCAAACCGGCTATCGTCGTCCCAGG GCACTTCCTCGATAACGCGCCACAAACTTTAGAATCGGTGACATTTACCCAAAACTATTTAACAACGTTAAATGCGGAAA TTCCTAAAGCAAAAGACTCTGCTGAGCTGATCGCGGTGATGAAGAAGCATTACCCTGAACTGAAAGACGAATCAAGTTTG GAATTAAGTGCAAAAGTATTGAAAAACGAAATGAAATGGCCTCAGTAA
Upstream 100 bases:
>100_bases AGCCAGATAGCGTGTCGCCATTGCCCTGGACATCTCCAGTGACTCTGCGGCGGCAATCATACTCCCCCGATCCACAATCG CGACAAAAACCTCTGCTGCA
Downstream 100 bases:
>100_bases GAATCAGTTCATGTAAATGAGGTTATTGACAAAGTGCCCGTAGCGAAGTGAATAGCAGCAAATAAAGACGCCATAAATTG AATGGCTAAAAAGAAGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Family Protein; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Including Glyoxylase; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Beta-Lactamase; Twin-Arginine Translocation Pathway Signal; Exported Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Family Protein; Hydrolase; Metallo-Beta-Lactamase Protein; Signal Peptide; Beta-Lactamase-Like Protein
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MILSMIRSIYATNNCSLSGFSIDICNLLSITYPTVNRTSNMLNKMLLQITFASLVTASAIATAATTEPLKMEVYNPGEKS IFPVSSEIISGKNEVVLIDAQFQRNDAEALVKKIQQSGKKLTTIYISQADPDFYFGLDVIAKAFPQAKVIATPQTIEEIK ATKDGKMAYWGPILKENAPTAVIIPQPLQGKSFTVDGQQIEVEGLDGPSPEKTFVWIPSLKAVVGGVAVSGNIHLWVADT QTPESRENWLTTLEKIKALKPAIVVPGHFLDNAPQTLESVTFTQNYLTTLNAEIPKAKDSAELIAVMKKHYPELKDESSL ELSAKVLKNEMKWPQ
Sequences:
>Translated_335_residues MILSMIRSIYATNNCSLSGFSIDICNLLSITYPTVNRTSNMLNKMLLQITFASLVTASAIATAATTEPLKMEVYNPGEKS IFPVSSEIISGKNEVVLIDAQFQRNDAEALVKKIQQSGKKLTTIYISQADPDFYFGLDVIAKAFPQAKVIATPQTIEEIK ATKDGKMAYWGPILKENAPTAVIIPQPLQGKSFTVDGQQIEVEGLDGPSPEKTFVWIPSLKAVVGGVAVSGNIHLWVADT QTPESRENWLTTLEKIKALKPAIVVPGHFLDNAPQTLESVTFTQNYLTTLNAEIPKAKDSAELIAVMKKHYPELKDESSL ELSAKVLKNEMKWPQ >Mature_335_residues MILSMIRSIYATNNCSLSGFSIDICNLLSITYPTVNRTSNMLNKMLLQITFASLVTASAIATAATTEPLKMEVYNPGEKS IFPVSSEIISGKNEVVLIDAQFQRNDAEALVKKIQQSGKKLTTIYISQADPDFYFGLDVIAKAFPQAKVIATPQTIEEIK ATKDGKMAYWGPILKENAPTAVIIPQPLQGKSFTVDGQQIEVEGLDGPSPEKTFVWIPSLKAVVGGVAVSGNIHLWVADT QTPESRENWLTTLEKIKALKPAIVVPGHFLDNAPQTLESVTFTQNYLTTLNAEIPKAKDSAELIAVMKKHYPELKDESSL ELSAKVLKNEMKWPQ
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36757; Mature: 36757
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILSMIRSIYATNNCSLSGFSIDICNLLSITYPTVNRTSNMLNKMLLQITFASLVTASAI CHHHHHHHHHHCCCCCCCCCEEEHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ATAATTEPLKMEVYNPGEKSIFPVSSEIISGKNEVVLIDAQFQRNDAEALVKKIQQSGKK HHHCCCCCEEEEEECCCCCCEECCHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCE LTTIYISQADPDFYFGLDVIAKAFPQAKVIATPQTIEEIKATKDGKMAYWGPILKENAPT EEEEEEECCCCCEEECHHHHHHHCCCCEEEECHHHHHHHHCCCCCCEEEECCHHCCCCCE AVIIPQPLQGKSFTVDGQQIEVEGLDGPSPEKTFVWIPSLKAVVGGVAVSGNIHLWVADT EEEECCCCCCCEEEECCCEEEEECCCCCCCCCEEEECCCHHHHHCCEEEECCEEEEEECC QTPESRENWLTTLEKIKALKPAIVVPGHFLDNAPQTLESVTFTQNYLTTLNAEIPKAKDS CCCCHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH AELIAVMKKHYPELKDESSLELSAKVLKNEMKWPQ HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MILSMIRSIYATNNCSLSGFSIDICNLLSITYPTVNRTSNMLNKMLLQITFASLVTASAI CHHHHHHHHHHCCCCCCCCCEEEHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ATAATTEPLKMEVYNPGEKSIFPVSSEIISGKNEVVLIDAQFQRNDAEALVKKIQQSGKK HHHCCCCCEEEEEECCCCCCEECCHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCE LTTIYISQADPDFYFGLDVIAKAFPQAKVIATPQTIEEIKATKDGKMAYWGPILKENAPT EEEEEEECCCCCEEECHHHHHHHCCCCEEEECHHHHHHHHCCCCCCEEEECCHHCCCCCE AVIIPQPLQGKSFTVDGQQIEVEGLDGPSPEKTFVWIPSLKAVVGGVAVSGNIHLWVADT EEEECCCCCCCEEEECCCEEEEECCCCCCCCCEEEECCCHHHHHCCEEEECCEEEEEECC QTPESRENWLTTLEKIKALKPAIVVPGHFLDNAPQTLESVTFTQNYLTTLNAEIPKAKDS CCCCHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH AELIAVMKKHYPELKDESSLELSAKVLKNEMKWPQ HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA