| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127044
Identifier: 22127044
GI number: 22127044
Start: 3487626
End: 3488096
Strand: Reverse
Name: 22127044
Synonym: y3168
Alternate gene names: NA
Gene position: 3488096-3487626 (Counterclockwise)
Preceding gene: 22127045
Following gene: 22127043
Centisome position: 75.82
GC content: 48.2
Gene sequence:
>471_bases ATGACGCAGGTATTTCAACGAGGCAGCAGTACCCTGGCGGCGGTTATGACACTTTTTTCTTTGGGATTATTTTGGCTATC AGCGATACATCGGCAATTAGACAATATCCAGCAAATTACCGGAGAGGAACAACGCTATTTACGGGCTTACAATCAGGCTG AATCATCACTCAACTGGGGTGTCAGCCAGCGCTGGGCGCTCAGAATACCTTGGCGGGTAGGTTCAGCATGGCATTGCATG GCACATCAGGAGCTCGGCTTAAAAGCTTGCGTTAAGCGGTCATCACTGGCGGGTTTTTTTATTCTCAAAGGAGAAAGTCT TCCGCTTGGGTCGCTCCCTCCGCTGATGCTTTACCAACGTGTTAAACTGAAGGCAGTTACAGGAAGTTCGGGGAATTATC AGTTGATTGACACGCCTCATGGTTGGTTGGATTTTTGCCCTGATAAGGATGCACAGTTTTGCCTCGATTAA
Upstream 100 bases:
>100_bases CTCTGTCTGGGCAACTTTTCAAATTGCGGCTTGTGGGGCATAAAACGGGTAATCCAGCTATCCACCATCAGGTGACTTAC CTTATCCGTGGGAATAACGT
Downstream 100 bases:
>100_bases TAACCAAACACGCTTATGGACAAACTATTTCAGTGGAGACAGGCGGTTTCAACCTACGTCACCTGCGTGGATTCAGCTTA CTGGAAGTTTTGATTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTQVFQRGSSTLAAVMTLFSLGLFWLSAIHRQLDNIQQITGEEQRYLRAYNQAESSLNWGVSQRWALRIPWRVGSAWHCM AHQELGLKACVKRSSLAGFFILKGESLPLGSLPPLMLYQRVKLKAVTGSSGNYQLIDTPHGWLDFCPDKDAQFCLD
Sequences:
>Translated_156_residues MTQVFQRGSSTLAAVMTLFSLGLFWLSAIHRQLDNIQQITGEEQRYLRAYNQAESSLNWGVSQRWALRIPWRVGSAWHCM AHQELGLKACVKRSSLAGFFILKGESLPLGSLPPLMLYQRVKLKAVTGSSGNYQLIDTPHGWLDFCPDKDAQFCLD >Mature_155_residues TQVFQRGSSTLAAVMTLFSLGLFWLSAIHRQLDNIQQITGEEQRYLRAYNQAESSLNWGVSQRWALRIPWRVGSAWHCMA HQELGLKACVKRSSLAGFFILKGESLPLGSLPPLMLYQRVKLKAVTGSSGNYQLIDTPHGWLDFCPDKDAQFCLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17618; Mature: 17486
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVFQRGSSTLAAVMTLFSLGLFWLSAIHRQLDNIQQITGEEQRYLRAYNQAESSLNWG CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC VSQRWALRIPWRVGSAWHCMAHQELGLKACVKRSSLAGFFILKGESLPLGSLPPLMLYQR CCCCEEEEECEECCCEEEEHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHH VKLKAVTGSSGNYQLIDTPHGWLDFCPDKDAQFCLD HHEEEEECCCCCEEEEECCCCCEECCCCCCCCCCCC >Mature Secondary Structure TQVFQRGSSTLAAVMTLFSLGLFWLSAIHRQLDNIQQITGEEQRYLRAYNQAESSLNWG CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC VSQRWALRIPWRVGSAWHCMAHQELGLKACVKRSSLAGFFILKGESLPLGSLPPLMLYQR CCCCEEEEECEECCCEEEEHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHH VKLKAVTGSSGNYQLIDTPHGWLDFCPDKDAQFCLD HHEEEEECCCCCEEEEECCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA