| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127043
Identifier: 22127043
GI number: 22127043
Start: 3487228
End: 3487638
Strand: Reverse
Name: 22127043
Synonym: y3167
Alternate gene names: NA
Gene position: 3487638-3487228 (Counterclockwise)
Preceding gene: 22127044
Following gene: 22127042
Centisome position: 75.81
GC content: 47.45
Gene sequence:
>411_bases TTGCCTCGATTAATAACCAAACACGCTTATGGACAAACTATTTCAGTGGAGACAGGCGGTTTCAACCTACGTCACCTGCG TGGATTCAGCTTACTGGAAGTTTTGATTGCCGCATTATTTTTCTCAATCTCACTACTGGGGCTACTGCAATACCATCAGG CACTTTTACAGGGCTTTGCCTCCTCATGGCAACAACGGCAAGCCTGGTCGTGGTTACATCAATATATGGAGAGTCAGAGC GGTACAGACCCCGAAGAACGGTGGGCACCTGAAGTGAAACCAGGCTGGCACTATCGCCAATTTATCGATCGCATTGAGGG GGATTGCCGGGAATTTAGCGTTAAGTTGATAACCCGCCAAGACTCGCCAGTAGAATTAAGCCGATGGTTTTGTTCAACTG AGATGATTTAG
Upstream 100 bases:
>100_bases GTGTTAAACTGAAGGCAGTTACAGGAAGTTCGGGGAATTATCAGTTGATTGACACGCCTCATGGTTGGTTGGATTTTTGC CCTGATAAGGATGCACAGTT
Downstream 100 bases:
>100_bases GGTATGTATTACCGATACCTGTTGCGCAGACTCATTATCAAGTTAGAGTATTCAACGTCAGGAACTATCCATCAGCGATA ATAAGTTGATGCATCACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Prepilin Peptidase Dependent Protein C
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MPRLITKHAYGQTISVETGGFNLRHLRGFSLLEVLIAALFFSISLLGLLQYHQALLQGFASSWQQRQAWSWLHQYMESQS GTDPEERWAPEVKPGWHYRQFIDRIEGDCREFSVKLITRQDSPVELSRWFCSTEMI
Sequences:
>Translated_136_residues MPRLITKHAYGQTISVETGGFNLRHLRGFSLLEVLIAALFFSISLLGLLQYHQALLQGFASSWQQRQAWSWLHQYMESQS GTDPEERWAPEVKPGWHYRQFIDRIEGDCREFSVKLITRQDSPVELSRWFCSTEMI >Mature_135_residues PRLITKHAYGQTISVETGGFNLRHLRGFSLLEVLIAALFFSISLLGLLQYHQALLQGFASSWQQRQAWSWLHQYMESQSG TDPEERWAPEVKPGWHYRQFIDRIEGDCREFSVKLITRQDSPVELSRWFCSTEMI
Specific function: Unknown
COG id: COG4967
COG function: function code NU; Tfp pilus assembly protein PilV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15919; Mature: 15788
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLITKHAYGQTISVETGGFNLRHLRGFSLLEVLIAALFFSISLLGLLQYHQALLQGFA CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSWQQRQAWSWLHQYMESQSGTDPEERWAPEVKPGWHYRQFIDRIEGDCREFSVKLITRQ HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHEECC DSPVELSRWFCSTEMI CCCHHHHHHHHHHCCC >Mature Secondary Structure PRLITKHAYGQTISVETGGFNLRHLRGFSLLEVLIAALFFSISLLGLLQYHQALLQGFA CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSWQQRQAWSWLHQYMESQSGTDPEERWAPEVKPGWHYRQFIDRIEGDCREFSVKLITRQ HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHEECC DSPVELSRWFCSTEMI CCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA