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The map label for this gene is yqcC [C]

Identifier: 22127020

GI number: 22127020

Start: 3456248

End: 3456625

Strand: Reverse

Name: yqcC [C]

Synonym: y3144

Alternate gene names: 22127020

Gene position: 3456625-3456248 (Counterclockwise)

Preceding gene: 22127021

Following gene: 22127019

Centisome position: 75.13

GC content: 48.15

Gene sequence:

>378_bases
TTGAAGGTGCCGGTAAGTGGCAATTTTTGGGTTGAGAGCATAATCATGAGTACAGAAAATAAGGTGCGTCAAAGCTTACA
GGATATTGAGTTTGCCATGCGAGAGACTGACCTCTGGCAAACCGTCCCACCGGAAGCAGAAGCTTTTGAGAGTAACGAGC
CTTTTAGTATTGATACTATGGCGGCAGAGCAGTGGCTACAGTGGGTGTTTCTCCCCCGGATGTATGCATTGCTGGAGCTA
AATGGCCCGTTCCCCACCCGTTTTGCTATTACGCCGTATTTTGAAGAGGCTCTGAGCGGTGATGGGCGGCCAGATTACTC
GGCGCTTTTGGCACAATTACGGTGCCTTGATGATCTGTTGAATAAAGAAAGTGAATAA

Upstream 100 bases:

>100_bases
TGTTTTTTTGTTTTGTTGTATAGATTTTGTCTCGCCTGAATCCATTGCTGATGGCGTTAATTTGGGCATATTCTCCCTTC
AATGGTATGCTTGCCCACCG

Downstream 100 bases:

>100_bases
TGCTGGAAATTATCTATCAAGATGAACACATTGTTGCGGTGAATAAGCCTGCCGGTTGGTTAGTGCATCGTAGTTGGTTG
GACCGCAATGAAACGGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKVPVSGNFWVESIIMSTENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTMAAEQWLQWVFLPRMYALLEL
NGPFPTRFAITPYFEEALSGDGRPDYSALLAQLRCLDDLLNKESE

Sequences:

>Translated_125_residues
MKVPVSGNFWVESIIMSTENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTMAAEQWLQWVFLPRMYALLEL
NGPFPTRFAITPYFEEALSGDGRPDYSALLAQLRCLDDLLNKESE
>Mature_125_residues
MKVPVSGNFWVESIIMSTENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTMAAEQWLQWVFLPRMYALLEL
NGPFPTRFAITPYFEEALSGDGRPDYSALLAQLRCLDDLLNKESE

Specific function: Unknown

COG id: COG3098

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqcC [H]

Homologues:

Organism=Escherichia coli, GI1789156, Length=109, Percent_Identity=41.2844036697248, Blast_Score=84, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007384 [H]

Pfam domain/function: PF04287 DUF446 [H]

EC number: NA

Molecular weight: Translated: 14411; Mature: 14411

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVPVSGNFWVESIIMSTENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHH
AAEQWLQWVFLPRMYALLELNGPFPTRFAITPYFEEALSGDGRPDYSALLAQLRCLDDLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NKESE
CCCCC
>Mature Secondary Structure
MKVPVSGNFWVESIIMSTENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHH
AAEQWLQWVFLPRMYALLELNGPFPTRFAITPYFEEALSGDGRPDYSALLAQLRCLDDLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NKESE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]