| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is gloB [H]
Identifier: 22126973
GI number: 22126973
Start: 3406842
End: 3407684
Strand: Direct
Name: gloB [H]
Synonym: y3097
Alternate gene names: 22126973
Gene position: 3406842-3407684 (Clockwise)
Preceding gene: 22126971
Following gene: 229013125
Centisome position: 74.05
GC content: 43.89
Gene sequence:
>843_bases ATGCAGGTGTCTCAATATTTTGGCGTATTTGCGCTGGTTTCATATTTTATTATCTTCTTTCAAGCTGTTGCCAACGAGAG GTATCTAATGAATCTTATCAGCATTCCGGCATTTCAAGACAATTACATTTGGCTACTGGCTAATCGACAAAAACACTGTG TTATCGTTGACCCTGGTGAGTCAGCGCCAGTTCTAGCCACGCTGGCCCAAGGCCAATATGTGCCACAAGCCATATTATTG ACCCATCATCATAACGATCACGTGGGGGGGGTTGCTGATTTACGCCACCATTTCCCCGATATTCCCGTCTATGGGCCACA AGAAACTGCGAAAAAAGGGGCCACCGTCATTGTTAATGATGGCGATAGCCTCACCATTGCCGGACAAAATTACACCATTA TAGCCGTCCCCGGCCATACTCTAGGTCATATCGCATACTACAGTTCTCCTTATCTTTTTTGTGGAGACACCCTGTTTTCT GCTGGCTGTGGGCGACTCTTAGAAGGCACACCAGAGCAAATGTACGCTTCAATTCAACGACTCGCGCAGTTACCCGACGA AACCTTAATATGCTGCGCACATGAATATACTCTCTCAAATCTTAAGTTTGCCCACGCAATTTTGCCTGCTGATCAAGATA TTGCTACATATCAACAACAAATTGAGCAATTACGGTCAAAAAACCTACCTAGCCTGCCCGTAAAATTGCAATTTGAGCGC AAAATTAATGTTTTTTTACGTTGCAATGACATTGATTTACAAAGAAAAATAGGAACAACTTCGCCTCCAGACTCACTTGT CTCTGTTTTCTGCGAATTACGCTCCCGAAAAGACAGCTTTTGA
Upstream 100 bases:
>100_bases ACCTTCAGCAAGTGAAAACCAAAAAATTTTGGCCACCAGGGTTGCAGTTGCTGTTCAAGCGCCGCGCGGTAATATTCCCC CCAAGGTAATTCAGCCCAAG
Downstream 100 bases:
>100_bases GCTTTTAGTTGTGTTTTTTATCGAAGCAAAGTATGATTGCTCGTCTTTTAAGCAACCACATTGACACACACATGAAGACC AAAGCGATACTTCTCGCCTC
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MQVSQYFGVFALVSYFIIFFQAVANERYLMNLISIPAFQDNYIWLLANRQKHCVIVDPGESAPVLATLAQGQYVPQAILL THHHNDHVGGVADLRHHFPDIPVYGPQETAKKGATVIVNDGDSLTIAGQNYTIIAVPGHTLGHIAYYSSPYLFCGDTLFS AGCGRLLEGTPEQMYASIQRLAQLPDETLICCAHEYTLSNLKFAHAILPADQDIATYQQQIEQLRSKNLPSLPVKLQFER KINVFLRCNDIDLQRKIGTTSPPDSLVSVFCELRSRKDSF
Sequences:
>Translated_280_residues MQVSQYFGVFALVSYFIIFFQAVANERYLMNLISIPAFQDNYIWLLANRQKHCVIVDPGESAPVLATLAQGQYVPQAILL THHHNDHVGGVADLRHHFPDIPVYGPQETAKKGATVIVNDGDSLTIAGQNYTIIAVPGHTLGHIAYYSSPYLFCGDTLFS AGCGRLLEGTPEQMYASIQRLAQLPDETLICCAHEYTLSNLKFAHAILPADQDIATYQQQIEQLRSKNLPSLPVKLQFER KINVFLRCNDIDLQRKIGTTSPPDSLVSVFCELRSRKDSF >Mature_280_residues MQVSQYFGVFALVSYFIIFFQAVANERYLMNLISIPAFQDNYIWLLANRQKHCVIVDPGESAPVLATLAQGQYVPQAILL THHHNDHVGGVADLRHHFPDIPVYGPQETAKKGATVIVNDGDSLTIAGQNYTIIAVPGHTLGHIAYYSSPYLFCGDTLFS AGCGRLLEGTPEQMYASIQRLAQLPDETLICCAHEYTLSNLKFAHAILPADQDIATYQQQIEQLRSKNLPSLPVKLQFER KINVFLRCNDIDLQRKIGTTSPPDSLVSVFCELRSRKDSF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI14150041, Length=255, Percent_Identity=32.9411764705882, Blast_Score=138, Evalue=4e-33, Organism=Homo sapiens, GI94538320, Length=261, Percent_Identity=34.0996168582375, Blast_Score=137, Evalue=8e-33, Organism=Homo sapiens, GI94538322, Length=261, Percent_Identity=34.0996168582375, Blast_Score=137, Evalue=9e-33, Organism=Homo sapiens, GI21703352, Length=262, Percent_Identity=33.587786259542, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI116642887, Length=262, Percent_Identity=33.587786259542, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI46361987, Length=193, Percent_Identity=35.2331606217617, Blast_Score=115, Evalue=3e-26, Organism=Escherichia coli, GI1786406, Length=251, Percent_Identity=57.3705179282869, Blast_Score=293, Evalue=8e-81, Organism=Escherichia coli, GI1787158, Length=208, Percent_Identity=27.8846153846154, Blast_Score=73, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17536925, Length=219, Percent_Identity=36.986301369863, Blast_Score=117, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6320478, Length=261, Percent_Identity=30.2681992337165, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6324614, Length=261, Percent_Identity=28.3524904214559, Blast_Score=83, Evalue=6e-17, Organism=Drosophila melanogaster, GI21356335, Length=262, Percent_Identity=34.7328244274809, Blast_Score=161, Evalue=4e-40, Organism=Drosophila melanogaster, GI24667703, Length=262, Percent_Identity=34.7328244274809, Blast_Score=161, Evalue=6e-40, Organism=Drosophila melanogaster, GI24667711, Length=262, Percent_Identity=34.7328244274809, Blast_Score=160, Evalue=7e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 31270; Mature: 31270
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVSQYFGVFALVSYFIIFFQAVANERYLMNLISIPAFQDNYIWLLANRQKHCVIVDPGE CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCC SAPVLATLAQGQYVPQAILLTHHHNDHVGGVADLRHHFPDIPVYGPQETAKKGATVIVND CCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHCCCEEEEEC GDSLTIAGQNYTIIAVPGHTLGHIAYYSSPYLFCGDTLFSAGCGRLLEGTPEQMYASIQR CCEEEEECCCEEEEEECCCCHHHEEEECCCEEEECHHHHHHCCCHHHCCCHHHHHHHHHH LAQLPDETLICCAHEYTLSNLKFAHAILPADQDIATYQQQIEQLRSKNLPSLPVKLQFER HHHCCCCEEEEEEEHHHHHCCEEEHEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC KINVFLRCNDIDLQRKIGTTSPPDSLVSVFCELRSRKDSF EEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQVSQYFGVFALVSYFIIFFQAVANERYLMNLISIPAFQDNYIWLLANRQKHCVIVDPGE CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCC SAPVLATLAQGQYVPQAILLTHHHNDHVGGVADLRHHFPDIPVYGPQETAKKGATVIVND CCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHCCCEEEEEC GDSLTIAGQNYTIIAVPGHTLGHIAYYSSPYLFCGDTLFSAGCGRLLEGTPEQMYASIQR CCEEEEECCCEEEEEECCCCHHHEEEECCCEEEECHHHHHHCCCHHHCCCHHHHHHHHHH LAQLPDETLICCAHEYTLSNLKFAHAILPADQDIATYQQQIEQLRSKNLPSLPVKLQFER HHHCCCCEEEEEEEHHHHHCCEEEHEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC KINVFLRCNDIDLQRKIGTTSPPDSLVSVFCELRSRKDSF EEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA