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The map label for this gene is rcsD [H]

Identifier: 22126846

GI number: 22126846

Start: 3269981

End: 3270553

Strand: Direct

Name: rcsD [H]

Synonym: y2969

Alternate gene names: 22126846

Gene position: 3269981-3270553 (Clockwise)

Preceding gene: 22126845

Following gene: 22126847

Centisome position: 71.07

GC content: 39.09

Gene sequence:

>573_bases
TTGTTAAATTCATTTGGTGCTAACTGCATTCTCACCGATGAACGCCTACCAGGGCGGGATTATGATGTTACAATAACGGA
TAATCCGCAACATTATGATAATTACACATTATTGCTCGCGGCGGATGAAACGGGGTTTCACCAGTTACAAAACAATTATA
TACGGGCAAATTACAATTTAAGCAGCGCGGTTATTGATTCAATATTATTATTAATCGAGCGGCGAATTTTATCTGAACAA
TCGCAACAAAAGGTTGAGTACATTACAGAAGATGATATAAACCTCTATGAGAGGCAACTAAAAACCAGTGACTATTATTC
CTTATTTGTCGAGACAGTACCGGTAGATCTGAAGAAACTGTATACTGAACTTCAGCAAAGTGATTTAACATCACTTTCGC
AAACCGTACATCGATTAAAAGGCGTATTTGCCATGCTGAACCTGGTTCTCGGCAAGCAGCTATGTGAAACATTAGAACAG
CATATCGCAGATGGCGATCGGTTGAAGATCGAAAATAGCATCAGTCAGATTGATTTTTTCATCACCAGACTGTTGCAGGA
AGGTAACCCATAA

Upstream 100 bases:

>100_bases
CGTTAAAAATGAACAACAAGACACGCAAGAAAAATTACTGGATGGTGTCACAGTACTATTAGATATAACCTCAGAAGAAG
TACGCTCGATCATTACAATA

Downstream 100 bases:

>100_bases
CCATGAACAACCTTAATGTAATTATTGCTGATGACCATCCAATTGTTTTGTTTGGCATCCGAAAGTCGCTTGAGCAAATT
GAATGGGTAAACGTTGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphotransfer intermediate RcsD [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLNSFGANCILTDERLPGRDYDVTITDNPQHYDNYTLLLAADETGFHQLQNNYIRANYNLSSAVIDSILLLIERRILSEQ
SQQKVEYITEDDINLYERQLKTSDYYSLFVETVPVDLKKLYTELQQSDLTSLSQTVHRLKGVFAMLNLVLGKQLCETLEQ
HIADGDRLKIENSISQIDFFITRLLQEGNP

Sequences:

>Translated_190_residues
MLNSFGANCILTDERLPGRDYDVTITDNPQHYDNYTLLLAADETGFHQLQNNYIRANYNLSSAVIDSILLLIERRILSEQ
SQQKVEYITEDDINLYERQLKTSDYYSLFVETVPVDLKKLYTELQQSDLTSLSQTVHRLKGVFAMLNLVLGKQLCETLEQ
HIADGDRLKIENSISQIDFFITRLLQEGNP
>Mature_190_residues
MLNSFGANCILTDERLPGRDYDVTITDNPQHYDNYTLLLAADETGFHQLQNNYIRANYNLSSAVIDSILLLIERRILSEQ
SQQKVEYITEDDINLYERQLKTSDYYSLFVETVPVDLKKLYTELQQSDLTSLSQTVHRLKGVFAMLNLVLGKQLCETLEQ
HIADGDRLKIENSISQIDFFITRLLQEGNP

Specific function: May serves as a phosphotransfer intermediate between RcsC and RcsB. It may acquire a phosphoryl group at His-842 from RcsC 'Asp-866' and transmit it to 'Asp-56' of RcsB [H]

COG id: COG2198

COG function: function code T; FOG: HPt domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HPt domain [H]

Homologues:

Organism=Escherichia coli, GI1788545, Length=185, Percent_Identity=47.5675675675676, Blast_Score=161, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR008207
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c; PF01627 Hpt [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 21911; Mature: 21911

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS50894 HPT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSFGANCILTDERLPGRDYDVTITDNPQHYDNYTLLLAADETGFHQLQNNYIRANYNL
CCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHCCEEEECCCH
SSAVIDSILLLIERRILSEQSQQKVEYITEDDINLYERQLKTSDYYSLFVETVPVDLKKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHH
YTELQQSDLTSLSQTVHRLKGVFAMLNLVLGKQLCETLEQHIADGDRLKIENSISQIDFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
ITRLLQEGNP
HHHHHHCCCC
>Mature Secondary Structure
MLNSFGANCILTDERLPGRDYDVTITDNPQHYDNYTLLLAADETGFHQLQNNYIRANYNL
CCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHCCEEEECCCH
SSAVIDSILLLIERRILSEQSQQKVEYITEDDINLYERQLKTSDYYSLFVETVPVDLKKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHH
YTELQQSDLTSLSQTVHRLKGVFAMLNLVLGKQLCETLEQHIADGDRLKIENSISQIDFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
ITRLLQEGNP
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2404948; 7984428; 11758943; 11309126 [H]