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The map label for this gene is rcsD [H]

Identifier: 22126845

GI number: 22126845

Start: 3267861

End: 3269813

Strand: Direct

Name: rcsD [H]

Synonym: y2968

Alternate gene names: 22126845

Gene position: 3267861-3269813 (Clockwise)

Preceding gene: 22126844

Following gene: 22126846

Centisome position: 71.03

GC content: 43.01

Gene sequence:

>1953_bases
ATGCAAAACAATTCGTCTACCCACTCAGCGGCTAACATTACACGTTACTTCTGGCTATTTATCGTACTTCTGCTCATGAC
TGTTGGGCTATATGCCTATAACTATACCAATGCTTATCTGACTGAAAAGAAGCATGCTTTAACGAATATCGCTAACGGTT
TGCAACAACGCATTGATGACTATCGATATCATACTTACCAAATATATGATTTAGTCAATAATCCGATCAAAGCAAGTGAG
CCCCCTCCTGTGGTGCAGGAAACCCGCCTGCGCCCTGACGTTTACTATATTGAAAAGCCTCGCAGAAAGACTGACGCTAT
CATTTTTGGTAACCACGAGCCTGCAACGCTGACCATGGCATTACAGATATCTGACTATCTTGATAACCTGTGGGGGCCGC
AAAATGACACTTACTCGATGTACTATCTTAACGGGCAGGACAATAGCTTACTCCTGATTACGACTCAGGCACTAAAAGAG
GTCACATCACGCTTTAAAGAGAGCTACCTTACTGCCTTTGCTGAATCGCGACGGGCGGAAATGCTACAGCAGGTCAATAC
GTTGGATGAGCGGGAGAGCTTCTCGCCCTTACGCAAATTGCGCTTCCAAAATGCCTACTATTTCACGCTAAGAACCACCT
TTAACCGTCCTGGCCATTTAGCCACCGTGATCGCCTTTGATTTACCGATCAATGATTTAATTCCACCGAACATGGCACGT
TCGAACTTCCTGCTTCAACCAGATAAAGTGCCACTCAATGAGGGGGCTACCCCCGAAGATATTGCGGCAACCAGCGTGTC
ACTGAACGGCTCATGGGTTGAGTTCTCCGCACCACTGGCAAATGTCACACTGAAAATTATTTATCGTGTACCGGTTAGTC
ATTTGATTATCGACTTATTAATAAACAACTTTTGGTTAATCCTAGCCAATATTGTGTTATTAGCGCTAACCATTCTGGCC
GCCTATTTTGTCCGCCACCAATATGGTCGTCCAAGTGCTGATGTGACCGGACAATTAGAAGCTCAGAGATTGTTGAGTCA
GGAGATCATTACCAACCTACCGCAAGGCTTATTAATTTATGACTTCAGCAACAGCACTGTCATTGCCAGCAACAAGATAG
CGGAAAATCTACTGCCTCACCTGAATCTACAAAAAATTGCCACTATGGCAGAGCAGCACCACGGTGTGATTCAAGGGACG
GTTAATAACGAAGTTTATGAAATCCACATGTTCCGTAGCCAGATCTCACCAGAGACGTATCTTTTTCTACTTAATGATCA
GGATAAGGAAGTCTTGGTGAATAAGAAATTGCAGCAAGCAAGGCGTGAGTACGATAAAAATCTACAAGCGCGGAAACTGA
TGTTGCACAACCTGGGGATTGAACTTGGCCAACCGGTCCACCACCTGAGCCAACTTGTTCGTACATTACAGGACACTACC
GATTTGCAACAACAGCATGACATTAAGACCAAGCTGGTTGAGCAATCAGCAACTATCCTTGAACTGATTGATAACATCAC
GTTACTGACTAAGCTGGAAACACAAGATTGGCAAACAGAACAACAGGTCTTCTCTTTATCAACCTTAATCGATAACCTGC
TACTGGATCTGCTCCCCTCGATTAATCGGAAAGGCTTAAATCTGTTTAATCATTTTCATGTCAGCCTTGACCAAATTTAT
CTAGGTGATGAAAAGGTATTACGTAAAATACTTTCGTTGTTGCTGAATTATTCTATCGTTACCACAGCTTACGGAAAAAT
TACCCTCAATGTAGATCATGAACCAGGACATCCGGAACAATTGGTTATTCAAATAATGGATACTGGCGCGGGTATTTCTG
ATGAAGAGATAGGTAATCTTAATTATCCTTTCCTTAGCCAAGCATTGGCCGACAGATACAATCATGGTTCGGGGCTGACA
TTTTTTTATGTAACCAATTATGTAAAAAATTAA

Upstream 100 bases:

>100_bases
GTCTATCGGTTGCTTTTGGCTGTGTAGCACTTCTGTTATTAACCGTTGCTGCCAGCGCCAGAGCCGTCACGCGCTAACCA
AGGGAATCGGCATTATCGTT

Downstream 100 bases:

>100_bases
ACGGCCAATTAGAGATTCGCAGTAAAGTAGATATAGGTACACGCTATACTATCCGGTTAACAATAGCCGTTAAAAATGAA
CAACAAGACACGCAAGAAAA

Product: two-component sensor protein

Products: NA

Alternate protein names: Phosphotransfer intermediate RcsD [H]

Number of amino acids: Translated: 650; Mature: 650

Protein sequence:

>650_residues
MQNNSSTHSAANITRYFWLFIVLLLMTVGLYAYNYTNAYLTEKKHALTNIANGLQQRIDDYRYHTYQIYDLVNNPIKASE
PPPVVQETRLRPDVYYIEKPRRKTDAIIFGNHEPATLTMALQISDYLDNLWGPQNDTYSMYYLNGQDNSLLLITTQALKE
VTSRFKESYLTAFAESRRAEMLQQVNTLDERESFSPLRKLRFQNAYYFTLRTTFNRPGHLATVIAFDLPINDLIPPNMAR
SNFLLQPDKVPLNEGATPEDIAATSVSLNGSWVEFSAPLANVTLKIIYRVPVSHLIIDLLINNFWLILANIVLLALTILA
AYFVRHQYGRPSADVTGQLEAQRLLSQEIITNLPQGLLIYDFSNSTVIASNKIAENLLPHLNLQKIATMAEQHHGVIQGT
VNNEVYEIHMFRSQISPETYLFLLNDQDKEVLVNKKLQQARREYDKNLQARKLMLHNLGIELGQPVHHLSQLVRTLQDTT
DLQQQHDIKTKLVEQSATILELIDNITLLTKLETQDWQTEQQVFSLSTLIDNLLLDLLPSINRKGLNLFNHFHVSLDQIY
LGDEKVLRKILSLLLNYSIVTTAYGKITLNVDHEPGHPEQLVIQIMDTGAGISDEEIGNLNYPFLSQALADRYNHGSGLT
FFYVTNYVKN

Sequences:

>Translated_650_residues
MQNNSSTHSAANITRYFWLFIVLLLMTVGLYAYNYTNAYLTEKKHALTNIANGLQQRIDDYRYHTYQIYDLVNNPIKASE
PPPVVQETRLRPDVYYIEKPRRKTDAIIFGNHEPATLTMALQISDYLDNLWGPQNDTYSMYYLNGQDNSLLLITTQALKE
VTSRFKESYLTAFAESRRAEMLQQVNTLDERESFSPLRKLRFQNAYYFTLRTTFNRPGHLATVIAFDLPINDLIPPNMAR
SNFLLQPDKVPLNEGATPEDIAATSVSLNGSWVEFSAPLANVTLKIIYRVPVSHLIIDLLINNFWLILANIVLLALTILA
AYFVRHQYGRPSADVTGQLEAQRLLSQEIITNLPQGLLIYDFSNSTVIASNKIAENLLPHLNLQKIATMAEQHHGVIQGT
VNNEVYEIHMFRSQISPETYLFLLNDQDKEVLVNKKLQQARREYDKNLQARKLMLHNLGIELGQPVHHLSQLVRTLQDTT
DLQQQHDIKTKLVEQSATILELIDNITLLTKLETQDWQTEQQVFSLSTLIDNLLLDLLPSINRKGLNLFNHFHVSLDQIY
LGDEKVLRKILSLLLNYSIVTTAYGKITLNVDHEPGHPEQLVIQIMDTGAGISDEEIGNLNYPFLSQALADRYNHGSGLT
FFYVTNYVKN
>Mature_650_residues
MQNNSSTHSAANITRYFWLFIVLLLMTVGLYAYNYTNAYLTEKKHALTNIANGLQQRIDDYRYHTYQIYDLVNNPIKASE
PPPVVQETRLRPDVYYIEKPRRKTDAIIFGNHEPATLTMALQISDYLDNLWGPQNDTYSMYYLNGQDNSLLLITTQALKE
VTSRFKESYLTAFAESRRAEMLQQVNTLDERESFSPLRKLRFQNAYYFTLRTTFNRPGHLATVIAFDLPINDLIPPNMAR
SNFLLQPDKVPLNEGATPEDIAATSVSLNGSWVEFSAPLANVTLKIIYRVPVSHLIIDLLINNFWLILANIVLLALTILA
AYFVRHQYGRPSADVTGQLEAQRLLSQEIITNLPQGLLIYDFSNSTVIASNKIAENLLPHLNLQKIATMAEQHHGVIQGT
VNNEVYEIHMFRSQISPETYLFLLNDQDKEVLVNKKLQQARREYDKNLQARKLMLHNLGIELGQPVHHLSQLVRTLQDTT
DLQQQHDIKTKLVEQSATILELIDNITLLTKLETQDWQTEQQVFSLSTLIDNLLLDLLPSINRKGLNLFNHFHVSLDQIY
LGDEKVLRKILSLLLNYSIVTTAYGKITLNVDHEPGHPEQLVIQIMDTGAGISDEEIGNLNYPFLSQALADRYNHGSGLT
FFYVTNYVKN

Specific function: May serves as a phosphotransfer intermediate between RcsC and RcsB. It may acquire a phosphoryl group at His-842 from RcsC 'Asp-866' and transmit it to 'Asp-56' of RcsB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HPt domain [H]

Homologues:

Organism=Escherichia coli, GI1788545, Length=641, Percent_Identity=46.1778471138846, Blast_Score=546, Evalue=1e-156,
Organism=Escherichia coli, GI145693157, Length=370, Percent_Identity=25.9459459459459, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR008207
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c; PF01627 Hpt [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 74352; Mature: 74352

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNNSSTHSAANITRYFWLFIVLLLMTVGLYAYNYTNAYLTEKKHALTNIANGLQQRIDD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
YRYHTYQIYDLVNNPIKASEPPPVVQETRLRPDVYYIEKPRRKTDAIIFGNHEPATLTMA
HHHHEEEEEEHHCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCEEEECCCCCCEEEEE
LQISDYLDNLWGPQNDTYSMYYLNGQDNSLLLITTQALKEVTSRFKESYLTAFAESRRAE
EEEHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
MLQQVNTLDERESFSPLRKLRFQNAYYFTLRTTFNRPGHLATVIAFDLPINDLIPPNMAR
HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEEEEEEEECCHHCCCCCCCCC
SNFLLQPDKVPLNEGATPEDIAATSVSLNGSWVEFSAPLANVTLKIIYRVPVSHLIIDLL
CCCEECCCCCCCCCCCCCCHHHEEEEECCCCEEEECCCHHHHEEEHEECCCHHHHHHHHH
INNFWLILANIVLLALTILAAYFVRHQYGRPSADVTGQLEAQRLLSQEIITNLPQGLLIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
DFSNSTVIASNKIAENLLPHLNLQKIATMAEQHHGVIQGTVNNEVYEIHMFRSQISPETY
EECCCEEEECHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEHHHHCCCCEE
LFLLNDQDKEVLVNKKLQQARREYDKNLQARKLMLHNLGIELGQPVHHLSQLVRTLQDTT
EEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DLQQQHDIKTKLVEQSATILELIDNITLLTKLETQDWQTEQQVFSLSTLIDNLLLDLLPS
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC
INRKGLNLFNHFHVSLDQIYLGDEKVLRKILSLLLNYSIVTTAYGKITLNVDHEPGHPEQ
CCCCCCHHHHHHEEEEEEEEECCHHHHHHHHHHHHCCHHEEEEEEEEEEEECCCCCCCHH
LVIQIMDTGAGISDEEIGNLNYPFLSQALADRYNHGSGLTFFYVTNYVKN
HHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHCC
>Mature Secondary Structure
MQNNSSTHSAANITRYFWLFIVLLLMTVGLYAYNYTNAYLTEKKHALTNIANGLQQRIDD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
YRYHTYQIYDLVNNPIKASEPPPVVQETRLRPDVYYIEKPRRKTDAIIFGNHEPATLTMA
HHHHEEEEEEHHCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCEEEECCCCCCEEEEE
LQISDYLDNLWGPQNDTYSMYYLNGQDNSLLLITTQALKEVTSRFKESYLTAFAESRRAE
EEEHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
MLQQVNTLDERESFSPLRKLRFQNAYYFTLRTTFNRPGHLATVIAFDLPINDLIPPNMAR
HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEEEEEEEECCHHCCCCCCCCC
SNFLLQPDKVPLNEGATPEDIAATSVSLNGSWVEFSAPLANVTLKIIYRVPVSHLIIDLL
CCCEECCCCCCCCCCCCCCHHHEEEEECCCCEEEECCCHHHHEEEHEECCCHHHHHHHHH
INNFWLILANIVLLALTILAAYFVRHQYGRPSADVTGQLEAQRLLSQEIITNLPQGLLIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
DFSNSTVIASNKIAENLLPHLNLQKIATMAEQHHGVIQGTVNNEVYEIHMFRSQISPETY
EECCCEEEECHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEHHHHCCCCEE
LFLLNDQDKEVLVNKKLQQARREYDKNLQARKLMLHNLGIELGQPVHHLSQLVRTLQDTT
EEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DLQQQHDIKTKLVEQSATILELIDNITLLTKLETQDWQTEQQVFSLSTLIDNLLLDLLPS
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC
INRKGLNLFNHFHVSLDQIYLGDEKVLRKILSLLLNYSIVTTAYGKITLNVDHEPGHPEQ
CCCCCCHHHHHHEEEEEEEEECCHHHHHHHHHHHHCCHHEEEEEEEEEEEECCCCCCCHH
LVIQIMDTGAGISDEEIGNLNYPFLSQALADRYNHGSGLTFFYVTNYVKN
HHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2404948; 7984428; 11758943; 11309126 [H]