| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126807
Identifier: 22126807
GI number: 22126807
Start: 3233842
End: 3233934
Strand: Direct
Name: 22126807
Synonym: y2930
Alternate gene names: NA
Gene position: 3233842-3233934 (Clockwise)
Preceding gene: 22126806
Following gene: 22126808
Centisome position: 70.29
GC content: 51.61
Gene sequence:
>93_bases ATGGCGCTTACAGAAGAACAGAAGGCGCTTTTCGATGCCCTGACGCAATTACAGCGCAGATTCGTTACCGCGCTGCTAGA GGGTGCCAATTAA
Upstream 100 bases:
>100_bases AGCTGGGGGCGCACGTTAACCGATAGTAAGAAATGGTAAGGTTTACTCGCTATCGTGTTAATGAGAAAATGTTATACCAG TTAAACCTTAAGGGGTCGAA
Downstream 100 bases:
>100_bases ACCGAGGCATACCGAACACCTGGCCGCTGTCGCTGAATTATCCACTGGCAATGTCGAGCCGAGCCTGTCATCACATTTAT GTAATGACCGTATCCTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 30; Mature: 29
Protein sequence:
>30_residues MALTEEQKALFDALTQLQRRFVTALLEGAN
Sequences:
>Translated_30_residues MALTEEQKALFDALTQLQRRFVTALLEGAN >Mature_29_residues ALTEEQKALFDALTQLQRRFVTALLEGAN
Specific function: Unknown
COG id: COG3728
COG function: function code L; Phage terminase, small subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3379; Mature: 3248
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTEEQKALFDALTQLQRRFVTALLEGAN CCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALTEEQKALFDALTQLQRRFVTALLEGAN CCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA