| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yliJ [H]
Identifier: 22126748
GI number: 22126748
Start: 3168739
End: 3169461
Strand: Direct
Name: yliJ [H]
Synonym: y2871
Alternate gene names: 22126748
Gene position: 3168739-3169461 (Clockwise)
Preceding gene: 22126747
Following gene: 22126755
Centisome position: 68.87
GC content: 48.13
Gene sequence:
>723_bases ATGATTTTACTCGCACGGTTATCGATATCGGTGACCGGGCATGGAAATTTGTGCTGTTTTCTCTTTGTCGCCATATTTTT TTGTCACGATATAGGGGGTTGCATGCTGACAGTCTGGGGCCGAAATAACTCGACCAATGTCAAAAAAGTGCTGTGGTGCT TGGAAGAACTGGGAATCCCCTATCAGCGCATTGATGTCGGGGGGCAATATGGCAAACTCAATGACCCACAGTACCGCGCG TTAAATCCAAATGGTTTGATCCCCTGCCTGCAAGATAAGGATTTCATCCTGTGGGAATCCAACACCATTGTGCGTTATCT AGCCGCACAATATGGTCAAAATTCACTTTATCTGGCCGATCACCACCAGCGGGCCAGTGCAGAAAAATGGATGGATTGGG CGACATCCAGTGTAGTAGAGCCCTTTAAAGCTGTGTTTATCGGTTTGGTGCGCACCCCACCAGAACAGCAGGATAAAGTG AAAATTGCTCAGGGAATGGAGAAAATGAATACGTTGATGTCCATTGCCAATGACGCGTTGGGGGAACAAGCCTATCTTTC CGGCGATGCCTTTGGCATTGGTGATATTCCGCTGGGCTGCCTGGCCTATGCCTGGTTTAACTTACCGATCGAGCGCCCGG AATTACCGCATTTACAGCGCTGGTATCAGAGCCTGACGCAAAGAATAGCCTTCCAAAAAGTGATTGCGATTGGTTTGAGT TAA
Upstream 100 bases:
>100_bases ATTAATTGATTTAGCGGTTTTGCACCAGTGGGATATCCATCATTGGTAACATCACGGATAGAACAGATAGAACAGATAGA ACTGACATAATAGAAGGCCC
Downstream 100 bases:
>100_bases TACTCTTCTTTTATTCCAAAACACCTTGGCATTGCTGGTCAAAATCCCGAATCACTTACTTATTTTAAAGTCAACAACCA GTAAGTGATTCGGGTAAGTG
Product: transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MILLARLSISVTGHGNLCCFLFVAIFFCHDIGGCMLTVWGRNNSTNVKKVLWCLEELGIPYQRIDVGGQYGKLNDPQYRA LNPNGLIPCLQDKDFILWESNTIVRYLAAQYGQNSLYLADHHQRASAEKWMDWATSSVVEPFKAVFIGLVRTPPEQQDKV KIAQGMEKMNTLMSIANDALGEQAYLSGDAFGIGDIPLGCLAYAWFNLPIERPELPHLQRWYQSLTQRIAFQKVIAIGLS
Sequences:
>Translated_240_residues MILLARLSISVTGHGNLCCFLFVAIFFCHDIGGCMLTVWGRNNSTNVKKVLWCLEELGIPYQRIDVGGQYGKLNDPQYRA LNPNGLIPCLQDKDFILWESNTIVRYLAAQYGQNSLYLADHHQRASAEKWMDWATSSVVEPFKAVFIGLVRTPPEQQDKV KIAQGMEKMNTLMSIANDALGEQAYLSGDAFGIGDIPLGCLAYAWFNLPIERPELPHLQRWYQSLTQRIAFQKVIAIGLS >Mature_240_residues MILLARLSISVTGHGNLCCFLFVAIFFCHDIGGCMLTVWGRNNSTNVKKVLWCLEELGIPYQRIDVGGQYGKLNDPQYRA LNPNGLIPCLQDKDFILWESNTIVRYLAAQYGQNSLYLADHHQRASAEKWMDWATSSVVEPFKAVFIGLVRTPPEQQDKV KIAQGMEKMNTLMSIANDALGEQAYLSGDAFGIGDIPLGCLAYAWFNLPIERPELPHLQRWYQSLTQRIAFQKVIAIGLS
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081789, Length=208, Percent_Identity=48.5576923076923, Blast_Score=197, Evalue=5e-52, Organism=Drosophila melanogaster, GI17864596, Length=190, Percent_Identity=24.7368421052632, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24654975, Length=196, Percent_Identity=27.0408163265306, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654983, Length=214, Percent_Identity=27.1028037383178, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI17864598, Length=186, Percent_Identity=24.1935483870968, Blast_Score=68, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 27000; Mature: 27000
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLARLSISVTGHGNLCCFLFVAIFFCHDIGGCMLTVWGRNNSTNVKKVLWCLEELGIP CEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC YQRIDVGGQYGKLNDPQYRALNPNGLIPCLQDKDFILWESNTIVRYLAAQYGQNSLYLAD EEEEECCCCCCCCCCCCEEEECCCCCEECCCCCCEEEEECCHHHHHHHHHHCCCCEEEEC HHQRASAEKWMDWATSSVVEPFKAVFIGLVRTPPEQQDKVKIAQGMEKMNTLMSIANDAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GEQAYLSGDAFGIGDIPLGCLAYAWFNLPIERPELPHLQRWYQSLTQRIAFQKVIAIGLS CCHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILLARLSISVTGHGNLCCFLFVAIFFCHDIGGCMLTVWGRNNSTNVKKVLWCLEELGIP CEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC YQRIDVGGQYGKLNDPQYRALNPNGLIPCLQDKDFILWESNTIVRYLAAQYGQNSLYLAD EEEEECCCCCCCCCCCCEEEECCCCCEECCCCCCEEEEECCHHHHHHHHHHCCCCEEEEC HHQRASAEKWMDWATSSVVEPFKAVFIGLVRTPPEQQDKVKIAQGMEKMNTLMSIANDAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GEQAYLSGDAFGIGDIPLGCLAYAWFNLPIERPELPHLQRWYQSLTQRIAFQKVIAIGLS CCHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]