| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22126669
Identifier: 22126669
GI number: 22126669
Start: 3089802
End: 3090476
Strand: Reverse
Name: 22126669
Synonym: y2791
Alternate gene names: NA
Gene position: 3090476-3089802 (Counterclockwise)
Preceding gene: 22126673
Following gene: 22126665
Centisome position: 67.17
GC content: 35.56
Gene sequence:
>675_bases ATGAATGAAAATTGGAATTGGTCTTTAGTAGACAAAGTTGTTTACATTAATTTGAAGGAACGTACGGATAGAAATGAGCA CATCAAAAAAGAACTGGAAAAAGTGTGCTTTCCACCTGAAAAAATAATCCGCTTTGAGGCAATAAGAGCAGGGTCAGGTT TTATCGGTTGCGCAAAATCACATCTTGCAGTATTAAAAATGGCGCAAGAGAATAATTGGAGAAATATTTTGATACTTGAA GACGATATGGTCTTCGAAGATGATGATGAAACAATTATCCGGACAAACAATTTTCTCTCTAAACTGAATAATATTCATTG GGATGCTGCATTTTTATCCGCCAGCTATTATATCGTTAACGCTATTGATGATAATTTTTTTAAAGTCAATTTCGCCTATC TGGCTAACAGCTATCTGGTCAATAATCATTATTATGAAAAATTAATCAATAACTACACGGAGTCTGTTCAGCGATTAACA AATGGCGAGTCATCGTCAGAGTACGGGTTGGATTCTAACTGGTTGAAAATAATGAAAATAGACAACTGGTACGGAATTTA CCCGGTTATTGGCTATCAGCGTACCGATATCAGTGATATTGAATATAAAGAGATCGATCGCACACACCAGTTCACCCGAA CATTCGATAAGATGAAAGCATACGGTTCAAAATAA
Upstream 100 bases:
>100_bases AAGAGTGGAGGGATTTAGCCTTTTTTATCGTCACTTTTAGTTTTTAACGTTATAAAGTGAGTTTTATACGGAACTATGAG ATGAAAATGGAGTTTTACCA
Downstream 100 bases:
>100_bases TGATATTTGAATTTATCGTCCACTCAGCAATATAGCCTGTATTTCCTACTCTGAATGAATAAAGGCCCCACAATATGTGG AGCCTTTCATGTTGTAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: Glysosyltransferase
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNENWNWSLVDKVVYINLKERTDRNEHIKKELEKVCFPPEKIIRFEAIRAGSGFIGCAKSHLAVLKMAQENNWRNILILE DDMVFEDDDETIIRTNNFLSKLNNIHWDAAFLSASYYIVNAIDDNFFKVNFAYLANSYLVNNHYYEKLINNYTESVQRLT NGESSSEYGLDSNWLKIMKIDNWYGIYPVIGYQRTDISDIEYKEIDRTHQFTRTFDKMKAYGSK
Sequences:
>Translated_224_residues MNENWNWSLVDKVVYINLKERTDRNEHIKKELEKVCFPPEKIIRFEAIRAGSGFIGCAKSHLAVLKMAQENNWRNILILE DDMVFEDDDETIIRTNNFLSKLNNIHWDAAFLSASYYIVNAIDDNFFKVNFAYLANSYLVNNHYYEKLINNYTESVQRLT NGESSSEYGLDSNWLKIMKIDNWYGIYPVIGYQRTDISDIEYKEIDRTHQFTRTFDKMKAYGSK >Mature_224_residues MNENWNWSLVDKVVYINLKERTDRNEHIKKELEKVCFPPEKIIRFEAIRAGSGFIGCAKSHLAVLKMAQENNWRNILILE DDMVFEDDDETIIRTNNFLSKLNNIHWDAAFLSASYYIVNAIDDNFFKVNFAYLANSYLVNNHYYEKLINNYTESVQRLT NGESSSEYGLDSNWLKIMKIDNWYGIYPVIGYQRTDISDIEYKEIDRTHQFTRTFDKMKAYGSK
Specific function: Unknown
COG id: COG3306
COG function: function code M; Glycosyltransferase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26508; Mature: 26508
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENWNWSLVDKVVYINLKERTDRNEHIKKELEKVCFPPEKIIRFEAIRAGSGFIGCAKS CCCCCCEEEEEEEEEEEEHHHCCCHHHHHHHHHHHCCCHHHHHEEHEEECCCCCCHHHHH HLAVLKMAQENNWRNILILEDDMVFEDDDETIIRTNNFLSKLNNIHWDAAFLSASYYIVN HHHHHHHHCCCCCCEEEEEECCEEEECCCCEEEECHHHHHHHCCCCCHHHHHEEEEEEEE AIDDNFFKVNFAYLANSYLVNNHYYEKLINNYTESVQRLTNGESSSEYGLDSNWLKIMKI EECCCEEEEEHHHHHCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE DNWYGIYPVIGYQRTDISDIEYKEIDRTHQFTRTFDKMKAYGSK CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNENWNWSLVDKVVYINLKERTDRNEHIKKELEKVCFPPEKIIRFEAIRAGSGFIGCAKS CCCCCCEEEEEEEEEEEEHHHCCCHHHHHHHHHHHCCCHHHHHEEHEEECCCCCCHHHHH HLAVLKMAQENNWRNILILEDDMVFEDDDETIIRTNNFLSKLNNIHWDAAFLSASYYIVN HHHHHHHHCCCCCCEEEEEECCEEEECCCCEEEECHHHHHHHCCCCCHHHHHEEEEEEEE AIDDNFFKVNFAYLANSYLVNNHYYEKLINNYTESVQRLTNGESSSEYGLDSNWLKIMKI EECCCEEEEEHHHHHCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE DNWYGIYPVIGYQRTDISDIEYKEIDRTHQFTRTFDKMKAYGSK CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA