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The map label for this gene is ycaO [H]

Identifier: 22126666

GI number: 22126666

Start: 3084016

End: 3085791

Strand: Direct

Name: ycaO [H]

Synonym: y2788

Alternate gene names: 22126666

Gene position: 3084016-3085791 (Clockwise)

Preceding gene: 22126653

Following gene: 22126667

Centisome position: 67.03

GC content: 49.49

Gene sequence:

>1776_bases
GTGAAGACAATGACGCAAACTTTTATTCCCGGCAAAGACGCTGCGCTGGAAGACTCTATCTCCCGTTTTCAGCAAAAACT
GAGCGACCTCGGTTTTAATATTGAAGAAGCCTCTTGGCTTAACCCTGTTCCTCACGTTTGGTCGGTACATATCCGCGACC
GCGACTGCCCGTTGTGCTTTACCAACGGCAAAGGCGCCAGTAAAAAAGCGGCTCTGGCATCAGCTCTGGGCGAATATTTT
GAGCGTTTATCCACCAACTATTTCTTTGCTGACTTCTATCTGGGCAAAGCCATCGCTGAGGGTGATTTCGTTCATTACCC
AAACGAGAAGTGGTTTCCGATCCCGGCGGATAATCTGCTACCGGAAGGCATTCTGGATGAGCGTCTGCTGGCGTTTTACG
ACCCAGAGCAAGAGTTGGTCGCCAGTGATTTGGTTGATTTGCAGTCGGGTAATGCCAAGCGTGGTATCTGTTCACTGCCC
TTTACTCGTCAATCAGATTTAGAAACTGTCTATATCCCGATGAATATTATCGGCAATCTGTATGTTTCAAACGGTATGTC
AGCAGGGAATACCGCTAACGAAGCCCGCGTACAGGCACTGTCTGAAGTTTTTGAGCGTTATGTGAAAAACCGCATTATTG
CGGAGTCCATCAGCTTGCCAGAGATCCCCGCCGAGGTATTGAATCGCTATCCAGGCGTGGTAGAAGCTATCACTAAGCTG
GAAGAAGAAGGTTTCCCTATCCTGTCTTACGACGCCTCTCTGGGGGGCGCTTATCCGGTTATCTGTGTCGTGCTATTTAA
CCCGTCAAACGGTACCTGTTTCGCGTCATTCGGCGCACATCCCGATTTTGGTGTGGCATTAGAACGCACGGTGACGGAGT
TATTACAGGGCCGCAGTCTGAAAGATCTTGATGTCTTTACTGCACCAACCTTTGATGACGAAGAAGTGGCAGAACATACC
AACCTGGAAACCCACTTTATCGATTCAAGCGGTCTAATTAGTTGGGATATGTTTAAGCAGGATGCAGATTACCCATTTGT
TGACTGGAGCTTCAAGGGCACCACAGAAGAAGAGTTCGCGACATTGATGGCTATCTTCCAACAAGAAGGTGCCGAAGTGT
ACATCGCAGATTATGAGCACTTAGGTGTCTACGCCTGCCGGATCTTGGTGCCGGGGATGTCTGATATCTACCCTGCCGAA
GACTTGCTGATGGCGAACAACACCATGGGTGTACATCTGCGTGATACTTTACTGGCCTTGCCAGATACAGACTGGCAGCC
AGCACAGTACTTGGAATTGATTCAGCAGATTGATGATGAAGGCTTGGATGATTTTGCCCGTGTGCGTGAACTGCTGGGTA
TCGCCTCCGGTAAAGATAATGGCTGGTACACCCTGCGGGTTGGCGAACTGAAATCAATGCTGGCACTGGCGGGCGGTGAT
CTCGAGCAAGCGCTGATCTGGGTTGAATGGACACAAGACTTTAACGCTTCCGTCTTTACAGCAAAACAGGCCAACTATTA
CCGTTGCCTGCAAACGCTACTGCTCTTGAACCAAGAGCCTGATCGTGACCCGATGCAATATTACAATGCATTCGTCAAGA
TGTATGGTCAGGAAGCGGTCGATATTGCCTCAGCGGCCTTATCGGGTGAAATTCGCTTCAACGGCCTGTTCAGTGTTGAC
GAAGATCTGAAAGCATTACCCGCTCATCAGGCTTTACTCGGCGCTTATGCTAAGTTGCAGGCGGCTAAACGTCGCCATTG
GGCTAAAAGCGAGTAA

Upstream 100 bases:

>100_bases
AATATCCATATGAAAACTGTGATATCTACTGTGCTTTCAGAATACATGGAGCTATTAACCAAAACCCCGTATGATTGCCC
GCTTTTAGTACCGCCAAAAA

Downstream 100 bases:

>100_bases
TACGGCTCTTCCTTAACCGCTCCGCCAAGTTATTGAGTTTGTAGCCTGGCGACAAACGTGCGTATCCCGAATCACTGCCC
CGCGTCAGTGATTCGGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MKTMTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNGKGASKKAALASALGEYF
ERLSTNYFFADFYLGKAIAEGDFVHYPNEKWFPIPADNLLPEGILDERLLAFYDPEQELVASDLVDLQSGNAKRGICSLP
FTRQSDLETVYIPMNIIGNLYVSNGMSAGNTANEARVQALSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAITKL
EEEGFPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTAPTFDDEEVAEHT
NLETHFIDSSGLISWDMFKQDADYPFVDWSFKGTTEEEFATLMAIFQQEGAEVYIADYEHLGVYACRILVPGMSDIYPAE
DLLMANNTMGVHLRDTLLALPDTDWQPAQYLELIQQIDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGD
LEQALIWVEWTQDFNASVFTAKQANYYRCLQTLLLLNQEPDRDPMQYYNAFVKMYGQEAVDIASAALSGEIRFNGLFSVD
EDLKALPAHQALLGAYAKLQAAKRRHWAKSE

Sequences:

>Translated_591_residues
MKTMTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNGKGASKKAALASALGEYF
ERLSTNYFFADFYLGKAIAEGDFVHYPNEKWFPIPADNLLPEGILDERLLAFYDPEQELVASDLVDLQSGNAKRGICSLP
FTRQSDLETVYIPMNIIGNLYVSNGMSAGNTANEARVQALSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAITKL
EEEGFPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTAPTFDDEEVAEHT
NLETHFIDSSGLISWDMFKQDADYPFVDWSFKGTTEEEFATLMAIFQQEGAEVYIADYEHLGVYACRILVPGMSDIYPAE
DLLMANNTMGVHLRDTLLALPDTDWQPAQYLELIQQIDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGD
LEQALIWVEWTQDFNASVFTAKQANYYRCLQTLLLLNQEPDRDPMQYYNAFVKMYGQEAVDIASAALSGEIRFNGLFSVD
EDLKALPAHQALLGAYAKLQAAKRRHWAKSE
>Mature_591_residues
MKTMTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNGKGASKKAALASALGEYF
ERLSTNYFFADFYLGKAIAEGDFVHYPNEKWFPIPADNLLPEGILDERLLAFYDPEQELVASDLVDLQSGNAKRGICSLP
FTRQSDLETVYIPMNIIGNLYVSNGMSAGNTANEARVQALSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAITKL
EEEGFPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTAPTFDDEEVAEHT
NLETHFIDSSGLISWDMFKQDADYPFVDWSFKGTTEEEFATLMAIFQQEGAEVYIADYEHLGVYACRILVPGMSDIYPAE
DLLMANNTMGVHLRDTLLALPDTDWQPAQYLELIQQIDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGD
LEQALIWVEWTQDFNASVFTAKQANYYRCLQTLLLLNQEPDRDPMQYYNAFVKMYGQEAVDIASAALSGEIRFNGLFSVD
EDLKALPAHQALLGAYAKLQAAKRRHWAKSE

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=586, Percent_Identity=80.2047781569966, Blast_Score=978, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 66066; Mature: 66066

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTMTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEE
TNGKGASKKAALASALGEYFERLSTNYFFADFYLGKAIAEGDFVHYPNEKWFPIPADNLL
ECCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCEEECCCCCCCCCCCHHCC
PEGILDERLLAFYDPEQELVASDLVDLQSGNAKRGICSLPFTRQSDLETVYIPMNIIGNL
CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEHHHHHHH
YVSNGMSAGNTANEARVQALSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAITKL
HEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
EEEGFPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSL
HHCCCCEEEECCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCC
KDLDVFTAPTFDDEEVAEHTNLETHFIDSSGLISWDMFKQDADYPFVDWSFKGTTEEEFA
CCCEEEECCCCCHHHHHHHCCCCEEEECCCCCEEHHHHHCCCCCCEEEEEECCCCHHHHH
TLMAIFQQEGAEVYIADYEHLGVYACRILVPGMSDIYPAEDLLMANNTMGVHLRDTLLAL
HHHHHHHHCCCEEEEEECHHHHHEEEEEECCCCCCCCCCHHHEEECCCCEEEEEHHEEEC
PDTDWQPAQYLELIQQIDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGD
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCC
LEQALIWVEWTQDFNASVFTAKQANYYRCLQTLLLLNQEPDRDPMQYYNAFVKMYGQEAV
HHHEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHH
DIASAALSGEIRFNGLFSVDEDLKALPAHQALLGAYAKLQAAKRRHWAKSE
HHHHHHHCCCEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTMTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEE
TNGKGASKKAALASALGEYFERLSTNYFFADFYLGKAIAEGDFVHYPNEKWFPIPADNLL
ECCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCEEECCCCCCCCCCCHHCC
PEGILDERLLAFYDPEQELVASDLVDLQSGNAKRGICSLPFTRQSDLETVYIPMNIIGNL
CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEHHHHHHH
YVSNGMSAGNTANEARVQALSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAITKL
HEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
EEEGFPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSL
HHCCCCEEEECCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCC
KDLDVFTAPTFDDEEVAEHTNLETHFIDSSGLISWDMFKQDADYPFVDWSFKGTTEEEFA
CCCEEEECCCCCHHHHHHHCCCCEEEECCCCCEEHHHHHCCCCCCEEEEEECCCCHHHHH
TLMAIFQQEGAEVYIADYEHLGVYACRILVPGMSDIYPAEDLLMANNTMGVHLRDTLLAL
HHHHHHHHCCCEEEEEECHHHHHEEEEEECCCCCCCCCCHHHEEECCCCEEEEEHHEEEC
PDTDWQPAQYLELIQQIDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGD
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCC
LEQALIWVEWTQDFNASVFTAKQANYYRCLQTLLLLNQEPDRDPMQYYNAFVKMYGQEAV
HHHEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHH
DIASAALSGEIRFNGLFSVDEDLKALPAHQALLGAYAKLQAAKRRHWAKSE
HHHHHHHCCCEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]