| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126597
Identifier: 22126597
GI number: 22126597
Start: 3002129
End: 3004558
Strand: Direct
Name: 22126597
Synonym: y2718
Alternate gene names: NA
Gene position: 3002129-3004558 (Clockwise)
Preceding gene: 22126596
Following gene: 22126598
Centisome position: 65.25
GC content: 49.84
Gene sequence:
>2430_bases ATGGAGGCTTTAATGACGACCACCCTTGATATTATCAATAGCGCTAAAGACCTAGATCCTGCTGAGTATCGCGCGTTTTT TCTTCAAAGCAAAGCACCCCTGTTTTACGATCTGCGATTTCTTATCGCGGCTGAGCAGTCACCCTTGTTAAACGTCAGTA AAATTTTCTATTTGCTTGCGCGAGACGAAGGGAGGCTGATTGCGCTGGTTCCGCTTTATCTTCAAGAATTTCGGTCCGCT GACCCGTTAGGGTTATTGATTTCCTCCGCTAAGCTCTCGATAGAATCTGAAGAGCGCGGACTGTTTAGCCATATTATACA TTGTACGGATACCACGATACCGACGTTAAGTCACGACCCAAGTCTTTACGCACGAATATTCGATGCTATTACGGCTATCG CACAGGCTGAGCTGGCGCGTTATTTCTGTTTTCTCAATGTACAGGATGGGGTGCTCTTGCGTGAGGCTCAACGTAATGGG CTAAATATAAACTACATGGTGGATAAATTTTCAATCGAACTGGATGCTTTTCCGGATTTTGACAGTTTTGCGCAGGCTTT GCCCAAGTACAGGCGTTACGAAATGGTACGCCAGCTTCGTATCTTTAACCGCAGCGATGCGAAAGTTCGAATACTTGCTC CTCCCTTTGATAATGAAATTGAGAAACTGGCCCGGTTGTATTATTTGACCACCCAACGGCTGGGGACGCCCTATTATTGG CCAGAATCACAATTGGCTGTTTTTTGCCGTCTTTGCGGCGATCTGGTTCGTCTTATCGTCGTAGAACAGAACGGGCAGAT TGTCAGCGGCTTTATCTGCTTCGAGGAAGACGGCGCTCTCCATTTCTGGTCGGCCGGCATGGATGATGAGAGTTCCGATT TCAGCCCTTACACCTTGGGCGTGTCTGCCGTGTATCGCTATGCATTCGAAAAAGGAATTAATCTTATCGAGTGCGGCCGC TTGAATTCCCACATCAAGACTCGCTTGGGGTTCAAACCCAAACGACTCTATTCCATTGTCAGCCAGGATCTGGGGATCCC CGCCGCTACGCAGACTTCTCTGTCTCAACTGAAGCTGGCATCGCAACTGGATGGCGAGGTTCGTCTTGCTTCGCATCCCG CCTTTGATGAGTGGTATCTCACCAGTGTCTGGAACGGTCGAGGCCCAACACGTAGACCTGCTGGAATAGTACGCGCCGCG ACTGAGGCAGATGTGATCCGCACGATTGTCTTTGCCAAGGAGCGAGGCATGGAAGTGAGCGTTCGTGGAAGTGGGCACAA CTACGTCGGTTGTTTTCTTCGCGTTGATACGCTGATGTTGGACATTTCCGGCTTGAAGGGACTTGATATTGATAGCCGGC ACAAGCGTGCCATCGTTGAATCTGGGGTCAGTAGTGGTCAATTGTGTCATGCACTGGCGGCTAAAGGTTTGGCTTTTCCG ACAGGACATGTAAAAGAAGTGGGTATCAGCGGATTCCTGTTGGGGGGAGGGCTCGGGATCAACTGTAGTCAATGGGGAGG GATGAGTGTGTTCAACGTACAAGCCTTGGACATTGTCACCGCAGACGGTCATCTACGCCATGTTTCCGAAACCCAGGAGC CAGACTTGTTCTGGGCCGCTCGTGGCGCTGGACCCTGTTCGTTTTTTGTTGTGACCCGTTTTTACCTCAGTTGCTACTCA CTGCCTCGGGTAATAACCAACAGCTTATATACGCTACCTTTCACGTATTTACACGATTTATTGGCGAGACTTGAAGACGC ATCTCCCCCTACAAATCTTCAGGTGATGGTGTCTGTCAGCCCCCCGACATCGGGTGACACACCAGCAGTACTGTTAAATA TTTTGGCGTTTACCGATAGCCCGCAAGAGGCGCAAGCGCTATGTGAATCTTTTGAAACCCGCCTAGAGCTGCCACTTACA GCCTTGGCCATCAATCAGCCCTCAAACTTCGAGACCATTTATGAGCAGTTCAGCAGCATGGTGGTATCAAAAAGGTTTTA TGCCGACAATATCCTTACAGATAACACACAGGAATTGGTTTCCATCCTATCCCGATATTTATCAGACGCGCCGTCTCGGG GTGCCCTTACAACGATTTTCTGGCGGGGTGTGACCACCTATCCGCAAGCAGCATTTTCGGCACACGGCAAGTTTTTTGTA TCGACCTACGCCCAGTGGGACGATGCAAAAGATGACAGTGTCAATAAATATTGGTTAAAACGGATGTATGACGAGCTTCA GGAAATTGCCCGTAGTCGTTATATCAACGAGTATGATCTTGAGACAAGGGCGGGCGAGACCAGCAAGTGCTTCGCCGCTG AGAACTGGGAGAGGCTGCAAAGGCTCCGGCTTGAATACGACCCTGACGGCGTATTTGTTGACGTGCAGCAGTTGGAGGAG CATGGCGATCAGCCAGGAGCGAACAACTAA
Upstream 100 bases:
>100_bases TGGGGGCTTCTGTCGCATTAAGATGCAGAAAGGTAACATGCTGTTTTTCTTAATGTTACCTATTGCCACTCAGTCAAATT GTCTGCCAATCCGATAAACT
Downstream 100 bases:
>100_bases ATGGAATCTCAGCGCCTTATCTCCCCGCCCTGAAGGACGGGGTTTTACGGCGAACTTGATAATTGCTTGTTAGATATTTT TTCATTTCCCCCTGCCAGGT
Product: oxidoreductase
Products: NA
Alternate protein names: 6-HDNO [H]
Number of amino acids: Translated: 809; Mature: 809
Protein sequence:
>809_residues MEALMTTTLDIINSAKDLDPAEYRAFFLQSKAPLFYDLRFLIAAEQSPLLNVSKIFYLLARDEGRLIALVPLYLQEFRSA DPLGLLISSAKLSIESEERGLFSHIIHCTDTTIPTLSHDPSLYARIFDAITAIAQAELARYFCFLNVQDGVLLREAQRNG LNINYMVDKFSIELDAFPDFDSFAQALPKYRRYEMVRQLRIFNRSDAKVRILAPPFDNEIEKLARLYYLTTQRLGTPYYW PESQLAVFCRLCGDLVRLIVVEQNGQIVSGFICFEEDGALHFWSAGMDDESSDFSPYTLGVSAVYRYAFEKGINLIECGR LNSHIKTRLGFKPKRLYSIVSQDLGIPAATQTSLSQLKLASQLDGEVRLASHPAFDEWYLTSVWNGRGPTRRPAGIVRAA TEADVIRTIVFAKERGMEVSVRGSGHNYVGCFLRVDTLMLDISGLKGLDIDSRHKRAIVESGVSSGQLCHALAAKGLAFP TGHVKEVGISGFLLGGGLGINCSQWGGMSVFNVQALDIVTADGHLRHVSETQEPDLFWAARGAGPCSFFVVTRFYLSCYS LPRVITNSLYTLPFTYLHDLLARLEDASPPTNLQVMVSVSPPTSGDTPAVLLNILAFTDSPQEAQALCESFETRLELPLT ALAINQPSNFETIYEQFSSMVVSKRFYADNILTDNTQELVSILSRYLSDAPSRGALTTIFWRGVTTYPQAAFSAHGKFFV STYAQWDDAKDDSVNKYWLKRMYDELQEIARSRYINEYDLETRAGETSKCFAAENWERLQRLRLEYDPDGVFVDVQQLEE HGDQPGANN
Sequences:
>Translated_809_residues MEALMTTTLDIINSAKDLDPAEYRAFFLQSKAPLFYDLRFLIAAEQSPLLNVSKIFYLLARDEGRLIALVPLYLQEFRSA DPLGLLISSAKLSIESEERGLFSHIIHCTDTTIPTLSHDPSLYARIFDAITAIAQAELARYFCFLNVQDGVLLREAQRNG LNINYMVDKFSIELDAFPDFDSFAQALPKYRRYEMVRQLRIFNRSDAKVRILAPPFDNEIEKLARLYYLTTQRLGTPYYW PESQLAVFCRLCGDLVRLIVVEQNGQIVSGFICFEEDGALHFWSAGMDDESSDFSPYTLGVSAVYRYAFEKGINLIECGR LNSHIKTRLGFKPKRLYSIVSQDLGIPAATQTSLSQLKLASQLDGEVRLASHPAFDEWYLTSVWNGRGPTRRPAGIVRAA TEADVIRTIVFAKERGMEVSVRGSGHNYVGCFLRVDTLMLDISGLKGLDIDSRHKRAIVESGVSSGQLCHALAAKGLAFP TGHVKEVGISGFLLGGGLGINCSQWGGMSVFNVQALDIVTADGHLRHVSETQEPDLFWAARGAGPCSFFVVTRFYLSCYS LPRVITNSLYTLPFTYLHDLLARLEDASPPTNLQVMVSVSPPTSGDTPAVLLNILAFTDSPQEAQALCESFETRLELPLT ALAINQPSNFETIYEQFSSMVVSKRFYADNILTDNTQELVSILSRYLSDAPSRGALTTIFWRGVTTYPQAAFSAHGKFFV STYAQWDDAKDDSVNKYWLKRMYDELQEIARSRYINEYDLETRAGETSKCFAAENWERLQRLRLEYDPDGVFVDVQQLEE HGDQPGANN >Mature_809_residues MEALMTTTLDIINSAKDLDPAEYRAFFLQSKAPLFYDLRFLIAAEQSPLLNVSKIFYLLARDEGRLIALVPLYLQEFRSA DPLGLLISSAKLSIESEERGLFSHIIHCTDTTIPTLSHDPSLYARIFDAITAIAQAELARYFCFLNVQDGVLLREAQRNG LNINYMVDKFSIELDAFPDFDSFAQALPKYRRYEMVRQLRIFNRSDAKVRILAPPFDNEIEKLARLYYLTTQRLGTPYYW PESQLAVFCRLCGDLVRLIVVEQNGQIVSGFICFEEDGALHFWSAGMDDESSDFSPYTLGVSAVYRYAFEKGINLIECGR LNSHIKTRLGFKPKRLYSIVSQDLGIPAATQTSLSQLKLASQLDGEVRLASHPAFDEWYLTSVWNGRGPTRRPAGIVRAA TEADVIRTIVFAKERGMEVSVRGSGHNYVGCFLRVDTLMLDISGLKGLDIDSRHKRAIVESGVSSGQLCHALAAKGLAFP TGHVKEVGISGFLLGGGLGINCSQWGGMSVFNVQALDIVTADGHLRHVSETQEPDLFWAARGAGPCSFFVVTRFYLSCYS LPRVITNSLYTLPFTYLHDLLARLEDASPPTNLQVMVSVSPPTSGDTPAVLLNILAFTDSPQEAQALCESFETRLELPLT ALAINQPSNFETIYEQFSSMVVSKRFYADNILTDNTQELVSILSRYLSDAPSRGALTTIFWRGVTTYPQAAFSAHGKFFV STYAQWDDAKDDSVNKYWLKRMYDELQEIARSRYINEYDLETRAGETSKCFAAENWERLQRLRLEYDPDGVFVDVQQLEE HGDQPGANN
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012951 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016168 - InterPro: IPR006094 - InterPro: IPR006093 [H]
Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]
EC number: =1.5.3.6 [H]
Molecular weight: Translated: 90749; Mature: 90749
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS01159 WW_DOMAIN_1 ; PS00862 OX2_COVAL_FAD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALMTTTLDIINSAKDLDPAEYRAFFLQSKAPLFYDLRFLIAAEQSPLLNVSKIFYLLA CCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHEEEEEEEEECCCCCCCHHHEEEEEE RDEGRLIALVPLYLQEFRSADPLGLLISSAKLSIESEERGLFSHIIHCTDTTIPTLSHDP CCCCCEEEEHHHHHHHHCCCCCCEEEEECCEEEECCHHCHHHHHHHHHCCCCCCCCCCCH SLYARIFDAITAIAQAELARYFCFLNVQDGVLLREAQRNGLNINYMVDKFSIELDAFPDF HHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCCEEEEEEEEEEEEEECCCCH DSFAQALPKYRRYEMVRQLRIFNRSDAKVRILAPPFDNEIEKLARLYYLTTQRLGTPYYW HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC PESQLAVFCRLCGDLVRLIVVEQNGQIVSGFICFEEDGALHFWSAGMDDESSDFSPYTLG CCHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEHH VSAVYRYAFEKGINLIECGRLNSHIKTRLGFKPKRLYSIVSQDLGIPAATQTSLSQLKLA HHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH SQLDGEVRLASHPAFDEWYLTSVWNGRGPTRRPAGIVRAATEADVIRTIVFAKERGMEVS HHCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCHHHEEHHHHHHHHHHHHHHHCCCEEE VRGSGHNYVGCFLRVDTLMLDISGLKGLDIDSRHKRAIVESGVSSGQLCHALAAKGLAFP EECCCCCEEEEEEEEEEHEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCC TGHVKEVGISGFLLGGGLGINCSQWGGMSVFNVQALDIVTADGHLRHVSETQEPDLFWAA CCCHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEECCCCCCCCEEEEE RGAGPCSFFVVTRFYLSCYSLPRVITNSLYTLPFTYLHDLLARLEDASPPTNLQVMVSVS CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEC PPTSGDTPAVLLNILAFTDSPQEAQALCESFETRLELPLTALAINQPSNFETIYEQFSSM CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH VVSKRFYADNILTDNTQELVSILSRYLSDAPSRGALTTIFWRGVTTYPQAAFSAHGKFFV HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHCCCCEEE STYAQWDDAKDDSVNKYWLKRMYDELQEIARSRYINEYDLETRAGETSKCFAAENWERLQ EEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH RLRLEYDPDGVFVDVQQLEEHGDQPGANN HHCCEECCCCEEEEHHHHHHCCCCCCCCC >Mature Secondary Structure MEALMTTTLDIINSAKDLDPAEYRAFFLQSKAPLFYDLRFLIAAEQSPLLNVSKIFYLLA CCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHEEEEEEEEECCCCCCCHHHEEEEEE RDEGRLIALVPLYLQEFRSADPLGLLISSAKLSIESEERGLFSHIIHCTDTTIPTLSHDP CCCCCEEEEHHHHHHHHCCCCCCEEEEECCEEEECCHHCHHHHHHHHHCCCCCCCCCCCH SLYARIFDAITAIAQAELARYFCFLNVQDGVLLREAQRNGLNINYMVDKFSIELDAFPDF HHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCCEEEEEEEEEEEEEECCCCH DSFAQALPKYRRYEMVRQLRIFNRSDAKVRILAPPFDNEIEKLARLYYLTTQRLGTPYYW HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC PESQLAVFCRLCGDLVRLIVVEQNGQIVSGFICFEEDGALHFWSAGMDDESSDFSPYTLG CCHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEHH VSAVYRYAFEKGINLIECGRLNSHIKTRLGFKPKRLYSIVSQDLGIPAATQTSLSQLKLA HHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH SQLDGEVRLASHPAFDEWYLTSVWNGRGPTRRPAGIVRAATEADVIRTIVFAKERGMEVS HHCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCHHHEEHHHHHHHHHHHHHHHCCCEEE VRGSGHNYVGCFLRVDTLMLDISGLKGLDIDSRHKRAIVESGVSSGQLCHALAAKGLAFP EECCCCCEEEEEEEEEEHEEEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCC TGHVKEVGISGFLLGGGLGINCSQWGGMSVFNVQALDIVTADGHLRHVSETQEPDLFWAA CCCHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEECCCCCCCCEEEEE RGAGPCSFFVVTRFYLSCYSLPRVITNSLYTLPFTYLHDLLARLEDASPPTNLQVMVSVS CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEC PPTSGDTPAVLLNILAFTDSPQEAQALCESFETRLELPLTALAINQPSNFETIYEQFSSM CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH VVSKRFYADNILTDNTQELVSILSRYLSDAPSRGALTTIFWRGVTTYPQAAFSAHGKFFV HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHCCCCEEE STYAQWDDAKDDSVNKYWLKRMYDELQEIARSRYINEYDLETRAGETSKCFAAENWERLQ EEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH RLRLEYDPDGVFVDVQQLEEHGDQPGANN HHCCEECCCCEEEEHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3622516; 2680607; 2115879 [H]