| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126584
Identifier: 22126584
GI number: 22126584
Start: 2989145
End: 2990689
Strand: Reverse
Name: 22126584
Synonym: y2705
Alternate gene names: NA
Gene position: 2990689-2989145 (Counterclockwise)
Preceding gene: 22126585
Following gene: 22126583
Centisome position: 65.0
GC content: 55.28
Gene sequence:
>1545_bases ATGCTGATGTCTGTACAGGAAAACCGTGCGCAGGGTACTGCGACGACCGTATTAAAGAATAGCCCTGCGGCACAAGGGGT TTACGCCGCCTTGTTTGAAAAAATCAACCTGAGCCCGGTCTCCTCACTGGCCGGTATCGAGGCGTTCCAGAACAACGATG CGCTGGCGGAAGCCACCACCGATGAGCGCGTTACCGCCGCCGTCAGTGTCTTTTTAGACCTGCTGAAGCAGTCGGCGAAG AAAGTAGAAAAACTGGATAAAACCCTGCTGGACGGCCATATTGCCGCACTGGATGACCAAATCAGCCGCCAGTTGGACGC GGTAATGCACCACCCCGATTTCCAGCGGGTGGAATCGACCTGGCGTGGTGTGAAGTCGCTGATCGATCAGACCGATTTCC GCCAGAACGTGCGCATCGAGCTGCTGGATATCAGTAAAGATCATCTGGTGCAGGATTTTGAAGATGCCCCGGAAATCTCA CAAAGCGGTTTATACGCCCAGACCTATATTCAGGAATACGACACCCCCGGCGGCGAGCCGATTGCCGCGGCTATCTCCAA CTACGAGTTCGACCGTAGCCCGCAAGATATCGCGTTATTGCGCAATATCTCCAAGGTCGCGGCGGCAGCCCATATGCCGT TTATCGGTTCCGTTGGCCCCGAGTTCTTTGGTAAAGAGAACATGGAAGACGTGGCAGCCATCAAAGATATCGCCAACTAC TTTGACCGTGCTGAATACATCAAGTGGAAAGCCTTCCGCGACTCGGATGATTCCCGCTATATCGGCCTGACCATGCCGCG CGTGCTGGGGCGTTTGCCTTACGGCCCGGACACGGTGCCGGTACGCAGCTTCAACTACGTTGAGCAGGTGAAAGGGCCGG ATCATGATCGCTACTTGTGGACCAATGCCTCATTTGCCTTTGCTGCTAACATGGTGAAAAGCTTCATTAAAAATGGCTGG TGTGTGCAGATCCGGGGCCCGCAGGCCGGTGGTGCGGTCACCAACTTACCGATCCACCTGTACGATCTGGGTACCGGTAA TCAGGTCAAAATTCCGTCAGAGGTGATGATCCCGGAAACCCGCGAGTTCGAGTTTGCCAATCTGGGCTTTATCCCGCTGT CGTACTACAAAAACCGCGATTACTCGTGCTTCTTCTCGGCCAACTCGGCGCAGAAACCGGCGCTGTATGACACCGCGGAT GCCACGGCCAACAGCCGCATCAACGCCCGTTTGCCGTATATCTTCCTGCTGTCGCGCATTGCCCATTATCTGAAACTGAT CCAGCGCGAGAACATCGGCACCACCAAAGATCGCCGTCTGCTGGAGCTGAACAACTGGGTGCGCGGGCTGGTGACGGAAA TGACTGATCCGGGTGATGATTTGCAGGCGTCCCATCCCCTGCGTGATGCCAAAGTGACGGTCGAAGATATCGAAGACAAC CCCGGCTTCTTCCGCGTCAAGCTGTATGCGGTGCCGCATTTCCAGGTGGAAGGGATGGACGTCAATCTGTCATTGGTTTC CCAAATGCCAAAGGCTAAGGCATAA
Upstream 100 bases:
>100_bases TGCCTTGAGCGATGAACTGCGCGCTGAACTGGCGGCCCTGGCGCCAAAAGAGGGTTAATCCCGGGATTGGCTGCTTGTCA TTAGAAAGAAGAAAAGGAAC
Downstream 100 bases:
>100_bases ACGGCGACACGATGAAAATTGAACGCCCTCTGTGGGCTCGCGGGATCCTGGTGTCTCCGCAACAATTTCAACAACAGGCT TCCTGGGAGGCATGGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAK KVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIS QSGLYAQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEDVAAIKDIANY FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYLWTNASFAFAANMVKSFIKNGW CVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTAD ATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDN PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
Sequences:
>Translated_514_residues MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAK KVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIS QSGLYAQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEDVAAIKDIANY FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYLWTNASFAFAANMVKSFIKNGW CVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTAD ATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDN PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA >Mature_514_residues MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAK KVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIS QSGLYAQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEDVAAIKDIANY FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYLWTNASFAFAANMVKSFIKNGW CVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTAD ATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDN PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57533; Mature: 57533
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATT CCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCC DERVTAAVSVFLDLLKQSAKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVEST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH WRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEP HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCCH IAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEDVAAIKDIANY HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHH FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYLW HHHHHHEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEE TNASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPET ECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCC REFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSRI CCCCCCCCCCEEEHHHCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHH AHYLKLIQRENIGTTKDRRLLELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDN HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA CCEEEEEEEEECCEEEECCEECHHHHHCCCCCCC >Mature Secondary Structure MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATT CCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCC DERVTAAVSVFLDLLKQSAKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVEST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH WRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEP HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCCH IAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEDVAAIKDIANY HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHH FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYLW HHHHHHEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEE TNASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPET ECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCC REFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSRI CCCCCCCCCCEEEHHHCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHH AHYLKLIQRENIGTTKDRRLLELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIEDN HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC PGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA CCEEEEEEEEECCEEEECCEECHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA