| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126570
Identifier: 22126570
GI number: 22126570
Start: 2972545
End: 2972682
Strand: Direct
Name: 22126570
Synonym: y2691
Alternate gene names: NA
Gene position: 2972545-2972682 (Clockwise)
Preceding gene: 22126569
Following gene: 22126580
Centisome position: 64.61
GC content: 44.2
Gene sequence:
>138_bases TTGCTTTGGTTATCACTGCACGAAACCATCACTCGTAACCATCAATGTCGTTACATGTGGCAATTACTGATAAAAGTGAA GCAATTTATGGCGGTGGCTTCACCTTTCCCCGGAAGTCAGGCTGTAGCGGTATTATGA
Upstream 100 bases:
>100_bases CATACACAAAAGCCGTATAGTAGAATACTGATTACAGGAAAACCCGAAGTTTAATCTGTTATTTTTACCGACATATTTAC CATGGTTAAATAAAATAGAG
Downstream 100 bases:
>100_bases AAAACTATTTAGGCACTTGCATCAATACATTCTTAAATATGCCGTAAGTAATCAAGTCATTCTTTAGGGTAACGGTTAAA TTCCCACGTTTTATCTTTAG
Product: transposase
Products: NA
Alternate protein names: Integrase Protein
Number of amino acids: Translated: 45; Mature: 45
Protein sequence:
>45_residues MLWLSLHETITRNHQCRYMWQLLIKVKQFMAVASPFPGSQAVAVL
Sequences:
>Translated_45_residues MLWLSLHETITRNHQCRYMWQLLIKVKQFMAVASPFPGSQAVAVL >Mature_45_residues MLWLSLHETITRNHQCRYMWQLLIKVKQFMAVASPFPGSQAVAVL
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5244; Mature: 5244
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWLSLHETITRNHQCRYMWQLLIKVKQFMAVASPFPGSQAVAVL CEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC >Mature Secondary Structure MLWLSLHETITRNHQCRYMWQLLIKVKQFMAVASPFPGSQAVAVL CEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA