| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126561
Identifier: 22126561
GI number: 22126561
Start: 2959551
End: 2960132
Strand: Reverse
Name: 22126561
Synonym: y2682
Alternate gene names: NA
Gene position: 2960132-2959551 (Counterclockwise)
Preceding gene: 22126562
Following gene: 22126560
Centisome position: 64.34
GC content: 53.09
Gene sequence:
>582_bases GTGTTAACTACCGTTTGGAAAAATAAAACCTGTACTTCGAAACATAAAAGCTGGGCCGCCTGGAAAAATAAAATCTGCAT CCCCGCACTGGTCTTGTTGCTCAGTGGCTGCGGGCTGACGCAAGCCGTGACCGATAGCACCGTGTCGGCCACAAAATCAC TGTTTTATAAGCAGATAAAGGTGCTGCATCTGGACTTTACCGCCCGTGAAGCCCTGAATACCGATGCGCACGAGGCGAAC TCGTCATCGGAGCCGGTAATGGTGCGGGTTTATCAGTTACGTGATGATAAAACCTTCCTCAAAACGGTGTATCAACAACT GGCAAGCGACGGGGAGGCGGCGCTTAAAGATGACCTGCTGGCCAGCCGCAGTGTGGTGGTGAAACCGGGCGGGGCGGTAA CACTGGATATGCCGATGGAAAAAGAGACCCAGTTTGTGGCAGTGGTGGCGCTGTTCCGTCATCCGGATATGGCCAAAGAC CACTGGCGTCTGATACTCACGCTGGACGACCTGCATCCCGATAAGCCCCGTACCCTTGAGTTGGGTAATAACAGCCTGAC CCTGCGGACGGAGAAAAAATAA
Upstream 100 bases:
>100_bases GATGACGCGACGCTGTCAGACGATATACCTGAATATTTTACCGTGGCGCTGGGCCACTACCGTGGGCTGGCTCCACAGCA ACATCAAGAAGGAAACCGAC
Downstream 100 bases:
>100_bases TGCCGGATACCTCCTCGCCGTCACTGTATGAGCAATTGCTGGGCAATTTCACCGGCGGGCTTGACCTGCATCAGGTCAGT GACGAAAACCAGGTCATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MLTTVWKNKTCTSKHKSWAAWKNKICIPALVLLLSGCGLTQAVTDSTVSATKSLFYKQIKVLHLDFTAREALNTDAHEAN SSSEPVMVRVYQLRDDKTFLKTVYQQLASDGEAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKD HWRLILTLDDLHPDKPRTLELGNNSLTLRTEKK
Sequences:
>Translated_193_residues MLTTVWKNKTCTSKHKSWAAWKNKICIPALVLLLSGCGLTQAVTDSTVSATKSLFYKQIKVLHLDFTAREALNTDAHEAN SSSEPVMVRVYQLRDDKTFLKTVYQQLASDGEAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKD HWRLILTLDDLHPDKPRTLELGNNSLTLRTEKK >Mature_193_residues MLTTVWKNKTCTSKHKSWAAWKNKICIPALVLLLSGCGLTQAVTDSTVSATKSLFYKQIKVLHLDFTAREALNTDAHEAN SSSEPVMVRVYQLRDDKTFLKTVYQQLASDGEAALKDDLLASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKD HWRLILTLDDLHPDKPRTLELGNNSLTLRTEKK
Specific function: Unknown
COG id: COG3521
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21594; Mature: 21594
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTVWKNKTCTSKHKSWAAWKNKICIPALVLLLSGCGLTQAVTDSTVSATKSLFYKQIK CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHE VLHLDFTAREALNTDAHEANSSSEPVMVRVYQLRDDKTFLKTVYQQLASDGEAALKDDLL EEEECHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH ASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKDHWRLILTLDDLHPDKPRTLE HCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEE LGNNSLTLRTEKK ECCCEEEEEECCC >Mature Secondary Structure MLTTVWKNKTCTSKHKSWAAWKNKICIPALVLLLSGCGLTQAVTDSTVSATKSLFYKQIK CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHE VLHLDFTAREALNTDAHEANSSSEPVMVRVYQLRDDKTFLKTVYQQLASDGEAALKDDLL EEEECHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH ASRSVVVKPGGAVTLDMPMEKETQFVAVVALFRHPDMAKDHWRLILTLDDLHPDKPRTLE HCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEE LGNNSLTLRTEKK ECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA