| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126548
Identifier: 22126548
GI number: 22126548
Start: 2944012
End: 2946489
Strand: Direct
Name: 22126548
Synonym: y2669
Alternate gene names: NA
Gene position: 2944012-2946489 (Clockwise)
Preceding gene: 22126547
Following gene: 22126549
Centisome position: 63.99
GC content: 36.16
Gene sequence:
>2478_bases ATGGAGTTGGTCGAGGAGCTTTGCAGAAGACTAAGTCCATCAAGCATTTTAGACGTTATAAATAAAACAAAAATAATAAT ATCACTAAATATAATAATCCCAGTGAGATATTCTTGTATGCTTACGAGTGAATTTTTAAACGATGTAAAGCTCAGCCCCA TGGCAACACTATTAGCCATTATTATAACCGCTATAGGGATGATCTCACTGTTTCTCGTATTACTGCTTTATTTAACTGAT CATAGTATTGAAAAATTCCATCATGATTATCCACAAATTTATCGAATAGAAACACAATTTAATCTGCCCAATGGTGAAAA AGTCAAATCGGCACAAGTCCCTTTGCCATTAATTACTGCATTACAAAATGAAAAAAACATCAAAGATGTCGCCTACGCTT TACGCTTGTTTATCGACTTACAGGTTAACGGTAAAACACAGGCTGACGTAGAAATTTATGCTGTTAGCCCTAATTTTTTA ACGGCACTCAATCCCTATCGACAGAAAATACCTCATCTGTCACACAATGAAATTATCATTACGCCTGAGTTTAATCGCCA ATATCTTCATTTAAATCACCCTAAAGGCCAGGTCATCACGTTAGGAAAAAAAGGGAAATTCTTTATCAAAGATGTGGTTA ACTTAAATACGTCCAGCCGCTTTAACACCCGCGCTGTCATTGCATTTTCTCCGGATATCATCGATGACTACCATGATAAA AGGCATGACTGGTACGATATGCACAGCTATCTCTTTGTCACCATGGTCGGCGGGGGAAAACCCACTCATGAGCAGTTAAA AACGCTGGTCACCCGGTATGCACCTCAACTCCCTGGCGCTCCGTTTAGCCCTGAAGAGTTTATTCAATTATCCGCCCGTA ATATTACCGATATACATTATGATGCTGAACTCCCCGATGAAATGAGCACAGTTATTTCAAAATCATATCTTTATACCTTG TATATGGCGGGTTTCTTTATCTTTTTAACCACCACCATGAACTTTTTCAATGTTAATAACATCGTAAATAAAAACAAAAA AAGCAGTTTTCAGATAAAGAAATCGGTTGGTGCCTCTAATTATCAATTACTGACAGAGTCATTTTTCATCGCAACACTGC AAGCGGTGTGTGTCCTCACACTGGCGTTTATCTTCCTCTCAATTTTGATGCAAGCATCTGAAAATGTCAGGGAATTGATT TTAACGCAAGAAACAGGCCGGCTAATATCATCATTTTCTGTAGCGTTCTTCTCACTCTATATTGCGATATTAATTTCGCA TTACCTCTATCTATCAACCTCAGTTTTCCCTAATAAGTCATGGCATAATCATGCTTATAGTGCACACCCAATATCACATT ACATTTACCAAGTAACGTTATCTATACAAATAGCCATAGCAGGGATCATTATTTATCTTTGGGCAGGCATAATGACACAA ATAGATTTTATGCAGAGTCATATGTTTGGTTATGAAAAAGAAAATGTCGTGACATTTCCACTAAGCGATGAATTAAAATC TTTAACATCATTAAATAGCTTACAAGATGAATTAAATAATAGCATAGGTATCTCCCCAATCGCATTGAGTAGTTGGCGAC CATTTGATATGTCAAGAACGACGACTTCGGTTTTTCATCAAAATCAGCAGGAGCAAGATAAACTCGTTTCCGTAAATATA CTGAACGTGAACAAAAACTTCACCGACACTTGGGGAATAAAAACATTAGCAGGCTACGAAAACCCTATTACACCCAGTAA AAATGATAATACTTATCATGCTATAGCGACAAAGACCTTTATGTCGGCGATGGGGAAATCATCAAGTGATGAGGTACTGA ATACTCTTTTTTATATTAACGACAATGATGCTGAATATACAGTTCGTATACTCAGGGTAGTTAATGACTTTTATCTTGCA GATCGAGATAAAAATACAACTCCATTGCTTATTCTCATCAGTGATGAGGTGCAACGATATGGGGCACTGAAATTACATCA TCAGAGTGATCTTAGTACCGTAAAAATGCTACTTGAACGATATGGGGTCAATATTGACCAAATAAAACTTGCTGAACATA TACACCAAGAATATTTTAATGATCATAATTTAATGAAAAAAACAATCAGCTTGGTTACCCTATTCTCAGTCATATTACTA CTCATAAGCACCATGATCATCGGAATGGCCGAATCAAAAAGGATCAGTAAGATATTAAAAATAATGGAGTCAGTAGGTGG CTCTCTATATACACATATCATTTTCTTTATAAAGGAAAATATAACCCCCGTACTGGTTGCTATAGTAATAGCGTTCCCAA TTGGTTTTATCCTATTACAAAAATGGCTGAGTAAATATAACTTCATTAATAATCTCTCATACCTCTATGCCTTTGGATCA CTTTTGCTGTTTATGGTGAGTCTCGTTAGTGTAATGACCTTGTCACTCATTTTATCGCATACCAAAAAGAATAAATAA
Upstream 100 bases:
>100_bases TGAAATCGTTAGAGGAATCATTCAAGAATAATCCACTATATATCACTAGCAATGAAATAGACGAAATTAAAAATAATACC CTACACAGTAAGATAACGGC
Downstream 100 bases:
>100_bases CATGGATATAAAATTAGAAAAAAAGATAAATATCAACAGTAGAGAGAAAATAGTTATACTTTTCGTGTTGCTTATTCTAT TTTTAAGCTGTTTCTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 825; Mature: 825
Protein sequence:
>825_residues MELVEELCRRLSPSSILDVINKTKIIISLNIIIPVRYSCMLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTD HSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLITALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFL TALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVITLGKKGKFFIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDK RHDWYDMHSYLFVTMVGGGKPTHEQLKTLVTRYAPQLPGAPFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTL YMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGASNYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELI LTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNKSWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQ IDFMQSHMFGYEKENVVTFPLSDELKSLTSLNSLQDELNNSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNI LNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIATKTFMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLA DRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLERYGVNIDQIKLAEHIHQEYFNDHNLMKKTISLVTLFSVILL LISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIKENITPVLVAIVIAFPIGFILLQKWLSKYNFINNLSYLYAFGS LLLFMVSLVSVMTLSLILSHTKKNK
Sequences:
>Translated_825_residues MELVEELCRRLSPSSILDVINKTKIIISLNIIIPVRYSCMLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTD HSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLITALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFL TALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVITLGKKGKFFIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDK RHDWYDMHSYLFVTMVGGGKPTHEQLKTLVTRYAPQLPGAPFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTL YMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGASNYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELI LTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNKSWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQ IDFMQSHMFGYEKENVVTFPLSDELKSLTSLNSLQDELNNSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNI LNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIATKTFMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLA DRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLERYGVNIDQIKLAEHIHQEYFNDHNLMKKTISLVTLFSVILL LISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIKENITPVLVAIVIAFPIGFILLQKWLSKYNFINNLSYLYAFGS LLLFMVSLVSVMTLSLILSHTKKNK >Mature_825_residues MELVEELCRRLSPSSILDVINKTKIIISLNIIIPVRYSCMLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTD HSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLITALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFL TALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVITLGKKGKFFIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDK RHDWYDMHSYLFVTMVGGGKPTHEQLKTLVTRYAPQLPGAPFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTL YMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGASNYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELI LTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNKSWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQ IDFMQSHMFGYEKENVVTFPLSDELKSLTSLNSLQDELNNSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNI LNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIATKTFMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLA DRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLERYGVNIDQIKLAEHIHQEYFNDHNLMKKTISLVTLFSVILL LISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIKENITPVLVAIVIAFPIGFILLQKWLSKYNFINNLSYLYAFGS LLLFMVSLVSVMTLSLILSHTKKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94051; Mature: 94051
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELVEELCRRLSPSSILDVINKTKIIISLNIIIPVRYSCMLTSEFLNDVKLSPMATLLAI CCHHHHHHHHCCHHHHHHHHCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHH IITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLITA HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHH LQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFLTALNPYRQKIPHLSHNEIII HCCCCCHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHCCHHHHHCCCCCCCEEEE TPEFNRQYLHLNHPKGQVITLGKKGKFFIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDK EECCCCCEEEEECCCCCEEEECCCCCCHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHC RHDWYDMHSYLFVTMVGGGKPTHEQLKTLVTRYAPQLPGAPFSPEEFIQLSARNITDIHY CCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEE DAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGASN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCC YQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELILTQETGRLISSFSVAFFSLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAILISHYLYLSTSVFPNKSWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHH IDFMQSHMFGYEKENVVTFPLSDELKSLTSLNSLQDELNNSIGISPIALSSWRPFDMSRT HHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHH TTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIATKTF HHHHHHCCCHHHCCEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCEEHHHHHHH MSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLADRDKNTTPLLILISDEVQRY HHHHCCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHC GALKLHHQSDLSTVKMLLERYGVNIDQIKLAEHIHQEYFNDHNLMKKTISLVTLFSVILL CCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIKENITPVLVAIVIAFPIGFILLQ HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILSHTKKNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MELVEELCRRLSPSSILDVINKTKIIISLNIIIPVRYSCMLTSEFLNDVKLSPMATLLAI CCHHHHHHHHCCHHHHHHHHCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHH IITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLITA HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHH LQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFLTALNPYRQKIPHLSHNEIII HCCCCCHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHCCHHHHHCCCCCCCEEEE TPEFNRQYLHLNHPKGQVITLGKKGKFFIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDK EECCCCCEEEEECCCCCEEEECCCCCCHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHC RHDWYDMHSYLFVTMVGGGKPTHEQLKTLVTRYAPQLPGAPFSPEEFIQLSARNITDIHY CCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEE DAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGASN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCC YQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELILTQETGRLISSFSVAFFSLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAILISHYLYLSTSVFPNKSWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHH IDFMQSHMFGYEKENVVTFPLSDELKSLTSLNSLQDELNNSIGISPIALSSWRPFDMSRT HHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHH TTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIATKTF HHHHHHCCCHHHCCEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCEEHHHHHHH MSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLADRDKNTTPLLILISDEVQRY HHHHCCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHC GALKLHHQSDLSTVKMLLERYGVNIDQIKLAEHIHQEYFNDHNLMKKTISLVTLFSVILL CCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIKENITPVLVAIVIAFPIGFILLQ HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILSHTKKNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA