| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is ysuG [H]
Identifier: 22126517
GI number: 22126517
Start: 2904979
End: 2906868
Strand: Reverse
Name: ysuG [H]
Synonym: y2638
Alternate gene names: 22126517
Gene position: 2906868-2904979 (Counterclockwise)
Preceding gene: 22126518
Following gene: 22126511
Centisome position: 63.18
GC content: 46.98
Gene sequence:
>1890_bases TTGCACCCGGGAACAATATCGCCTTGCCTTACAAAAGGAGCATCAATGATGATGGACTTATCAGCGCCTCTCTCCCCGCA CCAGAGTTTGGAACTCCCCCATTTGCAGCCGGTACTGTGGCAAAAAGTGAATCGCTTGCACTTGTGTAAAGCTATTTCTG AGTTTTCCCACGAGTGCTTGTTGGCTCCCCAACGGATGACAGATCACCCTGATAGTGAGGGATATGATTACTATCAGTTG GTGGCGGCGGCGGCGGACAAGCCGGCGAACTATGTTTTTCGTGCTCGTCGCTTGGCACTGGATCACTGGTTGATTGACCC AGATTCGTTGCATAAAACCGTTAATGAAAAGAGCACAGATTTAGATTTACTGTTATTTATCATTGAGTTCAAGCGGCAAT TGAGCATCAGTGAGCGAGTATTGCCGACCTATTTGGAGGAAATTACCAGCACGTTGTACAGCAGCGCATTTAAACACTGC CGCACAGGGATAAGTGCTACCGCCTTGGTGAATGCCAGCTTTCAGATAATAGAAAAGGAAATGATGGAGGGGCATCCTTC CTTTGTCGCTAATAATGGGCGTATTGGTTTTGATGCTCAGGACTTTCAGAGATTTAGCCCGGAAGCCGCATCAGATGTGC ATCTGGTCTGGCTCGCCGCCCATAAAAGTAAGGCGCATTTTGCCTGCATTGAACAACTCGATTACGCGAAGTTGATGGAA CAGGAACTCGGGGCGGAGGTACTGGCCGAATTTGAACAGCAATTAATAGCCAGAGACTGTAATCCTCAGGATTATGTGCT GATGCCGGTGCATCCGTGGCAGTGGCAGAATAAACTGACTTCGATATTCGCGGCTGATATTGCTAATCAAAGGTTGGTAT TTTTGGGGCAGGGCAAAGATGCTTATCAGGCACAGCAATCTATTCGTACTTTCTTTAATCGCAGCCACCCGCAGCGATAT TACGTAAAAATGGCGTTATCGATCCTGAATATGGGGTTTATGCGCGGTTTATCACCCTACTATATGGCAACGACACCAGG AATTAACGAATGGCTGTTTGACTTGGTTGAAGGCGATGAAATATTGCAAGCGTATGATTTCAAGATTTTGCGTGAAGTGG CCAGTATTGGTTTTCGCAATAGCTATTATGAGCAGGCGATCACCGGGGATTCAGCATATAAAAAGATGGCCGCTGCACTG TGGCGGGAGAATCCGCTGCAATTAATTCAACCCGGTCAGCAACTGATGACGATGGCCGCCTTGTTACATTTGGATCAAGA AGGGAAAGCGCTACTGCCTGCGTTGATTGATGCATCCGGGTTATCCACTCAGCAATGGCTGGAACGTTATTTGCGTAGCT ATTTGTCACCGCTATTACATTGTTTATATGTTTACGATTTGATGTTTATGCCCCACGGTGAAAATATCATTTTGGTTCTA CAGAATGCCGTGCCGCAACATATTTTCATGAAAGATCTGGCGGAAGAAATTTTGGTGCTGAACACTGAGGCTGATTTGCC GGAGAAAGCCCGGCGCATCATCGTGGATATGCCCGATGAGATGAAAACCCTGACGATCCTCAGTGATGTGTTCGACGGTG TATTCCGCTATTTAGCCGCAGTCTTGGATCAACAAGGGGATTATCCTGAGCGCTATTTCTGGGCGGATGTTGCGGCCTGT ATCCGCCAGTACCAGCAGCAGTATCCTGAATTAGCCGCTAAATTTGCGAGCTATCCGTTGTTTACACCCAAAATTAAACG CTGTTGTTTGAACCGCTTACAGCTCAACAATAACCAGCACATGCTGGATTTAGCTGACCCTGTGCAAAGTTTTCAGTTTG CTGATGATTTGATCAATCCGTTGGTAGAATTCGAGGTATCAGCGGGTTAG
Upstream 100 bases:
>100_bases CTGACGTGCGTAATGAAAAAATCCATCGCTTAAATAAACGAGCGGGTTTTGTCTATCAACAGCAACTGACATTACCCCAT AAAACCGCTTGGTTGGCGTT
Downstream 100 bases:
>100_bases CGCTTAATAAATTAGTCGGTCGTTAATAAACCAATAGACCGTTATAAGCAGTCGACCGTTATAAACCAATAGACCGGCAC CGTTGAGGAGCCTTTCAGGG
Product: siderophore biosynthetic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MHPGTISPCLTKGASMMMDLSAPLSPHQSLELPHLQPVLWQKVNRLHLCKAISEFSHECLLAPQRMTDHPDSEGYDYYQL VAAAADKPANYVFRARRLALDHWLIDPDSLHKTVNEKSTDLDLLLFIIEFKRQLSISERVLPTYLEEITSTLYSSAFKHC RTGISATALVNASFQIIEKEMMEGHPSFVANNGRIGFDAQDFQRFSPEAASDVHLVWLAAHKSKAHFACIEQLDYAKLME QELGAEVLAEFEQQLIARDCNPQDYVLMPVHPWQWQNKLTSIFAADIANQRLVFLGQGKDAYQAQQSIRTFFNRSHPQRY YVKMALSILNMGFMRGLSPYYMATTPGINEWLFDLVEGDEILQAYDFKILREVASIGFRNSYYEQAITGDSAYKKMAAAL WRENPLQLIQPGQQLMTMAALLHLDQEGKALLPALIDASGLSTQQWLERYLRSYLSPLLHCLYVYDLMFMPHGENIILVL QNAVPQHIFMKDLAEEILVLNTEADLPEKARRIIVDMPDEMKTLTILSDVFDGVFRYLAAVLDQQGDYPERYFWADVAAC IRQYQQQYPELAAKFASYPLFTPKIKRCCLNRLQLNNNQHMLDLADPVQSFQFADDLINPLVEFEVSAG
Sequences:
>Translated_629_residues MHPGTISPCLTKGASMMMDLSAPLSPHQSLELPHLQPVLWQKVNRLHLCKAISEFSHECLLAPQRMTDHPDSEGYDYYQL VAAAADKPANYVFRARRLALDHWLIDPDSLHKTVNEKSTDLDLLLFIIEFKRQLSISERVLPTYLEEITSTLYSSAFKHC RTGISATALVNASFQIIEKEMMEGHPSFVANNGRIGFDAQDFQRFSPEAASDVHLVWLAAHKSKAHFACIEQLDYAKLME QELGAEVLAEFEQQLIARDCNPQDYVLMPVHPWQWQNKLTSIFAADIANQRLVFLGQGKDAYQAQQSIRTFFNRSHPQRY YVKMALSILNMGFMRGLSPYYMATTPGINEWLFDLVEGDEILQAYDFKILREVASIGFRNSYYEQAITGDSAYKKMAAAL WRENPLQLIQPGQQLMTMAALLHLDQEGKALLPALIDASGLSTQQWLERYLRSYLSPLLHCLYVYDLMFMPHGENIILVL QNAVPQHIFMKDLAEEILVLNTEADLPEKARRIIVDMPDEMKTLTILSDVFDGVFRYLAAVLDQQGDYPERYFWADVAAC IRQYQQQYPELAAKFASYPLFTPKIKRCCLNRLQLNNNQHMLDLADPVQSFQFADDLINPLVEFEVSAG >Mature_629_residues MHPGTISPCLTKGASMMMDLSAPLSPHQSLELPHLQPVLWQKVNRLHLCKAISEFSHECLLAPQRMTDHPDSEGYDYYQL VAAAADKPANYVFRARRLALDHWLIDPDSLHKTVNEKSTDLDLLLFIIEFKRQLSISERVLPTYLEEITSTLYSSAFKHC RTGISATALVNASFQIIEKEMMEGHPSFVANNGRIGFDAQDFQRFSPEAASDVHLVWLAAHKSKAHFACIEQLDYAKLME QELGAEVLAEFEQQLIARDCNPQDYVLMPVHPWQWQNKLTSIFAADIANQRLVFLGQGKDAYQAQQSIRTFFNRSHPQRY YVKMALSILNMGFMRGLSPYYMATTPGINEWLFDLVEGDEILQAYDFKILREVASIGFRNSYYEQAITGDSAYKKMAAAL WRENPLQLIQPGQQLMTMAALLHLDQEGKALLPALIDASGLSTQQWLERYLRSYLSPLLHCLYVYDLMFMPHGENIILVL QNAVPQHIFMKDLAEEILVLNTEADLPEKARRIIVDMPDEMKTLTILSDVFDGVFRYLAAVLDQQGDYPERYFWADVAAC IRQYQQQYPELAAKFASYPLFTPKIKRCCLNRLQLNNNQHMLDLADPVQSFQFADDLINPLVEFEVSAG
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: NA
Molecular weight: Translated: 71897; Mature: 71897
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPGTISPCLTKGASMMMDLSAPLSPHQSLELPHLQPVLWQKVNRLHLCKAISEFSHECL CCCCCCCHHHHCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHH LAPQRMTDHPDSEGYDYYQLVAAAADKPANYVFRARRLALDHWLIDPDSLHKTVNEKSTD CCCHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC LDLLLFIIEFKRQLSISERVLPTYLEEITSTLYSSAFKHCRTGISATALVNASFQIIEKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MMEGHPSFVANNGRIGFDAQDFQRFSPEAASDVHLVWLAAHKSKAHFACIEQLDYAKLME HHCCCCCEEECCCCCCCCHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH QELGAEVLAEFEQQLIARDCNPQDYVLMPVHPWQWQNKLTSIFAADIANQRLVFLGQGKD HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCH AYQAQQSIRTFFNRSHPQRYYVKMALSILNMGFMRGLSPYYMATTPGINEWLFDLVEGDE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCHH ILQAYDFKILREVASIGFRNSYYEQAITGDSAYKKMAAALWRENPLQLIQPGQQLMTMAA HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHH LLHLDQEGKALLPALIDASGLSTQQWLERYLRSYLSPLLHCLYVYDLMFMPHGENIILVL HHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE QNAVPQHIFMKDLAEEILVLNTEADLPEKARRIIVDMPDEMKTLTILSDVFDGVFRYLAA CCCCCHHHHHHHHHHHHEEECCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH VLDQQGDYPERYFWADVAACIRQYQQQYPELAAKFASYPLFTPKIKRCCLNRLQLNNNQH HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC MLDLADPVQSFQFADDLINPLVEFEVSAG EEEHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHPGTISPCLTKGASMMMDLSAPLSPHQSLELPHLQPVLWQKVNRLHLCKAISEFSHECL CCCCCCCHHHHCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHH LAPQRMTDHPDSEGYDYYQLVAAAADKPANYVFRARRLALDHWLIDPDSLHKTVNEKSTD CCCHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC LDLLLFIIEFKRQLSISERVLPTYLEEITSTLYSSAFKHCRTGISATALVNASFQIIEKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MMEGHPSFVANNGRIGFDAQDFQRFSPEAASDVHLVWLAAHKSKAHFACIEQLDYAKLME HHCCCCCEEECCCCCCCCHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH QELGAEVLAEFEQQLIARDCNPQDYVLMPVHPWQWQNKLTSIFAADIANQRLVFLGQGKD HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCH AYQAQQSIRTFFNRSHPQRYYVKMALSILNMGFMRGLSPYYMATTPGINEWLFDLVEGDE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCHH ILQAYDFKILREVASIGFRNSYYEQAITGDSAYKKMAAALWRENPLQLIQPGQQLMTMAA HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHH LLHLDQEGKALLPALIDASGLSTQQWLERYLRSYLSPLLHCLYVYDLMFMPHGENIILVL HHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE QNAVPQHIFMKDLAEEILVLNTEADLPEKARRIIVDMPDEMKTLTILSDVFDGVFRYLAA CCCCCHHHHHHHHHHHHEEECCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH VLDQQGDYPERYFWADVAACIRQYQQQYPELAAKFASYPLFTPKIKRCCLNRLQLNNNQH HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC MLDLADPVQSFQFADDLINPLVEFEVSAG EEEHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11274118; 11481432 [H]