| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is ysuA [C]
Identifier: 22126513
GI number: 22126513
Start: 2900843
End: 2901961
Strand: Direct
Name: ysuA [C]
Synonym: y2634
Alternate gene names: 22126513
Gene position: 2900843-2901961 (Clockwise)
Preceding gene: 22126512
Following gene: 22126514
Centisome position: 63.05
GC content: 52.37
Gene sequence:
>1119_bases TTGCCAACGTCTTCAGAAAGCACGATATGGATACACCAAATGAATAAAACGCGAACCTGCACCACATTAGCCCCCCGCTG GTTAGGCGATATTTCTTTTATATTAGCGGGTCTACTTGCGCTATTTTTTTTGCTTTCTGTCGGCGATAGCCAGGCCGAAA CCGGCGCTGTGCACACCACGCAAGCAAACGGTTTCCCACGGAAAATCACCAGCGCACTTGGCACGGCGGTCATTGAGCGT CCACCTCAGCGTATTGTGGCCCTCGGCGCAGGCGCAGAAGACATTGTGCTGGCATTGGGCAAGATCCCGGTGGGTATTGA ATCCCACACATGGGGAGGTGATAAGCAAGGTTATTTGCCTTGGTTCAGACAAGCATTAGAACAACGGGGCGAGCCGCTGC CTCAGGTGCTTAATATGTATCCAGAGTTGGATATTGAGCAGTTAATCAATCTAAAGCCCGATGTGATTATCGCGACTCAG TCAGGGATGAGCCAAAGCCTGTACAACCAACTATCTCGCTTCGCGCCCGTCGTGGCTTATCCCGGCCGGCCGTGGCTGAC CAGCCTCACACAACAAGTTGAATTAATCGGCCAAACACTCGGAGAAGAGTCACAGATCTACCCGTTATTGCAAGAGTTAA AAAACACCTTATCCGCTGCGGGCCAAACGGTTCCGGGGATTAAAAACCTGCGTTTTGCCTACATTAAAGCGGCCAGTAGC AATACCAACTTGTCGGTGTATGTCGCAGGCGACCCACGGGTTGACACCTTAATCGCCACGGGTATGCAACTCGCCCCATC CATCAAAGACCTCATGGCATCGCGAGGCAGCTTTGCTGCTAATCTTGGGCTGGAAAATGCAGATCAGTTGGATGATGCCG ATATTTTAGTCACCTGGTATAGCAGCGAGCAAGAACGGCAGCGGGTTGAAGAAAAGCCCTTATTCAACGCGATGGCTGCC GTGCAACGCGGCGGGTATATCCCGCTGACCGACCAAGCGATTGTCATGGCGATGTCCTATGGCACACCGCTGAGCGTTCA GTGGGGGTTGCAACGCTTTATGCCATTGCTCGCAGAAAAAGCGCGCCATTTGGCTGATACCAAAGAGACACTGCCATGA
Upstream 100 bases:
>100_bases TGTTAGGCGCACCACGCAATGTCGATGCCACCGTGCGCTACACCTTCTAAGGATTGCAGTTGGATACCCTCACAGCCGGC CACTTTTCCGGCTGTATCTT
Downstream 100 bases:
>100_bases TAGATAACACGGTTCAACAATTACGAAAATACCGCATCTTAGGATGGATAGGGTTATTGCTGCTCACATTAATGTGTGTG TTAGTCAGCCTGACTCTCGG
Product: solute-binding periplasmic protein of ABC transporter
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: Twin-Arginine Translocation Pathway Signal; ABC-Type Fe3+ Transport System; ABC-Type Fe3+-Siderophores Transport System; Transport System Permease Protein; ABC-Transport System; Periplasmic Iron-Transport Lipoprotein; Periplasmic IRON-Transport Lipoprotein; ABC-Type Fe3+-Hydroxamate Transport System; Iron ABC Transporter Permease; Lipoprotein
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MPTSSESTIWIHQMNKTRTCTTLAPRWLGDISFILAGLLALFFLLSVGDSQAETGAVHTTQANGFPRKITSALGTAVIER PPQRIVALGAGAEDIVLALGKIPVGIESHTWGGDKQGYLPWFRQALEQRGEPLPQVLNMYPELDIEQLINLKPDVIIATQ SGMSQSLYNQLSRFAPVVAYPGRPWLTSLTQQVELIGQTLGEESQIYPLLQELKNTLSAAGQTVPGIKNLRFAYIKAASS NTNLSVYVAGDPRVDTLIATGMQLAPSIKDLMASRGSFAANLGLENADQLDDADILVTWYSSEQERQRVEEKPLFNAMAA VQRGGYIPLTDQAIVMAMSYGTPLSVQWGLQRFMPLLAEKARHLADTKETLP
Sequences:
>Translated_372_residues MPTSSESTIWIHQMNKTRTCTTLAPRWLGDISFILAGLLALFFLLSVGDSQAETGAVHTTQANGFPRKITSALGTAVIER PPQRIVALGAGAEDIVLALGKIPVGIESHTWGGDKQGYLPWFRQALEQRGEPLPQVLNMYPELDIEQLINLKPDVIIATQ SGMSQSLYNQLSRFAPVVAYPGRPWLTSLTQQVELIGQTLGEESQIYPLLQELKNTLSAAGQTVPGIKNLRFAYIKAASS NTNLSVYVAGDPRVDTLIATGMQLAPSIKDLMASRGSFAANLGLENADQLDDADILVTWYSSEQERQRVEEKPLFNAMAA VQRGGYIPLTDQAIVMAMSYGTPLSVQWGLQRFMPLLAEKARHLADTKETLP >Mature_371_residues PTSSESTIWIHQMNKTRTCTTLAPRWLGDISFILAGLLALFFLLSVGDSQAETGAVHTTQANGFPRKITSALGTAVIERP PQRIVALGAGAEDIVLALGKIPVGIESHTWGGDKQGYLPWFRQALEQRGEPLPQVLNMYPELDIEQLINLKPDVIIATQS GMSQSLYNQLSRFAPVVAYPGRPWLTSLTQQVELIGQTLGEESQIYPLLQELKNTLSAAGQTVPGIKNLRFAYIKAASSN TNLSVYVAGDPRVDTLIATGMQLAPSIKDLMASRGSFAANLGLENADQLDDADILVTWYSSEQERQRVEEKPLFNAMAAV QRGGYIPLTDQAIVMAMSYGTPLSVQWGLQRFMPLLAEKARHLADTKETLP
Specific function: Binds Citrate-Dependent Iron(III); Part Of The Binding- Protein-Dependent Transport System For Uptake Of Citrate-Dependent Iron(III). [C]
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082411, Length=299, Percent_Identity=25.0836120401338, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40649; Mature: 40518
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSSESTIWIHQMNKTRTCTTLAPRWLGDISFILAGLLALFFLLSVGDSQAETGAVHTT CCCCCCCEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE QANGFPRKITSALGTAVIERPPQRIVALGAGAEDIVLALGKIPVGIESHTWGGDKQGYLP CCCCCHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCH WFRQALEQRGEPLPQVLNMYPELDIEQLINLKPDVIIATQSGMSQSLYNQLSRFAPVVAY HHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEEEC PGRPWLTSLTQQVELIGQTLGEESQIYPLLQELKNTLSAAGQTVPGIKNLRFAYIKAASS CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEEEEECC NTNLSVYVAGDPRVDTLIATGMQLAPSIKDLMASRGSFAANLGLENADQLDDADILVTWY CCCEEEEECCCCCHHHHHHHCHHHCHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEC SSEQERQRVEEKPLFNAMAAVQRGGYIPLTDQAIVMAMSYGTPLSVQWGLQRFMPLLAEK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHH ARHLADTKETLP HHHHHHHHHCCC >Mature Secondary Structure PTSSESTIWIHQMNKTRTCTTLAPRWLGDISFILAGLLALFFLLSVGDSQAETGAVHTT CCCCCCEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE QANGFPRKITSALGTAVIERPPQRIVALGAGAEDIVLALGKIPVGIESHTWGGDKQGYLP CCCCCHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCH WFRQALEQRGEPLPQVLNMYPELDIEQLINLKPDVIIATQSGMSQSLYNQLSRFAPVVAY HHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEEEC PGRPWLTSLTQQVELIGQTLGEESQIYPLLQELKNTLSAAGQTVPGIKNLRFAYIKAASS CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEEEEECC NTNLSVYVAGDPRVDTLIATGMQLAPSIKDLMASRGSFAANLGLENADQLDDADILVTWY CCCEEEEECCCCCHHHHHHHCHHHCHHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEC SSEQERQRVEEKPLFNAMAAVQRGGYIPLTDQAIVMAMSYGTPLSVQWGLQRFMPLLAEK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHH ARHLADTKETLP HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA