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The map label for this gene is yiiZ [H]

Identifier: 22126466

GI number: 22126466

Start: 2847737

End: 2848681

Strand: Direct

Name: yiiZ [H]

Synonym: y2585

Alternate gene names: 22126466

Gene position: 2847737-2848681 (Clockwise)

Preceding gene: 22126463

Following gene: 22126467

Centisome position: 61.9

GC content: 44.23

Gene sequence:

>945_bases
TTGTTACTGAGCCAAGTGCTATTTAGCCAATCCGCAACTGCCCAACAAATTAAAGCAGCCGATGTTCATCCTAAAGATTA
TCCCAATGTCGTGGCGATGAAAGATATGGGCGAAAAACTAAAAGTCGCGACTGATGGCCGTCTGGAGATGAAAACATTTC
CTGGTGGAGTATTAGGTGATGAGAAGCAAATGATAGAACAGGCGCAAATGGGGGCAATCGATATTATTCGTGTATCCATG
ACACCCGTTGCCTCTATTTTACCGGAGATTAATGTCTTTACCCTCCCCTATATCTTCCGCGACGAAGATCATTTACATAA
GGTCCTTGATGGTAAAATTGGTCAGGAAATAGGCGGTAAAATCACCGATAACAAAAATTCAAAATTGGTGTTCTTAGGTT
GGATGGATGGCGGTACCCGTCACCTGATTACTAAACAACCAGTGATTAAACCGGAAGATCTCAGCGGGATGAAAATCCGT
GTTCAAGGCAGCCCGATTGCGTTAGCAACGCTAAAATCAATGGGGGCCAATGCCCTGAGTATGGGCGTCAGTGAAGTGTT
CAGCGGTATGCAAACCGGGGTCATTGATGGCACCGAAAATAACCAGCCTACATTTGTAGCCCATAATTACCTGCCTGTTG
TCAAAAATTATACCCTGAGCGGCCATTTCATTATTCCCGAAGTATTCCTGTATTCGAAAGCCAAGTGGGACAAATTATCT
GCCGAAGATCAGCAAACCATTCTTAAATTAGCAAAAGAAGCACAAGCTGAGCAACGCGTATTATGGACAGCCTATGAGCA
ACAAGCTCATGAGAAAATGAAGGCCGGCGGTGTGCAGTATCATGAGATTGATCGTGATTATTATTATAAAGCCACTCAGC
CCGTACGCGATGAGTTCGGCAAAGGTCATGAGGACTTGATTAAACAGATTGGTGACGTCCAATAA

Upstream 100 bases:

>100_bases
ACACCGCTGCAACGTCAAATATGAAGGGTATTCTACCTCTGGAGATCATTGAATGAGATTGCCAACGTCTTTCCCTACAT
TATGTTTAACCGCCTCGGCG

Downstream 100 bases:

>100_bases
CATCCATCCGGCGGTATTGAATTATTTTTAATACCGCTGATATTACCCAACGCCATTGCCGTTGCAATAAGGCTGCTAAC
GCCACTGCAACGCCAAGGAC

Product: periplasmic binding protein of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLLSQVLFSQSATAQQIKAADVHPKDYPNVVAMKDMGEKLKVATDGRLEMKTFPGGVLGDEKQMIEQAQMGAIDIIRVSM
TPVASILPEINVFTLPYIFRDEDHLHKVLDGKIGQEIGGKITDNKNSKLVFLGWMDGGTRHLITKQPVIKPEDLSGMKIR
VQGSPIALATLKSMGANALSMGVSEVFSGMQTGVIDGTENNQPTFVAHNYLPVVKNYTLSGHFIIPEVFLYSKAKWDKLS
AEDQQTILKLAKEAQAEQRVLWTAYEQQAHEKMKAGGVQYHEIDRDYYYKATQPVRDEFGKGHEDLIKQIGDVQ

Sequences:

>Translated_314_residues
MLLSQVLFSQSATAQQIKAADVHPKDYPNVVAMKDMGEKLKVATDGRLEMKTFPGGVLGDEKQMIEQAQMGAIDIIRVSM
TPVASILPEINVFTLPYIFRDEDHLHKVLDGKIGQEIGGKITDNKNSKLVFLGWMDGGTRHLITKQPVIKPEDLSGMKIR
VQGSPIALATLKSMGANALSMGVSEVFSGMQTGVIDGTENNQPTFVAHNYLPVVKNYTLSGHFIIPEVFLYSKAKWDKLS
AEDQQTILKLAKEAQAEQRVLWTAYEQQAHEKMKAGGVQYHEIDRDYYYKATQPVRDEFGKGHEDLIKQIGDVQ
>Mature_314_residues
MLLSQVLFSQSATAQQIKAADVHPKDYPNVVAMKDMGEKLKVATDGRLEMKTFPGGVLGDEKQMIEQAQMGAIDIIRVSM
TPVASILPEINVFTLPYIFRDEDHLHKVLDGKIGQEIGGKITDNKNSKLVFLGWMDGGTRHLITKQPVIKPEDLSGMKIR
VQGSPIALATLKSMGANALSMGVSEVFSGMQTGVIDGTENNQPTFVAHNYLPVVKNYTLSGHFIIPEVFLYSKAKWDKLS
AEDQQTILKLAKEAQAEQRVLWTAYEQQAHEKMKAGGVQYHEIDRDYYYKATQPVRDEFGKGHEDLIKQIGDVQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=290, Percent_Identity=33.448275862069, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 34934; Mature: 34934

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSQVLFSQSATAQQIKAADVHPKDYPNVVAMKDMGEKLKVATDGRLEMKTFPGGVLGD
CCHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCCC
EKQMIEQAQMGAIDIIRVSMTPVASILPEINVFTLPYIFRDEDHLHKVLDGKIGQEIGGK
HHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEEEECEEECCHHHHHHHHCCHHHHHHCCE
ITDNKNSKLVFLGWMDGGTRHLITKQPVIKPEDLSGMKIRVQGSPIALATLKSMGANALS
EECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEHHHHHCCCHHHH
MGVSEVFSGMQTGVIDGTENNQPTFVAHNYLPVVKNYTLSGHFIIPEVFLYSKAKWDKLS
HHHHHHHCCHHHCEECCCCCCCCEEEEECCEEHHHCEEECCEEEHHHHHHHCCCCCCCCC
AEDQQTILKLAKEAQAEQRVLWTAYEQQAHEKMKAGGVQYHEIDRDYYYKATQPVRDEFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCHHHHHC
KGHEDLIKQIGDVQ
CCHHHHHHHHCCCC
>Mature Secondary Structure
MLLSQVLFSQSATAQQIKAADVHPKDYPNVVAMKDMGEKLKVATDGRLEMKTFPGGVLGD
CCHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCCC
EKQMIEQAQMGAIDIIRVSMTPVASILPEINVFTLPYIFRDEDHLHKVLDGKIGQEIGGK
HHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEEEECEEECCHHHHHHHHCCHHHHHHCCE
ITDNKNSKLVFLGWMDGGTRHLITKQPVIKPEDLSGMKIRVQGSPIALATLKSMGANALS
EECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEHHHHHCCCHHHH
MGVSEVFSGMQTGVIDGTENNQPTFVAHNYLPVVKNYTLSGHFIIPEVFLYSKAKWDKLS
HHHHHHHCCHHHCEECCCCCCCCEEEEECCEEHHHCEEECCEEEHHHHHHHCCCCCCCCC
AEDQQTILKLAKEAQAEQRVLWTAYEQQAHEKMKAGGVQYHEIDRDYYYKATQPVRDEFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCHHHHHC
KGHEDLIKQIGDVQ
CCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]