| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is fcuA [H]
Identifier: 22126437
GI number: 22126437
Start: 2817540
End: 2819870
Strand: Reverse
Name: fcuA [H]
Synonym: y2556
Alternate gene names: 22126437
Gene position: 2819870-2817540 (Counterclockwise)
Preceding gene: 22126438
Following gene: 22126431
Centisome position: 61.29
GC content: 48.86
Gene sequence:
>2331_bases ATGATAAGCATTCGTATTACTGTTAGGTGTATAGGCTTTATGGGTATCAACACGATGAATCAGTCTCTCTCCATAAGTAC GGAGCCGAAACGTTCGGCTCCTCGTCTTTTGTGCGTCATGATCGGCGTAGCATTAGGATCTTTATCCGCATCTTCATGGT CCGCAGCAGTGGCTAACAGTACTAAAACGGCCAGCGCAGTCGCAGAGACCAACAGCGCCGAGAGTAGCAATAAAGCGGAT ACCATTACCGTGGTTGGGACACCAGACACGTTTCGTGCAGGGGGGAATGATTTGATCCCGACCTATCTGGATGGACAGGT GGCTAATGGTGGCCGTATTGGTTTTCTGGGGCAGCAAGATGCCCGTAACGTGCCATTCAATATTATCGGTTACACCTCGA AAATGATCGAAGATCAGCAAGCGGCGACCATTGCTGATGTGGTCAAAAATGACGCTTCGGTACAAAACGTGCGGGGTTAT GGTAACCCATCACAGAATTACCGTATTCGTGGTTTTAATCTGGATGGCGACGATATTTCATTCGGTGGTTTATTTGGTGT GCTACCGCGCCAGATTGTTTCTACCAGCATGGTTGAACGAGTCGAAGTCTTTAAAGGAGCTAATGCCTTTATTAACGGTA TCTCGCCAAGTGGCAGTGGCGTTGGAGGCATGATTAATCTGGAACCTAAACGTGCCGGTGATACGCCATTGACTCGCGTT ACTGTGGATTATGGTTCAGCAGCGCAAGTGGGGGGAGGGCTGGATGTGGGACGTCGCTATGGTGATAACGATCAATATGG CGTGCGGGTTAACGTACTGCATCGTGAAGGTGAAACGGCCATCAAAGATGAGAAGAATCGCCTAACCGCGGTGTCTACCG GCCTTGACTACCGTAGTGATCGCGCGCGGACCTCATTGGATGTGGGTTACCAAAAGCAAACTATTCATCATATGCGTACC ACCGTGGGTGTCGGTGCGGTGACCGTTATTCCTGAACCGCCGTCAACCACACTGAACTATGGTCAACCGTGGGTTTATAC CGATTTGGAGACCACGTTTGGTATGTTGCGTAGCGAGTATGATGTTAGCCAGAACTGGACGGTTTATGGTTCCATCGGGG CCAGCCATAACGAAGAAACGGGGCAATACGGCTCGCCAATCCTGACGGATAACAGCGGCAATGCGACGATCAGCCGTTTA TATGTGCCTTATATTTCTGAGTCTATTGCCGGTTTAGGTGGTATTCGTGGGCATTTTGATACTGGTTTTATCACCCATAA AGTGAATTTAGGGTATGCAACTAATTATCGGACAACCAAATCTGCCTTTAATATGTCCGAGAGTATCAATACCAATATCT ATAATCCGGGGGTCATACCTTTCCCGCCAACATCGACTAATCCCAATTTTTATAGTCCCAACCAAGATCCTACGTTGACG AGTCAAGTTAGGGCTTCCGGCTTCTCATTGTCCGATACCTTATCGATGATGGATGACAAAGTTCAGCTGATGCTGGGGGT ACGCCGCCAGGATGTCACTATCCGTAATTTTAATAATGGCGTACCAAACAGTGCTGGCTCATTAGATGCGATGAAAGTGA CGCCAATTTATGGTGTGCTGGTGAGGCCATGGGAGAAGGTGTCTCTGTATGCCAACCATATTGAAGCGTTGGGGCCGGGT AAGTCTGCGCCAAATGAATTTAACGGCAAGCCGGTGGTCAACAAAGGCCAAATCCCTGGTATTGTTCACTCCAAACAAAA TGAAGTCGGCGTGAAATTCGATAACCAGCGCTATGGCGGGACATTGGCTTTATTTGAAATTACCCGCCCGACGGGCACGG TTGATCCCGCGACCAATACTTATGGTTTCTATGGCGAACAGCGTAACCGGGGTGTTGAACTGAATGTCTTTGGTGAGCCG GTATTGGGTACTCGTTTGTTAGGGAGTGCGGTTTGGTTAGATCCTAAACTGACTAAAACCCAAAATGGGACGAACAACGG TAACTATGCTGTCGGTGTTGCTCGTTACCAATTAGTGTTCGGCGGCGAGTACGATATCCCTTCAGTAGAAGGGCTGACCG CCACTGGCACCCTGACACGTTCTGGATCCCAGTATGCCAATGATGCGAATACCTTGAAAATTAAACCGTGGACCCGCCTG GATCTGGGCGTGCGCTATACCATGCCAATGAAAGAGACTAACCTGATATGGCGCGCTAACCTTGAAAACGTGACTAACGA GCGTTATTGGGAATCGATAGAAGATAGCGGCGTTTACCTGTATCAGGGCGATCCACGTACGCTGAAATTATCCGTCTCCA TGGACTTCTGA
Upstream 100 bases:
>100_bases AACCCTGTCTCTCGCGATAGCCAAAAAAGCCAGGAAACGAGCGACTGAAATACATAAAGGCTTGCATTGGCAAAGGTTAT ACGGATAATCCCCAATCCTT
Downstream 100 bases:
>100_bases TAAGTTGCGGCGACTTTGCTGAAATAGTGATTGAGTGAACTGTTGTTTACTAAACAGGTGCTTTACTGAAATCCCCCGGC GATTTGATATATCGCCGGGG
Product: ferrichrome receptor, TonB dependent
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 776; Mature: 776
Protein sequence:
>776_residues MISIRITVRCIGFMGINTMNQSLSISTEPKRSAPRLLCVMIGVALGSLSASSWSAAVANSTKTASAVAETNSAESSNKAD TITVVGTPDTFRAGGNDLIPTYLDGQVANGGRIGFLGQQDARNVPFNIIGYTSKMIEDQQAATIADVVKNDASVQNVRGY GNPSQNYRIRGFNLDGDDISFGGLFGVLPRQIVSTSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRV TVDYGSAAQVGGGLDVGRRYGDNDQYGVRVNVLHREGETAIKDEKNRLTAVSTGLDYRSDRARTSLDVGYQKQTIHHMRT TVGVGAVTVIPEPPSTTLNYGQPWVYTDLETTFGMLRSEYDVSQNWTVYGSIGASHNEETGQYGSPILTDNSGNATISRL YVPYISESIAGLGGIRGHFDTGFITHKVNLGYATNYRTTKSAFNMSESINTNIYNPGVIPFPPTSTNPNFYSPNQDPTLT SQVRASGFSLSDTLSMMDDKVQLMLGVRRQDVTIRNFNNGVPNSAGSLDAMKVTPIYGVLVRPWEKVSLYANHIEALGPG KSAPNEFNGKPVVNKGQIPGIVHSKQNEVGVKFDNQRYGGTLALFEITRPTGTVDPATNTYGFYGEQRNRGVELNVFGEP VLGTRLLGSAVWLDPKLTKTQNGTNNGNYAVGVARYQLVFGGEYDIPSVEGLTATGTLTRSGSQYANDANTLKIKPWTRL DLGVRYTMPMKETNLIWRANLENVTNERYWESIEDSGVYLYQGDPRTLKLSVSMDF
Sequences:
>Translated_776_residues MISIRITVRCIGFMGINTMNQSLSISTEPKRSAPRLLCVMIGVALGSLSASSWSAAVANSTKTASAVAETNSAESSNKAD TITVVGTPDTFRAGGNDLIPTYLDGQVANGGRIGFLGQQDARNVPFNIIGYTSKMIEDQQAATIADVVKNDASVQNVRGY GNPSQNYRIRGFNLDGDDISFGGLFGVLPRQIVSTSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRV TVDYGSAAQVGGGLDVGRRYGDNDQYGVRVNVLHREGETAIKDEKNRLTAVSTGLDYRSDRARTSLDVGYQKQTIHHMRT TVGVGAVTVIPEPPSTTLNYGQPWVYTDLETTFGMLRSEYDVSQNWTVYGSIGASHNEETGQYGSPILTDNSGNATISRL YVPYISESIAGLGGIRGHFDTGFITHKVNLGYATNYRTTKSAFNMSESINTNIYNPGVIPFPPTSTNPNFYSPNQDPTLT SQVRASGFSLSDTLSMMDDKVQLMLGVRRQDVTIRNFNNGVPNSAGSLDAMKVTPIYGVLVRPWEKVSLYANHIEALGPG KSAPNEFNGKPVVNKGQIPGIVHSKQNEVGVKFDNQRYGGTLALFEITRPTGTVDPATNTYGFYGEQRNRGVELNVFGEP VLGTRLLGSAVWLDPKLTKTQNGTNNGNYAVGVARYQLVFGGEYDIPSVEGLTATGTLTRSGSQYANDANTLKIKPWTRL DLGVRYTMPMKETNLIWRANLENVTNERYWESIEDSGVYLYQGDPRTLKLSVSMDF >Mature_776_residues MISIRITVRCIGFMGINTMNQSLSISTEPKRSAPRLLCVMIGVALGSLSASSWSAAVANSTKTASAVAETNSAESSNKAD TITVVGTPDTFRAGGNDLIPTYLDGQVANGGRIGFLGQQDARNVPFNIIGYTSKMIEDQQAATIADVVKNDASVQNVRGY GNPSQNYRIRGFNLDGDDISFGGLFGVLPRQIVSTSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRV TVDYGSAAQVGGGLDVGRRYGDNDQYGVRVNVLHREGETAIKDEKNRLTAVSTGLDYRSDRARTSLDVGYQKQTIHHMRT TVGVGAVTVIPEPPSTTLNYGQPWVYTDLETTFGMLRSEYDVSQNWTVYGSIGASHNEETGQYGSPILTDNSGNATISRL YVPYISESIAGLGGIRGHFDTGFITHKVNLGYATNYRTTKSAFNMSESINTNIYNPGVIPFPPTSTNPNFYSPNQDPTLT SQVRASGFSLSDTLSMMDDKVQLMLGVRRQDVTIRNFNNGVPNSAGSLDAMKVTPIYGVLVRPWEKVSLYANHIEALGPG KSAPNEFNGKPVVNKGQIPGIVHSKQNEVGVKFDNQRYGGTLALFEITRPTGTVDPATNTYGFYGEQRNRGVELNVFGEP VLGTRLLGSAVWLDPKLTKTQNGTNNGNYAVGVARYQLVFGGEYDIPSVEGLTATGTLTRSGSQYANDANTLKIKPWTRL DLGVRYTMPMKETNLIWRANLENVTNERYWESIEDSGVYLYQGDPRTLKLSVSMDF
Specific function: Receptor for the hydroxamate siderophore, ferrichrome. Binds also to most other ferrichrome derivatives except enantio ferrichrome and ferric rhodotorulate [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 84092; Mature: 84092
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISIRITVRCIGFMGINTMNQSLSISTEPKRSAPRLLCVMIGVALGSLSASSWSAAVANS CEEEEEEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCC TKTASAVAETNSAESSNKADTITVVGTPDTFRAGGNDLIPTYLDGQVANGGRIGFLGQQD CCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCEECCCCEEEECCCCC ARNVPFNIIGYTSKMIEDQQAATIADVVKNDASVQNVRGYGNPSQNYRIRGFNLDGDDIS CCCCCEEEEECHHHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECCCCCCCC FGGLFGVLPRQIVSTSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRV CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEE TVDYGSAAQVGGGLDVGRRYGDNDQYGVRVNVLHREGETAIKDEKNRLTAVSTGLDYRSD EEECCCCCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCC RARTSLDVGYQKQTIHHMRTTVGVGAVTVIPEPPSTTLNYGQPWVYTDLETTFGMLRSEY CCCCEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHC DVSQNWTVYGSIGASHNEETGQYGSPILTDNSGNATISRLYVPYISESIAGLGGIRGHFD CCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEEEEHHHHHHHHHCCCCCCCCC TGFITHKVNLGYATNYRTTKSAFNMSESINTNIYNPGVIPFPPTSTNPNFYSPNQDPTLT CCEEEEEEECCEECCCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHH SQVRASGFSLSDTLSMMDDKVQLMLGVRRQDVTIRNFNNGVPNSAGSLDAMKVTPIYGVL HHHHHCCCCHHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEECCEEEEE VRPWEKVSLYANHIEALGPGKSAPNEFNGKPVVNKGQIPGIVHSKQNEVGVKFDNQRYGG ECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCC TLALFEITRPTGTVDPATNTYGFYGEQRNRGVELNVFGEPVLGTRLLGSAVWLDPKLTKT EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCEEEECCCCCCC QNGTNNGNYAVGVARYQLVFGGEYDIPSVEGLTATGTLTRSGSQYANDANTLKIKPWTRL CCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEECEEECCCCCCCCCCCEEEECCCEEE DLGVRYTMPMKETNLIWRANLENVTNERYWESIEDSGVYLYQGDPRTLKLSVSMDF ECCEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCEEEEEEEECC >Mature Secondary Structure MISIRITVRCIGFMGINTMNQSLSISTEPKRSAPRLLCVMIGVALGSLSASSWSAAVANS CEEEEEEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCC TKTASAVAETNSAESSNKADTITVVGTPDTFRAGGNDLIPTYLDGQVANGGRIGFLGQQD CCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCEECCCCEEEECCCCC ARNVPFNIIGYTSKMIEDQQAATIADVVKNDASVQNVRGYGNPSQNYRIRGFNLDGDDIS CCCCCEEEEECHHHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECCCCCCCC FGGLFGVLPRQIVSTSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRV CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEE TVDYGSAAQVGGGLDVGRRYGDNDQYGVRVNVLHREGETAIKDEKNRLTAVSTGLDYRSD EEECCCCCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCC RARTSLDVGYQKQTIHHMRTTVGVGAVTVIPEPPSTTLNYGQPWVYTDLETTFGMLRSEY CCCCEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHC DVSQNWTVYGSIGASHNEETGQYGSPILTDNSGNATISRLYVPYISESIAGLGGIRGHFD CCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEEEEHHHHHHHHHCCCCCCCCC TGFITHKVNLGYATNYRTTKSAFNMSESINTNIYNPGVIPFPPTSTNPNFYSPNQDPTLT CCEEEEEEECCEECCCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHH SQVRASGFSLSDTLSMMDDKVQLMLGVRRQDVTIRNFNNGVPNSAGSLDAMKVTPIYGVL HHHHHCCCCHHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEECCEEEEE VRPWEKVSLYANHIEALGPGKSAPNEFNGKPVVNKGQIPGIVHSKQNEVGVKFDNQRYGG ECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCC TLALFEITRPTGTVDPATNTYGFYGEQRNRGVELNVFGEPVLGTRLLGSAVWLDPKLTKT EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCEEEECCCCCCC QNGTNNGNYAVGVARYQLVFGGEYDIPSVEGLTATGTLTRSGSQYANDANTLKIKPWTRL CCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEECEEECCCCCCCCCCCEEEECCCEEE DLGVRYTMPMKETNLIWRANLENVTNERYWESIEDSGVYLYQGDPRTLKLSVSMDF ECCEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8384682 [H]