| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126355
Identifier: 22126355
GI number: 22126355
Start: 2736225
End: 2737130
Strand: Direct
Name: 22126355
Synonym: y2472
Alternate gene names: NA
Gene position: 2736225-2737130 (Clockwise)
Preceding gene: 22126354
Following gene: 22126356
Centisome position: 59.47
GC content: 43.16
Gene sequence:
>906_bases ATGAGGTTTGAAGTGCTAAAACGTGAAAAAGAAATTGCTTTCTTACGTCGTCATCGCACGATTATCGCCAATGAGGCTGA GCAACAACAACTGTCTGATGAATTACACCAGTTAGATGATGATTTCTATTTTATCGCTCATTGCAATGTCGGTGGCGAAT TTATGTCTGATGAGGCGATAGCCCGGATCCAGCATATTGCCCGCTATCATTGGACCAGAACCTTGGATGATACCGCAGGC ATTTCAAATGAAGAGCGAGTACGCAAAGACAGGCAACCAATCAGCGCCTTACCTGTGCAAGAGCCCATGTTAGCGGATAA AGAAGAGCATATTATTTATCGAGATAATAAAAATAAACGTTCAGAATATGATGATTTTAAAGTTAAAGAACCAACCTTCC TTTATAACCGAGGGGAAATTTACAATCTCTGTATTCGACGCGGTACGCTTACCGAAGAAGATCGCTATAAGATTAATGAG CATATTATGCAGACCATTGTGATGCTCAAAAAGCTGCCATTCCCTCGTTCCATGGCGAATGTCCCCGTTATTGCTGGCGG CCATCATGAGCGTATGGATGGTAAAGGTTATCCTTATCAGCTCACCCGTAGCCAAATGAGTATTCCTGTCCGTATGATGG CCATAGCTGATGTTTTCGAGGCACTCACCGCAGCCGATCGGCCTTATAAATCGGGAAAAATGTTATCAGAAGCCCTTAAT ATCATGGTGAGTATGGTGAATGAAAGCCATCTGGATCGGGAACTGTTTATCTTATTTCTGCAATCAGGTATCTGGCATGA CTATGCTGCGGCTTATTTACACGCCGAGAAAGTCGATAGTATTGATATCACTATTCTGCTGCAAAGAGTCTGTTATCAAT CTGTCTCGCTGCCTGAATCGGCCTAA
Upstream 100 bases:
>100_bases TTGCTGGTTACATGATTGCGGCAAAATAACCACGCCAGAGTTTGTCGTCGATAAATCGACCAAATTAGAGTTAATCTATG ACCGTATTCACGAAATACGC
Downstream 100 bases:
>100_bases AAATATTGACTAAAAAGAGCAAGAATCAGAGGATAATAACGAGCCGTTCACGCTATGCTTAATCGCTACCGGCCTCCTGG TCAGTACGTATTTTATCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; HD-GYP Domain-Containing Protein; Chemotaxis Sensory Transducer Family Protein; HAMP Domain Protein; Methyl-Accepting Chemotaxis Protein; HDIG Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Subdomain; GAF Domain-Containing Protein; Chemotactic Transducer-Related Protein; Metal-Dependent Phosphohydrolase HD Region; HD Domain-Containing Protein; HD-Domain-Containing Protein; Metal-Dependent Phosphohydrolase Hd Subdomain; Integral Membrane Protein Two-Component Signal Transducer; HAMP Domain-Containing Protein; ABC-Type Amino Acid Transport Signal Transduction Systems; Fused HD-GYP/HD-Hydrolase Domain-Containing Protein; Fusion HD-GYP Domain And HD-Hydrolase Domain; Metal Dependent Phosphohydrolase With Gaf Sensor; HD Domain Protein; HD-GYP/GAF Domain-Containing Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase; Response Regulator; GAF Containing Protein; HD-GYP Domain Protein; Chemotaxis Protein; Replicative DNA Helicase; HDIG Domain Protein; Response Regulator With HD-GYP Domain; GAF Domain Protein; Metal Dependent Phosphohydrolase HD Region; Sensor Histidine Kinase/GAF Domain-Containing Protein
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MRFEVLKREKEIAFLRRHRTIIANEAEQQQLSDELHQLDDDFYFIAHCNVGGEFMSDEAIARIQHIARYHWTRTLDDTAG ISNEERVRKDRQPISALPVQEPMLADKEEHIIYRDNKNKRSEYDDFKVKEPTFLYNRGEIYNLCIRRGTLTEEDRYKINE HIMQTIVMLKKLPFPRSMANVPVIAGGHHERMDGKGYPYQLTRSQMSIPVRMMAIADVFEALTAADRPYKSGKMLSEALN IMVSMVNESHLDRELFILFLQSGIWHDYAAAYLHAEKVDSIDITILLQRVCYQSVSLPESA
Sequences:
>Translated_301_residues MRFEVLKREKEIAFLRRHRTIIANEAEQQQLSDELHQLDDDFYFIAHCNVGGEFMSDEAIARIQHIARYHWTRTLDDTAG ISNEERVRKDRQPISALPVQEPMLADKEEHIIYRDNKNKRSEYDDFKVKEPTFLYNRGEIYNLCIRRGTLTEEDRYKINE HIMQTIVMLKKLPFPRSMANVPVIAGGHHERMDGKGYPYQLTRSQMSIPVRMMAIADVFEALTAADRPYKSGKMLSEALN IMVSMVNESHLDRELFILFLQSGIWHDYAAAYLHAEKVDSIDITILLQRVCYQSVSLPESA >Mature_301_residues MRFEVLKREKEIAFLRRHRTIIANEAEQQQLSDELHQLDDDFYFIAHCNVGGEFMSDEAIARIQHIARYHWTRTLDDTAG ISNEERVRKDRQPISALPVQEPMLADKEEHIIYRDNKNKRSEYDDFKVKEPTFLYNRGEIYNLCIRRGTLTEEDRYKINE HIMQTIVMLKKLPFPRSMANVPVIAGGHHERMDGKGYPYQLTRSQMSIPVRMMAIADVFEALTAADRPYKSGKMLSEALN IMVSMVNESHLDRELFILFLQSGIWHDYAAAYLHAEKVDSIDITILLQRVCYQSVSLPESA
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35111; Mature: 35111
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFEVLKREKEIAFLRRHRTIIANEAEQQQLSDELHQLDDDFYFIAHCNVGGEFMSDEAI CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH ARIQHIARYHWTRTLDDTAGISNEERVRKDRQPISALPVQEPMLADKEEHIIYRDNKNKR HHHHHHHHHHHHCCCCHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCC SEYDDFKVKEPTFLYNRGEIYNLCIRRGTLTEEDRYKINEHIMQTIVMLKKLPFPRSMAN CCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC VPVIAGGHHERMDGKGYPYQLTRSQMSIPVRMMAIADVFEALTAADRPYKSGKMLSEALN CCEEECCCCCCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH IMVSMVNESHLDRELFILFLQSGIWHDYAAAYLHAEKVDSIDITILLQRVCYQSVSLPES HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC A C >Mature Secondary Structure MRFEVLKREKEIAFLRRHRTIIANEAEQQQLSDELHQLDDDFYFIAHCNVGGEFMSDEAI CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH ARIQHIARYHWTRTLDDTAGISNEERVRKDRQPISALPVQEPMLADKEEHIIYRDNKNKR HHHHHHHHHHHHCCCCHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCC SEYDDFKVKEPTFLYNRGEIYNLCIRRGTLTEEDRYKINEHIMQTIVMLKKLPFPRSMAN CCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC VPVIAGGHHERMDGKGYPYQLTRSQMSIPVRMMAIADVFEALTAADRPYKSGKMLSEALN CCEEECCCCCCCCCCCCCEEECCHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH IMVSMVNESHLDRELFILFLQSGIWHDYAAAYLHAEKVDSIDITILLQRVCYQSVSLPES HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA