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The map label for this gene is ybjZ [C]

Identifier: 22126249

GI number: 22126249

Start: 2607994

End: 2609214

Strand: Reverse

Name: ybjZ [C]

Synonym: y2365

Alternate gene names: 22126249

Gene position: 2609214-2607994 (Counterclockwise)

Preceding gene: 22126250

Following gene: 22126248

Centisome position: 56.71

GC content: 49.71

Gene sequence:

>1221_bases
TTGGCACCTGGTTCCCCGCTCGTCGTATTACTCGCCTCTACCCGGTGGAGGTGCTATATGGCCGGTAATCATCATAAAGG
CAATGATGGCATGAAAGGCAATGATAGTATGTTTTGGCGGTTGGTGCTGCGTGCGCTTCGTTTACGTATGCAACGTGTCA
GTGTCGTCTTTGCCGCACTGACCGTTGGCGCGGCGATTGTTACCGCAATGTCGGCAGTCTATTTCGATATTAATGCCAAA
ATGAGTCAGGAATTACGGACATTCGGCGCTAATTTTTATATTGGCCCAGGCCAGGGTAGTACCTTTGAACAGCAGACTTT
TCAACCCATTATTGATTCCGCGCCGAAAGGTCTGATTAATGCTTCCAGTCCCTATATTTATGGTATGGCTCGTACCGAGC
TGGAAAAAGTGGTTTTGATGGGCGTCTGGTTTGAATCCTTGCAACAGTTAGTCCCCTATTGGCAGGTAACCGGCAATTGG
ATCGGGGTCAGTTTTGATGATCGCAATGCGATGATCGGTGCCAAACTGGCGGAACGTTTGCATGTCAATGTAGGCGATAC
CCTAACATTGGTGGGCGAAGGGACCCGCCAACGCTTACAAATAAAAGGTATTGTTGAAGCAGGTGACGCGACCGATAACA
TGTTGATCGTCAATTTGGAGCTGGCGCAAAAGTGGCTCAATCAACCTGAGCGGATCAGTAATGCATTACTGAGTGTCAGC
AATGATGTTGGGCAGGTAGAAACCTTTGCCAGTCATCTACGCGAACAATATCCAGATCTGGAAATTCGCCCAATTCGCAA
AGTATCTGCCTCTGAGGGGCAGGTTCTTGACAAGATAAAAGGGTTGATGGGGCTGGTCTCGGTGGTCATCCTCATTCTCT
CCTCTCTGTGTGTCAATACCACGTTGATGGCGATAGTGGGTGAACGTTCGAAAGAGTTTGCGTTGCAAAAAGCACTGGGT
GCCAGTGGGCGTGACATTATCCGCCAAATGTTGACTGAAACGATGATTATTTCGCTAGCCGCCGCGGTCTGTGGTGCTGT
GTTAGGGTATTTGCTGGCTCAGGTCTTGGGGCAGGCGGTGTTCAGTGCGGCAATTACATTGCGTGCACCGGTATTGCCGC
TAACCTTGGTGCTTTCGTTGTTTGTTGCCGCTGTGGCGGCGATTGTTCCCACCCGACGGGCTATTCATATTGAACCCGCT
AAAGTTCTTAAAGGAGAGTAG

Upstream 100 bases:

>100_bases
TTAGCCAAAACCATTGGGCTGATGCTATTCGGTGCGCCGATCAGTTTCGCCTGGATGGTCGTGCCTTGTGTGTTGGTGCT
ATCGGTATTGATAGCCGTGT

Downstream 100 bases:

>100_bases
CGAATGACCTCGTCAATCATAGGGATGAAACCTGAACATCTGGCTGATGCCGTTATTGAAACCCGACATTTGTATAAGCG
CTTTGGTCAAGTTACGGCAC

Product: integral membrane protein

Products: NA

Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Permease Protein; ABC Efflux Pump Inner Membrane Subunit; Integral Membrane Protein; Efflux ABC Transporter Permease; Lipoprotein ABC Transporter Permease; Permease Domain-Containing Protein; Efflux ABC Transporter Permease Protein; Integral Membrane Protein Putative Permease; Integral Membrane Protein-Permease Component; Hydrogenase 4 Membrane Subunit; ABC-Type Transport System Permease Component; ABC Transporter; Outer Membrane Protein Putative Permease

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MAPGSPLVVLLASTRWRCYMAGNHHKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAK
MSQELRTFGANFYIGPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNW
IGVSFDDRNAMIGAKLAERLHVNVGDTLTLVGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVS
NDVGQVETFASHLREQYPDLEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALG
ASGRDIIRQMLTETMIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPA
KVLKGE

Sequences:

>Translated_406_residues
MAPGSPLVVLLASTRWRCYMAGNHHKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAK
MSQELRTFGANFYIGPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNW
IGVSFDDRNAMIGAKLAERLHVNVGDTLTLVGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVS
NDVGQVETFASHLREQYPDLEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALG
ASGRDIIRQMLTETMIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPA
KVLKGE
>Mature_405_residues
APGSPLVVLLASTRWRCYMAGNHHKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAALTVGAAIVTAMSAVYFDINAKM
SQELRTFGANFYIGPGQGSTFEQQTFQPIIDSAPKGLINASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWI
GVSFDDRNAMIGAKLAERLHVNVGDTLTLVGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVSN
DVGQVETFASHLREQYPDLEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNTTLMAIVGERSKEFALQKALGA
SGRDIIRQMLTETMIISLAAAVCGAVLGYLLAQVLGQAVFSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAK
VLKGE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44149; Mature: 44018

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPGSPLVVLLASTRWRCYMAGNHHKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAAL
CCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TVGAAIVTAMSAVYFDINAKMSQELRTFGANFYIGPGQGSTFEQQTFQPIIDSAPKGLIN
HHHHHHHHHHHHHHEECCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEE
ASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAERL
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCEEEEEECCCCCHHHHHHHHHH
HVNVGDTLTLVGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVS
CCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHC
NDVGQVETFASHLREQYPDLEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNT
CCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLMAIVGERSKEFALQKALGASGRDIIRQMLTETMIISLAAAVCGAVLGYLLAQVLGQAV
HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCC
>Mature Secondary Structure 
APGSPLVVLLASTRWRCYMAGNHHKGNDGMKGNDSMFWRLVLRALRLRMQRVSVVFAAL
CCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TVGAAIVTAMSAVYFDINAKMSQELRTFGANFYIGPGQGSTFEQQTFQPIIDSAPKGLIN
HHHHHHHHHHHHHHEECCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEE
ASSPYIYGMARTELEKVVLMGVWFESLQQLVPYWQVTGNWIGVSFDDRNAMIGAKLAERL
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCEEEEEECCCCCHHHHHHHHHH
HVNVGDTLTLVGEGTRQRLQIKGIVEAGDATDNMLIVNLELAQKWLNQPERISNALLSVS
CCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHC
NDVGQVETFASHLREQYPDLEIRPIRKVSASEGQVLDKIKGLMGLVSVVILILSSLCVNT
CCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLMAIVGERSKEFALQKALGASGRDIIRQMLTETMIISLAAAVCGAVLGYLLAQVLGQAV
HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSAAITLRAPVLPLTLVLSLFVAAVAAIVPTRRAIHIEPAKVLKGE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA