| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126226
Identifier: 22126226
GI number: 22126226
Start: 2577224
End: 2578117
Strand: Direct
Name: 22126226
Synonym: y2341
Alternate gene names: NA
Gene position: 2577224-2578117 (Clockwise)
Preceding gene: 161484791
Following gene: 22126235
Centisome position: 56.02
GC content: 49.33
Gene sequence:
>894_bases TTGGCCCTTATCACACCCAGCCGAGTTAGCTTATTGGTTAGGAGGGCAATTACCTGCCACTGTCGTATTCCGAGGAGAAG TACGCCCATGAATTTAACTGACTCTTACTACTTTCAGGGCGGAAAAATACCTTTGCTCATTAGCATTCCACATGCAGGTA CACGCCTGACTCCCGCAGTTGAAGCTGGCCTGACAGCAGCAGCACAGCCTTTATCCGATACAGATTGGCATATCCATCGT CTCTATGACTTTGCCCGTGAGATGGGCGCCAGTGTTTTAATCGGCCAGTATTCCCGCTTGGTGGTCGATCTTAACCGACC GCAAGATGACCAACCACTCTATGCTACTGCGACCACCGGGCTATTCCCCGAAACACTGTTTGATGGGCGCGCTTGTTTTG AAGCAGGTAAAACACCTTCACCAAATGAGCGGCAATCCTACTTAACGCATATCTGGCAGCCTTATCATCAGCGGCTTCAG CAAGAGCTTGCCAGATTAAGTGCGCAATTTGGCTATGCACTCCTTCTAGACGCACACTCTATTGCGTCCGTTATTCCTCG GTTATTTGATGGGCAACTTCCTGATTTGAACATCGGCACTAACGACAATGCCAGTTGCCTACTTTCGTTAACTGAACAGC TCATTGCGTGCTGCCAGCGTCAAACGGCATTCAGCCACGTACTCAATGGCCGTTTTAAAGGCGGGTATATCACTCGCACA TATGGATTACCACAAAACCACCACCATGCGGTGCAACTAGAATTAGCGCAGTTAAACTATATGTCGGAGACCGAGCCTTA CGCTTATCGGCCTGATCGAGCCATTCATTTACAGCAATTGCTCCAGCAGTTCATCACAACCATGCTGACGTGGGGTGAGC AAACTTACCGTTGA
Upstream 100 bases:
>100_bases AAGAAGCACTGGCTGGTGTCACGTGCCACGCAGCTCAAGCTCTTGGTGTACAACAGACTCAAGGTACGTTGGAGACAGGG AAATTAGCTAACTGGGTGCA
Downstream 100 bases:
>100_bases TAGCACACCTATTACTTGATTACTTGATTACTTGATATTACAGCCTTGACTTGGCAAAGGTGTGAGCGGCGGGTTCTCAT GCTGATCAACACCACTCAAA
Product: histidine degradation enzyme
Products: L-glutamate; formamide
Alternate protein names: N-Formylglutamate Deformylase; N-Formylglutamate Amidohydrolase Family Protein; Hydrolase; Formylglutamate Amidohydrolase; N-Formylglutamate Amidohydrolase Superfamily; Formiminoglutamase; Formiminoglutamase Protein; Amidohydrolase; N-Formylglutamate Amidohydrolase HutG; Formylglutamte Amindohyrolase; Histidine Degradation; N-Formylglutamate Amidohydrolase Family; HutG Protein; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate_deformylase Protein; N-Formylglutamate Deformylase Family Protein
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MALITPSRVSLLVRRAITCHCRIPRRSTPMNLTDSYYFQGGKIPLLISIPHAGTRLTPAVEAGLTAAAQPLSDTDWHIHR LYDFAREMGASVLIGQYSRLVVDLNRPQDDQPLYATATTGLFPETLFDGRACFEAGKTPSPNERQSYLTHIWQPYHQRLQ QELARLSAQFGYALLLDAHSIASVIPRLFDGQLPDLNIGTNDNASCLLSLTEQLIACCQRQTAFSHVLNGRFKGGYITRT YGLPQNHHHAVQLELAQLNYMSETEPYAYRPDRAIHLQQLLQQFITTMLTWGEQTYR
Sequences:
>Translated_297_residues MALITPSRVSLLVRRAITCHCRIPRRSTPMNLTDSYYFQGGKIPLLISIPHAGTRLTPAVEAGLTAAAQPLSDTDWHIHR LYDFAREMGASVLIGQYSRLVVDLNRPQDDQPLYATATTGLFPETLFDGRACFEAGKTPSPNERQSYLTHIWQPYHQRLQ QELARLSAQFGYALLLDAHSIASVIPRLFDGQLPDLNIGTNDNASCLLSLTEQLIACCQRQTAFSHVLNGRFKGGYITRT YGLPQNHHHAVQLELAQLNYMSETEPYAYRPDRAIHLQQLLQQFITTMLTWGEQTYR >Mature_296_residues ALITPSRVSLLVRRAITCHCRIPRRSTPMNLTDSYYFQGGKIPLLISIPHAGTRLTPAVEAGLTAAAQPLSDTDWHIHRL YDFAREMGASVLIGQYSRLVVDLNRPQDDQPLYATATTGLFPETLFDGRACFEAGKTPSPNERQSYLTHIWQPYHQRLQQ ELARLSAQFGYALLLDAHSIASVIPRLFDGQLPDLNIGTNDNASCLLSLTEQLIACCQRQTAFSHVLNGRFKGGYITRTY GLPQNHHHAVQLELAQLNYMSETEPYAYRPDRAIHLQQLLQQFITTMLTWGEQTYR
Specific function: Unknown
COG id: COG3741
COG function: function code E; N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.3.8
Molecular weight: Translated: 33554; Mature: 33422
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALITPSRVSLLVRRAITCHCRIPRRSTPMNLTDSYYFQGGKIPLLISIPHAGTRLTPAV CCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCHHH EAGLTAAAQPLSDTDWHIHRLYDFAREMGASVLIGQYSRLVVDLNRPQDDQPLYATATTG HHCCHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCEEEEECCC LFPETLFDGRACFEAGKTPSPNERQSYLTHIWQPYHQRLQQELARLSAQFGYALLLDAHS CCHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHH IASVIPRLFDGQLPDLNIGTNDNASCLLSLTEQLIACCQRQTAFSHVLNGRFKGGYITRT HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE YGLPQNHHHAVQLELAQLNYMSETEPYAYRPDRAIHLQQLLQQFITTMLTWGEQTYR ECCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure ALITPSRVSLLVRRAITCHCRIPRRSTPMNLTDSYYFQGGKIPLLISIPHAGTRLTPAV CCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCHHH EAGLTAAAQPLSDTDWHIHRLYDFAREMGASVLIGQYSRLVVDLNRPQDDQPLYATATTG HHCCHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCEEEEECCC LFPETLFDGRACFEAGKTPSPNERQSYLTHIWQPYHQRLQQELARLSAQFGYALLLDAHS CCHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHH IASVIPRLFDGQLPDLNIGTNDNASCLLSLTEQLIACCQRQTAFSHVLNGRFKGGYITRT HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE YGLPQNHHHAVQLELAQLNYMSETEPYAYRPDRAIHLQQLLQQFITTMLTWGEQTYR ECCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-formimidoyl-L-glutamate; H2O
Specific reaction: N-formimidoyl-L-glutamate + H2O = L-glutamate + formamide
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA