| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126211
Identifier: 22126211
GI number: 22126211
Start: 2562115
End: 2563302
Strand: Reverse
Name: 22126211
Synonym: y2326
Alternate gene names: NA
Gene position: 2563302-2562115 (Counterclockwise)
Preceding gene: 22126212
Following gene: 22126208
Centisome position: 55.71
GC content: 50.59
Gene sequence:
>1188_bases ATGAAGACGTTAGATGATTTGATCCCCCCGGCTACCCGCTGTATCGATCTGCTGGCCCCGCCTTTTTCTGGGCACTTACA CCCGATACTGGCGTTGGGCCGCATGTTGGCTAAAAATTACGAGGTACGCATCATCAGCACGCAAGATGCGTTGGCGCGTA TCACGGCGGCAGGGCTAAAGGGCATTGCTTTGCCGGGTGAATATGACCCGCTGTTACAGGCAATTGCCAACCCAGACTAT GCGGTTAAAAGCAGTCCGCTGAAGCTTTATCGCCAATTTAAATCTGCGGTTGGGTTACTCGTCGAGTTTGCCTCGGCACT GGAAAAACTTTATCAACATGATGGTGCGCCAGACCTGGTTATTGCTGACTTTACTTTACCCGTGGTAGGGACGGTGAGTA AAAAATTGGGCATCCCTTGGTGGACGAGTTTACCCTCACCCTGTGTGCTGGAAACGTTAGACGGCCCACCGGCCTATTGC GGTGGCCTTTATCCAGCGAAAACTGCTATGGATAACGTCAGTCAGTTTATCGCGCGGAAAAAAGTCCGTTGGTTTAAAAA AACGCTTTTTTGGTTATTCCGTAGAACAATCTCAACAACCGGGATCACGGCGTTATATCGCGCCGATGGTACAGAAAGTG CTTATTCAGCAGACTGTATTCTGGCTCTGGGTGATGTCGCATTTGAATTTACCCGAACCTGGCCGGAGAGCGTCCATTTT ATTGGGCCAGCGCTCTATACACCGCCTAATTTGCAGCCTGCGCCGCACTTTGAAGCAGGTCGCCGCCATGTGCTGGTGAC CTTAGGGACTCATCTGGCCTGGCATAAAGATGAAGTGGTAAAGGCGGTTGAGAGACTTGCCCGAACCATGCCAGAGTCAG TTTTTCATTTCACAGAGGGGGATCCGAACGCGGCTTGCCATCAGCAGACCGATAATTTCATCCGCTTGCCATGGATAGAT TATGAAACCTGTCTTGGTCACTACGATGTGGTGATTCATCATGGTGGTGCAGGAATTCTGTATTACTGTCTGAAACATAA TATACCGGCGTTGGTCTATCCGGTTGATTTCGATCAATTTGACCATGCTGCCCGCCTTGATGCGTCGGGGAAAGGTCTTT GGTTAAAAGGGGGGCTGAGCGCGTTGGCGAATGCCAAAACTCAGATTGAGCAGTTAACTGCCCGTTAG
Upstream 100 bases:
>100_bases GCAAAGTCAGTGGTGGCCATTTGAATTATCTCTCTAACCCAGCATTACTGACGCTTTGTGAGCGTTTTATTGCGGCAGTT GAATCAACTCAGGGATTGCG
Downstream 100 bases:
>100_bases GGATAAAAATAACGTAAAGGAGTAGGTTGCCGACAAAGTCAAATGAAGGCGAAATAGTGTGAGGCGGGGCGATTTAACCA ACGTTCGGATGATCCACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MKTLDDLIPPATRCIDLLAPPFSGHLHPILALGRMLAKNYEVRIISTQDALARITAAGLKGIALPGEYDPLLQAIANPDY AVKSSPLKLYRQFKSAVGLLVEFASALEKLYQHDGAPDLVIADFTLPVVGTVSKKLGIPWWTSLPSPCVLETLDGPPAYC GGLYPAKTAMDNVSQFIARKKVRWFKKTLFWLFRRTISTTGITALYRADGTESAYSADCILALGDVAFEFTRTWPESVHF IGPALYTPPNLQPAPHFEAGRRHVLVTLGTHLAWHKDEVVKAVERLARTMPESVFHFTEGDPNAACHQQTDNFIRLPWID YETCLGHYDVVIHHGGAGILYYCLKHNIPALVYPVDFDQFDHAARLDASGKGLWLKGGLSALANAKTQIEQLTAR
Sequences:
>Translated_395_residues MKTLDDLIPPATRCIDLLAPPFSGHLHPILALGRMLAKNYEVRIISTQDALARITAAGLKGIALPGEYDPLLQAIANPDY AVKSSPLKLYRQFKSAVGLLVEFASALEKLYQHDGAPDLVIADFTLPVVGTVSKKLGIPWWTSLPSPCVLETLDGPPAYC GGLYPAKTAMDNVSQFIARKKVRWFKKTLFWLFRRTISTTGITALYRADGTESAYSADCILALGDVAFEFTRTWPESVHF IGPALYTPPNLQPAPHFEAGRRHVLVTLGTHLAWHKDEVVKAVERLARTMPESVFHFTEGDPNAACHQQTDNFIRLPWID YETCLGHYDVVIHHGGAGILYYCLKHNIPALVYPVDFDQFDHAARLDASGKGLWLKGGLSALANAKTQIEQLTAR >Mature_395_residues MKTLDDLIPPATRCIDLLAPPFSGHLHPILALGRMLAKNYEVRIISTQDALARITAAGLKGIALPGEYDPLLQAIANPDY AVKSSPLKLYRQFKSAVGLLVEFASALEKLYQHDGAPDLVIADFTLPVVGTVSKKLGIPWWTSLPSPCVLETLDGPPAYC GGLYPAKTAMDNVSQFIARKKVRWFKKTLFWLFRRTISTTGITALYRADGTESAYSADCILALGDVAFEFTRTWPESVHF IGPALYTPPNLQPAPHFEAGRRHVLVTLGTHLAWHKDEVVKAVERLARTMPESVFHFTEGDPNAACHQQTDNFIRLPWID YETCLGHYDVVIHHGGAGILYYCLKHNIPALVYPVDFDQFDHAARLDASGKGLWLKGGLSALANAKTQIEQLTAR
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43627; Mature: 43627
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLDDLIPPATRCIDLLAPPFSGHLHPILALGRMLAKNYEVRIISTQDALARITAAGLK CCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCC GIALPGEYDPLLQAIANPDYAVKSSPLKLYRQFKSAVGLLVEFASALEKLYQHDGAPDLV CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IADFTLPVVGTVSKKLGIPWWTSLPSPCVLETLDGPPAYCGGLYPAKTAMDNVSQFIARK EEEECCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHH KVRWFKKTLFWLFRRTISTTGITALYRADGTESAYSADCILALGDVAFEFTRTWPESVHF HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH IGPALYTPPNLQPAPHFEAGRRHVLVTLGTHLAWHKDEVVKAVERLARTMPESVFHFTEG HCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHCHHHHEECCCC DPNAACHQQTDNFIRLPWIDYETCLGHYDVVIHHGGAGILYYCLKHNIPALVYPVDFDQF CCCCHHHHCCCCEEECCCCCHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHC DHAARLDASGKGLWLKGGLSALANAKTQIEQLTAR CCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTLDDLIPPATRCIDLLAPPFSGHLHPILALGRMLAKNYEVRIISTQDALARITAAGLK CCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCC GIALPGEYDPLLQAIANPDYAVKSSPLKLYRQFKSAVGLLVEFASALEKLYQHDGAPDLV CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IADFTLPVVGTVSKKLGIPWWTSLPSPCVLETLDGPPAYCGGLYPAKTAMDNVSQFIARK EEEECCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHH KVRWFKKTLFWLFRRTISTTGITALYRADGTESAYSADCILALGDVAFEFTRTWPESVHF HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH IGPALYTPPNLQPAPHFEAGRRHVLVTLGTHLAWHKDEVVKAVERLARTMPESVFHFTEG HCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHCHHHHEECCCC DPNAACHQQTDNFIRLPWIDYETCLGHYDVVIHHGGAGILYYCLKHNIPALVYPVDFDQF CCCCHHHHCCCCEEECCCCCHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHC DHAARLDASGKGLWLKGGLSALANAKTQIEQLTAR CCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA