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The map label for this gene is ycdX [C]

Identifier: 22126161

GI number: 22126161

Start: 2511071

End: 2511919

Strand: Reverse

Name: ycdX [C]

Synonym: y2275

Alternate gene names: 22126161

Gene position: 2511919-2511071 (Counterclockwise)

Preceding gene: 22126162

Following gene: 22126160

Centisome position: 54.6

GC content: 49.12

Gene sequence:

>849_bases
TTGGCACTGCTGATGAGAAGAATTCCTGCTATCATTAGCGGACTATATTTTATCTGCCAGAAACCAACCTGCAAAAAGCC
ATTTCGCCTTGAAAGATGTTGTGGAGTAGTTATGTATCCTGTTGATTTACATATGCATACCGTTGCCAGTACCCATGCTT
ACAGTACCCTACACGATTATATCGCCGAAGCTAAACTGAAGAATATCAAACTGTTCGCGATTACGGACCATGGCCCTGAT
ATGGCTGATGCGCCTCATTACTGGCATTTTATGAATATGCGCGTATGGCCACGGTTGGTTGATGGTGTTGGTATTTTGCG
GGGTATTGAAGCCAATATTAAGAATCTGGACGGAGATATCGATTGTACTGGCCCGATGCTTGATGCAGTCGATTTGCTGA
TTGCGGGTTTCCATGAACCCGTGTTTCCGCCGCAAGATAAAGCCGCCAACACGCAGGCGATGATCGCCACGATGGCTCAG
GGGAATGTGCATATTATTAGCCACCCTGGTAATCCTAAGTACCCCGTTGATATCCCGGCGATTGCACAAGCGGCGGCAAA
ATATAATGTCGCGTTGGAATTAAATAACTCATCGTTTGCGCATTCACGCAAGGGGAGTGAGGCGAATTGCCGTGCTATTG
CCGCCGCCGTTCGTGATGCCGGAGGCTGGTTGGCATTGGGTTCAGACTCGCATATTGCCTACGCTCTGGGAATTTTCGAG
CACTGTGAGCGTATTATTGCCGAAGTGAATTTTCCACAAGAGCGCATTCTGAATGTCAGCCCGCGCCGCTTACTGGATTA
TCTGGAGCAGCGTGGTCGCCCAGCGATCCCCGAGCTAGCAGAGCTGTAA

Upstream 100 bases:

>100_bases
TTCTGAATGCTTTATCACTGTTTAGCTAAAGTTATAGCAATTTGCTGATTTCATCGGCATTTATTGAGGGATACATAGGC
TGTCGGGCAAGGCATGGCTT

Downstream 100 bases:

>100_bases
GTCATATTAAAACACCGAAGAAATAGGATGATGTAAATGAATGATTTTTCGCTGATGTGTCGGATCCTCGGATCACTGTT
TTATCGTCAGCCGCAAGACC

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MALLMRRIPAIISGLYFICQKPTCKKPFRLERCCGVVMYPVDLHMHTVASTHAYSTLHDYIAEAKLKNIKLFAITDHGPD
MADAPHYWHFMNMRVWPRLVDGVGILRGIEANIKNLDGDIDCTGPMLDAVDLLIAGFHEPVFPPQDKAANTQAMIATMAQ
GNVHIISHPGNPKYPVDIPAIAQAAAKYNVALELNNSSFAHSRKGSEANCRAIAAAVRDAGGWLALGSDSHIAYALGIFE
HCERIIAEVNFPQERILNVSPRRLLDYLEQRGRPAIPELAEL

Sequences:

>Translated_282_residues
MALLMRRIPAIISGLYFICQKPTCKKPFRLERCCGVVMYPVDLHMHTVASTHAYSTLHDYIAEAKLKNIKLFAITDHGPD
MADAPHYWHFMNMRVWPRLVDGVGILRGIEANIKNLDGDIDCTGPMLDAVDLLIAGFHEPVFPPQDKAANTQAMIATMAQ
GNVHIISHPGNPKYPVDIPAIAQAAAKYNVALELNNSSFAHSRKGSEANCRAIAAAVRDAGGWLALGSDSHIAYALGIFE
HCERIIAEVNFPQERILNVSPRRLLDYLEQRGRPAIPELAEL
>Mature_281_residues
ALLMRRIPAIISGLYFICQKPTCKKPFRLERCCGVVMYPVDLHMHTVASTHAYSTLHDYIAEAKLKNIKLFAITDHGPDM
ADAPHYWHFMNMRVWPRLVDGVGILRGIEANIKNLDGDIDCTGPMLDAVDLLIAGFHEPVFPPQDKAANTQAMIATMAQG
NVHIISHPGNPKYPVDIPAIAQAAAKYNVALELNNSSFAHSRKGSEANCRAIAAAVRDAGGWLALGSDSHIAYALGIFEH
CERIIAEVNFPQERILNVSPRRLLDYLEQRGRPAIPELAEL

Specific function: Unknown

COG id: COG1387

COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHP family [H]

Homologues:

Organism=Escherichia coli, GI1787271, Length=245, Percent_Identity=76.3265306122449, Blast_Score=389, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31168; Mature: 31037

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLMRRIPAIISGLYFICQKPTCKKPFRLERCCGVVMYPVDLHMHTVASTHAYSTLHDY
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHH
IAEAKLKNIKLFAITDHGPDMADAPHYWHFMNMRVWPRLVDGVGILRGIEANIKNLDGDI
HHHHHHCCEEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCHHHHHHCCCCC
DCTGPMLDAVDLLIAGFHEPVFPPQDKAANTQAMIATMAQGNVHIISHPGNPKYPVDIPA
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEECCCCEEEEECCCCCCCCCCCHH
IAQAAAKYNVALELNNSSFAHSRKGSEANCRAIAAAVRDAGGWLALGSDSHIAYALGIFE
HHHHHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
HCERIIAEVNFPQERILNVSPRRLLDYLEQRGRPAIPELAEL
HHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHCC
>Mature Secondary Structure 
ALLMRRIPAIISGLYFICQKPTCKKPFRLERCCGVVMYPVDLHMHTVASTHAYSTLHDY
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHH
IAEAKLKNIKLFAITDHGPDMADAPHYWHFMNMRVWPRLVDGVGILRGIEANIKNLDGDI
HHHHHHCCEEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCHHHHHHCCCCC
DCTGPMLDAVDLLIAGFHEPVFPPQDKAANTQAMIATMAQGNVHIISHPGNPKYPVDIPA
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEECCCCEEEEECCCCCCCCCCCHH
IAQAAAKYNVALELNNSSFAHSRKGSEANCRAIAAAVRDAGGWLALGSDSHIAYALGIFE
HHHHHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
HCERIIAEVNFPQERILNVSPRRLLDYLEQRGRPAIPELAEL
HHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA