| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is mviM [C]
Identifier: 22126156
GI number: 22126156
Start: 2505361
End: 2506971
Strand: Reverse
Name: mviM [C]
Synonym: y2270
Alternate gene names: 22126156
Gene position: 2506971-2505361 (Counterclockwise)
Preceding gene: 22126157
Following gene: 22126155
Centisome position: 54.49
GC content: 49.72
Gene sequence:
>1611_bases ATGAAACACAACTTAAATGCACATGAAGCCCGTGTTATCGGCTGTTTATTGGAAAAACAAGTGACAACACCGGAACAATA TCCGATGTCACTCAATGGACTCACTCTCGCTTGTAATCAAAAAACCAGCCGTGATCCTGTAATGGAATTATCCGAATCAC AAGTACAACAAACGTTAGATTTTCTCCTTAAAAAACACCTTATCCGCAGCCAAAGTGGTAATCGGGTAATGAAGTACGAA CATCGTTTTTGCAATTCTGAATTTGGCGACCTGAAATTTTCACCCGCCGAGGTCGCGGTGATTACCCTGCTATTATTACG TGGCGCACAAACACCGGGGGAGCTACGCACCCGAACTAACCGGATGTATGAATTTGCTGATGTTGCAGAAACCGAAGAAA CCTTGAAGACGCTCTCTCTACGTGAAGACGGGCCATTTGTGGTGCGTTTGGCACGGGAACCGGGTAAACGCGAAAGTCGC TTTATGCCTCTGTTTAGTGGGGACGTTGCTTCGTCATTATTGGCAGCGGGAGAGGCTGAAGAGAATAACCACACCCTTGA AGCCAACCCCCGTGAAACGCATTCCTTTGAAAATATAGCCCTTGAAAAAACAGCCCTTGAAGCTAGGGTTGCCCAGCTTG AACAGCAGGTTATCCAGTTGTCACGCCGTTTGGACGACGTGTTGATTCAACTGGACGATATGAAAAAACTACGCGTGGGT ATCGTGGGGCTGGGGGGCATTGCGCAAAAGGCTTATTTGCCTATTTTAACTCAGGCGCAGGGTTGGCAACTGGTTGGCGC ATTTTCACCCAATCAAGCTAAAGCTCAACCGCTATGTGATAGCTATCGTATGCGTTATTTTTCACGCTTGGATACGCTCG CTGCGGCAAGTGATGCCGTTTTTGTCCATAGTAGTACCGCCAGCCATTTTCAGGTCGTGCATGATTTATTGCAGGCCGGA GTCCATGTCTATGTGGATAAACCCCTGGCTGAAACACGAGAGCAATCAGAGCAATTGATCGAACTGGCAGATAAACAGCA TTTAGCGCTGATGGTGGGTTTTAATCGCCGTTTTGCCCCGTTATATCAGCAGTTGAAACAACAGGCGAGCAGCCCGGTCT CACTGCGGATGGAGAAGCACCGGCTAAGTAGCATCGGGCCACACGACTTAGGTTTTACCTTGCTCGATGACTATCTGCAT GTCGTGGATACGGCGCTGTGGCTAGGCGGTGAGGGGGCAAGATTGACGGGTGGGGCAGTTCAGACCAATGCTCAGGGGCA GATGCTGTATGCGGAGCACCATTTCCAGCAAGGTGGTTGTTTGATCACCACCAGTATGCACCGTCAGGCCGGAACTCAGC GGGAAAGCGTACAAGTTATCAGTGACGGTGCCTGTTATCACATTACCGATATGCGCCAATGGCAGCAGGCGTCAGCGGGG CAGGTGATAAGCCAACCTGCTCCCGGCTGGCAAACGACATTGGAACAACGTGGTTTTACCGGGGCTGTGCATCATTTCAT TGAGGCGGTCAGTAATCAAACGAGGCCGCAAGTCTCAGGTGAAGATGCGATTGTTGCACAACGTATGATTGAGCGTATTT TGCAGCAGTAG
Upstream 100 bases:
>100_bases GGCTATGCGAAAGATTATTTAATGATTGATGGGCAGTGGCGCGATCATGTGCTGACGGCCTTAACTAACAAAGAGTGGGC GTCTACTCGCTGAGGTTAGA
Downstream 100 bases:
>100_bases ATGATGTTTACAGTAATAGACGATGAGATCATCGGTTGGCATGACATCACATCAAGATCACGTGGTGAGAGTGAAAATCG ATTGGCTTCAGTAATTGGTT
Product: virulence factor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
>536_residues MKHNLNAHEARVIGCLLEKQVTTPEQYPMSLNGLTLACNQKTSRDPVMELSESQVQQTLDFLLKKHLIRSQSGNRVMKYE HRFCNSEFGDLKFSPAEVAVITLLLLRGAQTPGELRTRTNRMYEFADVAETEETLKTLSLREDGPFVVRLAREPGKRESR FMPLFSGDVASSLLAAGEAEENNHTLEANPRETHSFENIALEKTALEARVAQLEQQVIQLSRRLDDVLIQLDDMKKLRVG IVGLGGIAQKAYLPILTQAQGWQLVGAFSPNQAKAQPLCDSYRMRYFSRLDTLAAASDAVFVHSSTASHFQVVHDLLQAG VHVYVDKPLAETREQSEQLIELADKQHLALMVGFNRRFAPLYQQLKQQASSPVSLRMEKHRLSSIGPHDLGFTLLDDYLH VVDTALWLGGEGARLTGGAVQTNAQGQMLYAEHHFQQGGCLITTSMHRQAGTQRESVQVISDGACYHITDMRQWQQASAG QVISQPAPGWQTTLEQRGFTGAVHHFIEAVSNQTRPQVSGEDAIVAQRMIERILQQ
Sequences:
>Translated_536_residues MKHNLNAHEARVIGCLLEKQVTTPEQYPMSLNGLTLACNQKTSRDPVMELSESQVQQTLDFLLKKHLIRSQSGNRVMKYE HRFCNSEFGDLKFSPAEVAVITLLLLRGAQTPGELRTRTNRMYEFADVAETEETLKTLSLREDGPFVVRLAREPGKRESR FMPLFSGDVASSLLAAGEAEENNHTLEANPRETHSFENIALEKTALEARVAQLEQQVIQLSRRLDDVLIQLDDMKKLRVG IVGLGGIAQKAYLPILTQAQGWQLVGAFSPNQAKAQPLCDSYRMRYFSRLDTLAAASDAVFVHSSTASHFQVVHDLLQAG VHVYVDKPLAETREQSEQLIELADKQHLALMVGFNRRFAPLYQQLKQQASSPVSLRMEKHRLSSIGPHDLGFTLLDDYLH VVDTALWLGGEGARLTGGAVQTNAQGQMLYAEHHFQQGGCLITTSMHRQAGTQRESVQVISDGACYHITDMRQWQQASAG QVISQPAPGWQTTLEQRGFTGAVHHFIEAVSNQTRPQVSGEDAIVAQRMIERILQQ >Mature_536_residues MKHNLNAHEARVIGCLLEKQVTTPEQYPMSLNGLTLACNQKTSRDPVMELSESQVQQTLDFLLKKHLIRSQSGNRVMKYE HRFCNSEFGDLKFSPAEVAVITLLLLRGAQTPGELRTRTNRMYEFADVAETEETLKTLSLREDGPFVVRLAREPGKRESR FMPLFSGDVASSLLAAGEAEENNHTLEANPRETHSFENIALEKTALEARVAQLEQQVIQLSRRLDDVLIQLDDMKKLRVG IVGLGGIAQKAYLPILTQAQGWQLVGAFSPNQAKAQPLCDSYRMRYFSRLDTLAAASDAVFVHSSTASHFQVVHDLLQAG VHVYVDKPLAETREQSEQLIELADKQHLALMVGFNRRFAPLYQQLKQQASSPVSLRMEKHRLSSIGPHDLGFTLLDDYLH VVDTALWLGGEGARLTGGAVQTNAQGQMLYAEHHFQQGGCLITTSMHRQAGTQRESVQVISDGACYHITDMRQWQQASAG QVISQPAPGWQTTLEQRGFTGAVHHFIEAVSNQTRPQVSGEDAIVAQRMIERILQQ
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0502 family [H]
Homologues:
Organism=Escherichia coli, GI1787307, Length=302, Percent_Identity=62.2516556291391, Blast_Score=404, Evalue=1e-114, Organism=Escherichia coli, GI1787306, Length=235, Percent_Identity=60.8510638297872, Blast_Score=272, Evalue=4e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007432 - InterPro: IPR011991 [H]
Pfam domain/function: PF04337 DUF480 [H]
EC number: NA
Molecular weight: Translated: 59855; Mature: 59855
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHNLNAHEARVIGCLLEKQVTTPEQYPMSLNGLTLACNQKTSRDPVMELSESQVQQTLD CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH FLLKKHLIRSQSGNRVMKYEHRFCNSEFGDLKFSPAEVAVITLLLLRGAQTPGELRTRTN HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH RMYEFADVAETEETLKTLSLREDGPFVVRLAREPGKRESRFMPLFSGDVASSLLAAGEAE HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEECCHHHHHHHHCCCCC ENNHTLEANPRETHSFENIALEKTALEARVAQLEQQVIQLSRRLDDVLIQLDDMKKLRVG CCCCEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHE IVGLGGIAQKAYLPILTQAQGWQLVGAFSPNQAKAQPLCDSYRMRYFSRLDTLAAASDAV EEECCCHHHHHHCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE FVHSSTASHFQVVHDLLQAGVHVYVDKPLAETREQSEQLIELADKQHLALMVGFNRRFAP EEECCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH LYQQLKQQASSPVSLRMEKHRLSSIGPHDLGFTLLDDYLHVVDTALWLGGEGARLTGGAV HHHHHHHHCCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCE QTNAQGQMLYAEHHFQQGGCLITTSMHRQAGTQRESVQVISDGACYHITDMRQWQQASAG EECCCCCEEEEECCCCCCCEEEEECHHHHCCCCHHHHEEEECCCEEEEHHHHHHHHHHCC QVISQPAPGWQTTLEQRGFTGAVHHFIEAVSNQTRPQVSGEDAIVAQRMIERILQQ CHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKHNLNAHEARVIGCLLEKQVTTPEQYPMSLNGLTLACNQKTSRDPVMELSESQVQQTLD CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH FLLKKHLIRSQSGNRVMKYEHRFCNSEFGDLKFSPAEVAVITLLLLRGAQTPGELRTRTN HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH RMYEFADVAETEETLKTLSLREDGPFVVRLAREPGKRESRFMPLFSGDVASSLLAAGEAE HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEECCHHHHHHHHCCCCC ENNHTLEANPRETHSFENIALEKTALEARVAQLEQQVIQLSRRLDDVLIQLDDMKKLRVG CCCCEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHE IVGLGGIAQKAYLPILTQAQGWQLVGAFSPNQAKAQPLCDSYRMRYFSRLDTLAAASDAV EEECCCHHHHHHCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE FVHSSTASHFQVVHDLLQAGVHVYVDKPLAETREQSEQLIELADKQHLALMVGFNRRFAP EEECCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH LYQQLKQQASSPVSLRMEKHRLSSIGPHDLGFTLLDDYLHVVDTALWLGGEGARLTGGAV HHHHHHHHCCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCE QTNAQGQMLYAEHHFQQGGCLITTSMHRQAGTQRESVQVISDGACYHITDMRQWQQASAG EECCCCCEEEEECCCCCCCEEEEECHHHHCCCCHHHHEEEECCCEEEEHHHHHHHHHHCC QVISQPAPGWQTTLEQRGFTGAVHHFIEAVSNQTRPQVSGEDAIVAQRMIERILQQ CHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA