| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126142
Identifier: 22126142
GI number: 22126142
Start: 2485532
End: 2486074
Strand: Direct
Name: 22126142
Synonym: y2257
Alternate gene names: NA
Gene position: 2485532-2486074 (Clockwise)
Preceding gene: 22126137
Following gene: 22126145
Centisome position: 54.02
GC content: 50.64
Gene sequence:
>543_bases GTGTTTTGTGTTGGCCCATTTACTATGACCTGCCATAAGAATCTCCAAAATAGCCTAATGATACCCTTCACACCTGACGT GACAGCGTTGGGTCTAGACGGAATAAAGAACATACTCTTCAATCGCTTGTTGATTACTCCAGGACTTGGTCAATACGGCA GCCTCTGCCGCATCCAACCACTGGTAGGCGAGATGCTCAGTAATCACGATATCCCGCTCCTCCGGCAACGCCAAACAGAA CCAATGTTCTTTGTTACGCGTAATTCCCGGAGCATAGCGACGGCGCAAATGCGCAAAGAGTTCAAACTCCACACAGCGCT GACAGTCGAGCAACACCAGATTTTCACCCAGAATGTCAATGCCGACTTCTTCCTTTACTTCGCGCTGTGCGGTTTGCAAC GGAGCCTCCCCCTCTTCCAGACTGCCGGTCACCGACTGCCAAAAATCAGGATCATCGCGCCGTTGCAACATCAACACTCG CCCGCTGGATTTGGCATAGATGACGACCAGAACCGACTCGGGGCGTTTATAATTCATTACTGA
Upstream 100 bases:
>100_bases TAGCACCGGGGTCACCACCGCCCAGACGGGCTGCAGTGACGAGTTCACGAATGATTTTAGTGAAAATCTTACCGCGTTTG GCATCCTGTGCCGCTTTGCG
Downstream 100 bases:
>100_bases TTCTCTTCTGCCCCAGCATCTGTAGTGCCTTTCTTCGCCACCACGCTAATGGACAACTCTTGCAACGAGGCCGGGTTGGC AAAACTTGGCGCATCGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MFCVGPFTMTCHKNLQNSLMIPFTPDVTALGLDGIKNILFNRLLITPGLGQYGSLCRIQPLVGEMLSNHDIPLLRQRQTE PMFFVTRNSRSIATAQMRKEFKLHTALTVEQHQIFTQNVNADFFLYFALCGLQRSLPLFQTAGHRLPKIRIIAPLQHQHS PAGFGIDDDQNRLGAFIIHY
Sequences:
>Translated_180_residues MFCVGPFTMTCHKNLQNSLMIPFTPDVTALGLDGIKNILFNRLLITPGLGQYGSLCRIQPLVGEMLSNHDIPLLRQRQTE PMFFVTRNSRSIATAQMRKEFKLHTALTVEQHQIFTQNVNADFFLYFALCGLQRSLPLFQTAGHRLPKIRIIAPLQHQHS PAGFGIDDDQNRLGAFIIHY >Mature_180_residues MFCVGPFTMTCHKNLQNSLMIPFTPDVTALGLDGIKNILFNRLLITPGLGQYGSLCRIQPLVGEMLSNHDIPLLRQRQTE PMFFVTRNSRSIATAQMRKEFKLHTALTVEQHQIFTQNVNADFFLYFALCGLQRSLPLFQTAGHRLPKIRIIAPLQHQHS PAGFGIDDDQNRLGAFIIHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20435; Mature: 20435
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCVGPFTMTCHKNLQNSLMIPFTPDVTALGLDGIKNILFNRLLITPGLGQYGSLCRIQP CEEECCEEHHHHHCCCCCEEEEECCCCCEECHHHHHHHHHHHHHCCCCCCCCCCEEEEHH LVGEMLSNHDIPLLRQRQTEPMFFVTRNSRSIATAQMRKEFKLHTALTVEQHQIFTQNVN HHHHHHCCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEEEHHHHHEECCCC ADFFLYFALCGLQRSLPLFQTAGHRLPKIRIIAPLQHQHSPAGFGIDDDQNRLGAFIIHY CHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MFCVGPFTMTCHKNLQNSLMIPFTPDVTALGLDGIKNILFNRLLITPGLGQYGSLCRIQP CEEECCEEHHHHHCCCCCEEEEECCCCCEECHHHHHHHHHHHHHCCCCCCCCCCEEEEHH LVGEMLSNHDIPLLRQRQTEPMFFVTRNSRSIATAQMRKEFKLHTALTVEQHQIFTQNVN HHHHHHCCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEEEHHHHHEECCCC ADFFLYFALCGLQRSLPLFQTAGHRLPKIRIIAPLQHQHSPAGFGIDDDQNRLGAFIIHY CHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA