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The map label for this gene is ybcS [C]

Identifier: 22126102

GI number: 22126102

Start: 2447665

End: 2447820

Strand: Reverse

Name: ybcS [C]

Synonym: y2216

Alternate gene names: 22126102

Gene position: 2447820-2447665 (Counterclockwise)

Preceding gene: 22126103

Following gene: 22126101

Centisome position: 53.2

GC content: 51.28

Gene sequence:

>156_bases
TTGATGCAGAAATCCACAATGTTCAAGTATTTTCGCGCTGGTAACGTGACAGCGGCCTGTGAACAGTTCCCGCGCTGGAT
ATATGGTGGCGGTAAAAAATTGCCGGGGCTGGTGACTCGTCGCGAGAAGGAGAAGGCGCTATGCCTGGAAAGTTAA

Upstream 100 bases:

>100_bases
TGATGCTGAACGCTGCGTCATTCGCTATGCAAATGGCAATAAATTACCGCCCAGCGCTTTTGATGCCGCTACGTCAATCA
GCTTTAACGCCGGTTGCTCA

Downstream 100 bases:

>100_bases
CTACTGCCCTCATTGCTGTAATTGCCGCCCTGCTTGTTGGTGTGACTTATTATCAGAACGAGGCGGCAAAACTTCAGCGT
GATGTAGTAGAAATAGCATC

Product: hypothetical protein

Products: Hydrolysed Peptidoglycan; Chitodextrin [C]

Alternate protein names: Glycoside Hydrolase Family Protein; Lysozyme

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MMQKSTMFKYFRAGNVTAACEQFPRWIYGGGKKLPGLVTRREKEKALCLES

Sequences:

>Translated_51_residues
MMQKSTMFKYFRAGNVTAACEQFPRWIYGGGKKLPGLVTRREKEKALCLES
>Mature_51_residues
MMQKSTMFKYFRAGNVTAACEQFPRWIYGGGKKLPGLVTRREKEKALCLES

Specific function: Essential For Lysis Of Bacterial Cell Wall, By Showing Cell Wall Hydrolyzing Activity (By Similarity). [C]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.17 [C]

Molecular weight: Translated: 5858; Mature: 5858

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQKSTMFKYFRAGNVTAACEQFPRWIYGGGKKLPGLVTRREKEKALCLES
CCCCHHHHHHHHCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMQKSTMFKYFRAGNVTAACEQFPRWIYGGGKKLPGLVTRREKEKALCLES
CCCCHHHHHHHHCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Peptidoglycan (N-acetylmuraminic acid and N-acetyl-D-glucosamine Residues); Chitodextrin (N-acetyl-D-glucosamine residues) [C]

Specific reaction: Hydrolysis of beta-linkage between N-acetylmuraminic acid and N-acetyl- D-glucosamine residues in peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrin [C]

General reaction: O-Glycosyl bond hydrolysis; glycosyltransfer to saccharides other alcohols and H2O [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA