| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126100
Identifier: 22126100
GI number: 22126100
Start: 2445963
End: 2446760
Strand: Reverse
Name: 22126100
Synonym: y2214
Alternate gene names: NA
Gene position: 2446760-2445963 (Counterclockwise)
Preceding gene: 22126101
Following gene: 22126099
Centisome position: 53.18
GC content: 48.12
Gene sequence:
>798_bases TTGAGGAACCGGCTGGCTGTCGGATGCCTTCTGAGGGCCGTATTCCTGTGCGAACAAGGTTCATCACTAAAAGGTATATC CGATATGAAAAGTATGATCGCAATTGAGCAGGAAGCATCCATGACTAGCTTGGACTTTCTGAGGAATATAATTAACCCAG CCCGAATTGAATACGGGGAACCTGAAGTGGAAAATCGCCACTTTCTTTCTCGTATTGAAGATGAAATTGACGACTTAGGG GTCGCGGAAAACTTTTACGTGACCACCGGGCAAGGTGCCAGCCGAGCGGTTAAGGGCTACATGCTCAATATGGAGCAGAT GACGCTTATCGGTATGCGTGAATCCAAAGCAGTTCGCCGTTCTGTGCTGGCAAAGCTCAAGGTAATGCATTGCCCAGTCA TCCCCCAAAGCTTACCAGAAGCACTTCGACTTGCTGCTGACTTGGCAGAGCATAATGCCAAATTGAAAAATGAGTTGGCT GTCGCTGCTCCAAAGGCTGATTTCGTTGATAACTACGTCAATGCATCCGGTTCATTTGGCTTCCGTGAGGCTTGCAAACT ACTGAAGGCGAAAGAACCAGAGTTCAGGGCTTTCTTGATTGCTTCTAATGTTATGTACGTTCTTGGTGGGAAAATGACGC CTCGCGCTCCGCATATTGATGCAGGCCGATTCACTGTAAAGACAGGTGAGAACCTTAACAACGGGCATGCATTTACCCAG GCTAAATTCACACCGAAGGGTATTCAGTGGATCGCTGGACTGTGGGCATCGTGGCAGTTGAATAATCAGGCAGCATGA
Upstream 100 bases:
>100_bases CAAAGAACATGAAGGCTCAGTTTAACGACTGGGCCTTTTTTATTGGCAGTAAATCCAGCGCATCGCAGCGCAAATCACTC AGAACCTTTCAGGATGACCC
Downstream 100 bases:
>100_bases CCGGCTCAAAAATGAGCCCGTTGATAATAGTTGATAATAAAGACAAATTGAGAGCTACTTTCACAACAGCTCTCAATCAA CTAAAAGCATTCTGCTATTA
Product: phage antirepressor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRNRLAVGCLLRAVFLCEQGSSLKGISDMKSMIAIEQEASMTSLDFLRNIINPARIEYGEPEVENRHFLSRIEDEIDDLG VAENFYVTTGQGASRAVKGYMLNMEQMTLIGMRESKAVRRSVLAKLKVMHCPVIPQSLPEALRLAADLAEHNAKLKNELA VAAPKADFVDNYVNASGSFGFREACKLLKAKEPEFRAFLIASNVMYVLGGKMTPRAPHIDAGRFTVKTGENLNNGHAFTQ AKFTPKGIQWIAGLWASWQLNNQAA
Sequences:
>Translated_265_residues MRNRLAVGCLLRAVFLCEQGSSLKGISDMKSMIAIEQEASMTSLDFLRNIINPARIEYGEPEVENRHFLSRIEDEIDDLG VAENFYVTTGQGASRAVKGYMLNMEQMTLIGMRESKAVRRSVLAKLKVMHCPVIPQSLPEALRLAADLAEHNAKLKNELA VAAPKADFVDNYVNASGSFGFREACKLLKAKEPEFRAFLIASNVMYVLGGKMTPRAPHIDAGRFTVKTGENLNNGHAFTQ AKFTPKGIQWIAGLWASWQLNNQAA >Mature_265_residues MRNRLAVGCLLRAVFLCEQGSSLKGISDMKSMIAIEQEASMTSLDFLRNIINPARIEYGEPEVENRHFLSRIEDEIDDLG VAENFYVTTGQGASRAVKGYMLNMEQMTLIGMRESKAVRRSVLAKLKVMHCPVIPQSLPEALRLAADLAEHNAKLKNELA VAAPKADFVDNYVNASGSFGFREACKLLKAKEPEFRAFLIASNVMYVLGGKMTPRAPHIDAGRFTVKTGENLNNGHAFTQ AKFTPKGIQWIAGLWASWQLNNQAA
Specific function: Unknown
COG id: COG3645
COG function: function code S; Uncharacterized phage-encoded protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29319; Mature: 29319
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNRLAVGCLLRAVFLCEQGSSLKGISDMKSMIAIEQEASMTSLDFLRNIINPARIEYGE CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCC PEVENRHFLSRIEDEIDDLGVAENFYVTTGQGASRAVKGYMLNMEQMTLIGMRESKAVRR CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCHHHHHEECCHHHHHHHH SVLAKLKVMHCPVIPQSLPEALRLAADLAEHNAKLKNELAVAAPKADFVDNYVNASGSFG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCC FREACKLLKAKEPEFRAFLIASNVMYVLGGKMTPRAPHIDAGRFTVKTGENLNNGHAFTQ HHHHHHHHHCCCCCCEEEEEHHCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEE AKFTPKGIQWIAGLWASWQLNNQAA ECCCHHHHHHHHHHHHHEECCCCCC >Mature Secondary Structure MRNRLAVGCLLRAVFLCEQGSSLKGISDMKSMIAIEQEASMTSLDFLRNIINPARIEYGE CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCC PEVENRHFLSRIEDEIDDLGVAENFYVTTGQGASRAVKGYMLNMEQMTLIGMRESKAVRR CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCHHHHHEECCHHHHHHHH SVLAKLKVMHCPVIPQSLPEALRLAADLAEHNAKLKNELAVAAPKADFVDNYVNASGSFG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCC FREACKLLKAKEPEFRAFLIASNVMYVLGGKMTPRAPHIDAGRFTVKTGENLNNGHAFTQ HHHHHHHHHCCCCCCEEEEEHHCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEE AKFTPKGIQWIAGLWASWQLNNQAA ECCCHHHHHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA