| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126099
Identifier: 22126099
GI number: 22126099
Start: 2444871
End: 2445506
Strand: Reverse
Name: 22126099
Synonym: y2213
Alternate gene names: NA
Gene position: 2445506-2444871 (Counterclockwise)
Preceding gene: 22126100
Following gene: 22126098
Centisome position: 53.15
GC content: 47.96
Gene sequence:
>636_bases ATGGCTAATTCAGATACACAAATGAAGCGGCCATACCCGCCATTATCGTTCGTTAATGAATTCAGACCTCACATTGAATT GGTTCCCGCCACTGAAGTGCTTGAGTGGGTTAACAGTCAAATACTCAGTGACGATGGCGAGTTGCACAATCCCGACCACG GACACTTAATTGACGCTGACATAAAAATCATGTGGGCATCATCTGCGTTTGAAAAGCAGGGTAGAACTGTTCTTGGTCAA GCCGAGCAGGTAGCAATGAGAGCCGGTGGCTGGCAAAAGGCCCGAATGGAACAGCAGATGTATGAATGGTTTGGTGATGT ACCGACATTCATAATCACCCTGGCTGCTGATTATTGCGCTCAATGCTCTGATCTTGAGTTCTGCGCACTGATAGAACATG AGCTTTATCACATCAGCCATGCTACCGACGAATTCGGCGCACCCAAGTTCAACAAAGAAGGGCAGCCGGTATTGAAGCTG CGTGGACATGATATTGAGGAATTCGTGGGTGTGGTTCGCAGATACGGTGCAAGCGTTGAAGTACAGGAAATGATTGATGC GGCAAACAAACCTGCGGAGGTAGCCCATCTTAACGTAGCCAGGGCGTGTGGAACATGCCTATTAAAACTGGCTTAA
Upstream 100 bases:
>100_bases CTTATAAAGTGCCTTTGACAGAATCTTATAGATGTTTTCACATATCGAAGTCTCAGCCAATTAGCGGCTGAGACTTTATC AACCAGCGGAATATTCTGTT
Downstream 100 bases:
>100_bases CTTTGGATTGCTTTGGATGAATGGTGATTTATGGCTGCCTTAAAACCGGATGTGAAAGCCTTCATCATTCAAGCATTGGC GTGCTTCGATACCTTGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MANSDTQMKRPYPPLSFVNEFRPHIELVPATEVLEWVNSQILSDDGELHNPDHGHLIDADIKIMWASSAFEKQGRTVLGQ AEQVAMRAGGWQKARMEQQMYEWFGDVPTFIITLAADYCAQCSDLEFCALIEHELYHISHATDEFGAPKFNKEGQPVLKL RGHDIEEFVGVVRRYGASVEVQEMIDAANKPAEVAHLNVARACGTCLLKLA
Sequences:
>Translated_211_residues MANSDTQMKRPYPPLSFVNEFRPHIELVPATEVLEWVNSQILSDDGELHNPDHGHLIDADIKIMWASSAFEKQGRTVLGQ AEQVAMRAGGWQKARMEQQMYEWFGDVPTFIITLAADYCAQCSDLEFCALIEHELYHISHATDEFGAPKFNKEGQPVLKL RGHDIEEFVGVVRRYGASVEVQEMIDAANKPAEVAHLNVARACGTCLLKLA >Mature_210_residues ANSDTQMKRPYPPLSFVNEFRPHIELVPATEVLEWVNSQILSDDGELHNPDHGHLIDADIKIMWASSAFEKQGRTVLGQA EQVAMRAGGWQKARMEQQMYEWFGDVPTFIITLAADYCAQCSDLEFCALIEHELYHISHATDEFGAPKFNKEGQPVLKLR GHDIEEFVGVVRRYGASVEVQEMIDAANKPAEVAHLNVARACGTCLLKLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23668; Mature: 23537
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSDTQMKRPYPPLSFVNEFRPHIELVPATEVLEWVNSQILSDDGELHNPDHGHLIDAD CCCCCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC IKIMWASSAFEKQGRTVLGQAEQVAMRAGGWQKARMEQQMYEWFGDVPTFIITLAADYCA EEEEECCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QCSDLEFCALIEHELYHISHATDEFGAPKFNKEGQPVLKLRGHDIEEFVGVVRRYGASVE CCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCC VQEMIDAANKPAEVAHLNVARACGTCLLKLA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ANSDTQMKRPYPPLSFVNEFRPHIELVPATEVLEWVNSQILSDDGELHNPDHGHLIDAD CCCCCCCCCCCCCHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC IKIMWASSAFEKQGRTVLGQAEQVAMRAGGWQKARMEQQMYEWFGDVPTFIITLAADYCA EEEEECCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QCSDLEFCALIEHELYHISHATDEFGAPKFNKEGQPVLKLRGHDIEEFVGVVRRYGASVE CCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCC VQEMIDAANKPAEVAHLNVARACGTCLLKLA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA