| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126087
Identifier: 22126087
GI number: 22126087
Start: 2434830
End: 2435237
Strand: Reverse
Name: 22126087
Synonym: y2200
Alternate gene names: NA
Gene position: 2435237-2434830 (Counterclockwise)
Preceding gene: 22126088
Following gene: 22126086
Centisome position: 52.93
GC content: 44.36
Gene sequence:
>408_bases GTGAGTACTCAGCGAATCACTGCATTGTTGGAAAAACGGCTGGGAGAATGGGCTGCAATTAAAGGTATTCCGTTGGCTGC TGAGAACGTTAGCTTTGATGATACTGGTACTATGTATCTGCAATCACACGTAATGCCAGCCACAACAGACGCTATTGATT TAGCGCAAGTTTCCCGCGTATTCAGAGGCGTGTATCAGATTAATATCAACGTTAAGGCAGGGGGTGGAAAGTCGAAATCT CATATTATTGCTGCTGAATTGATAGAGTTGTTCAACCTCAATACTGAGCTTACAGACGGAGTGGTAACCTGCTACATAAA CAGCGTACCTAGCCAGTTCCCAAGCATAACCAACGGCATTTCATACACAACACCGATCAGTATGAGTTATCGCGCTGACG TTATCTAA
Upstream 100 bases:
>100_bases TTGAATTTGGTCATTCATCACAAGCCCCAAGCGGGATGATCCGCATAACCGCCGAGGACGCTGTTAAATACTTTACTGAA GCAGCTAATGAGGTGAATAA
Downstream 100 bases:
>100_bases ACATCAATCAATCCAACACCACCGGCCTATGCCGGTTTTTTTATATCCAAAATCGGAGAATTACTATGGGCTTTGCACTT CCAAACGGGGCAGGTATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSTQRITALLEKRLGEWAAIKGIPLAAENVSFDDTGTMYLQSHVMPATTDAIDLAQVSRVFRGVYQININVKAGGGKSKS HIIAAELIELFNLNTELTDGVVTCYINSVPSQFPSITNGISYTTPISMSYRADVI
Sequences:
>Translated_135_residues MSTQRITALLEKRLGEWAAIKGIPLAAENVSFDDTGTMYLQSHVMPATTDAIDLAQVSRVFRGVYQININVKAGGGKSKS HIIAAELIELFNLNTELTDGVVTCYINSVPSQFPSITNGISYTTPISMSYRADVI >Mature_134_residues STQRITALLEKRLGEWAAIKGIPLAAENVSFDDTGTMYLQSHVMPATTDAIDLAQVSRVFRGVYQININVKAGGGKSKSH IIAAELIELFNLNTELTDGVVTCYINSVPSQFPSITNGISYTTPISMSYRADVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14655; Mature: 14524
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQRITALLEKRLGEWAAIKGIPLAAENVSFDDTGTMYLQSHVMPATTDAIDLAQVSRV CCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH FRGVYQININVKAGGGKSKSHIIAAELIELFNLNTELTDGVVTCYINSVPSQFPSITNGI HHCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHCCC SYTTPISMSYRADVI CCCCCCCCCEEECCC >Mature Secondary Structure STQRITALLEKRLGEWAAIKGIPLAAENVSFDDTGTMYLQSHVMPATTDAIDLAQVSRV CHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHH FRGVYQININVKAGGGKSKSHIIAAELIELFNLNTELTDGVVTCYINSVPSQFPSITNGI HHCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHCCC SYTTPISMSYRADVI CCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA