| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126073
Identifier: 22126073
GI number: 22126073
Start: 2417559
End: 2418476
Strand: Reverse
Name: 22126073
Synonym: y2186
Alternate gene names: NA
Gene position: 2418476-2417559 (Counterclockwise)
Preceding gene: 22126074
Following gene: 22126072
Centisome position: 52.57
GC content: 44.34
Gene sequence:
>918_bases ATGGCTTGGTACCGGTCAGGCACAGTCACGTCAGAAGCAGCACAAAATATAGTCACAGGAACAGGAACGCAGTGGGCCAA TAATGTGATGGGCGTAGCGCCCGGCATGGCTTTATTTATCCCTGATTCTGCTGGAAATACTTTGATTTATGAAATATTAG CAGTAGATAGCAATACTCAAATTCGCATAAATGGCAATATAAAAGAATCCGTGGCCGATTCCTCTTATGCAATTATGACT ACTGTATCTAATTCATATTCAGCGCTAGCGCGTGAGACATCAGCACAATTAGCGATGTATCAGCAACTACTGAAAAACTG GCAACAAATAACAACGGGTACCGGCGATGTGAATATTATCGCTCCTGACGGTTCGGTTGTCATAATTCCATCTCTTAATA GTTTAATGCCAAAATCCGGCGGCGCATTCACTGGCCCGGTATCAATGTTTCACGATGCAACGGATCCGTTAGAGCCAGTT ACATTTCAACAGTTTAAACAAACTGGAGGGGAATTAGCAACGCAGATGACACAACTTGCATCGCGCACTACGACTTTAGA AGCAGATGCGTTCACTGCTAGTAGGATAGCAAATACGCCATGGATCCCGTTGACACTTCAAAACGGCTGGTTACCACTTC AGGGTTATCACAATGCAATCTATCGAAAAATAAATGGAGTTGTATACATGGAGGGGGTAATTACTGGCGGAACTCACGCT GACGGTACTGTTATCGCAATTCTTCCCGATGGTTATAGACCCGCTTTAGATCAAGTTAGCGTCCAGCCAATTTCAGGTAG CACGCTCGGTGGCATTACAGCGCAATCGAGAATTGCATTGTGGACGGATGGGGCGTTAAGAATTTACGGAATAACTGGGA ATGGTGACATCGGAATAAAATCATCTTGGGTTATTTGA
Upstream 100 bases:
>100_bases GTTAATAGTTCAAATACACTCGATTATCCATACGGCATTTCTCCCATCTCTATTCCTGTACTTAACGCGGACATTTATTT TTAAAATTAAGGATTAATAT
Downstream 100 bases:
>100_bases AGAGGGCATTATGAAAAAGTTAAATAAACTGGATAGCGACGGGTTCTATATTGAAGATTATATCGATGGATATTTGCCAA AGAATTGGACAGCTGATTTA
Product: phage tail protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MAWYRSGTVTSEAAQNIVTGTGTQWANNVMGVAPGMALFIPDSAGNTLIYEILAVDSNTQIRINGNIKESVADSSYAIMT TVSNSYSALARETSAQLAMYQQLLKNWQQITTGTGDVNIIAPDGSVVIIPSLNSLMPKSGGAFTGPVSMFHDATDPLEPV TFQQFKQTGGELATQMTQLASRTTTLEADAFTASRIANTPWIPLTLQNGWLPLQGYHNAIYRKINGVVYMEGVITGGTHA DGTVIAILPDGYRPALDQVSVQPISGSTLGGITAQSRIALWTDGALRIYGITGNGDIGIKSSWVI
Sequences:
>Translated_305_residues MAWYRSGTVTSEAAQNIVTGTGTQWANNVMGVAPGMALFIPDSAGNTLIYEILAVDSNTQIRINGNIKESVADSSYAIMT TVSNSYSALARETSAQLAMYQQLLKNWQQITTGTGDVNIIAPDGSVVIIPSLNSLMPKSGGAFTGPVSMFHDATDPLEPV TFQQFKQTGGELATQMTQLASRTTTLEADAFTASRIANTPWIPLTLQNGWLPLQGYHNAIYRKINGVVYMEGVITGGTHA DGTVIAILPDGYRPALDQVSVQPISGSTLGGITAQSRIALWTDGALRIYGITGNGDIGIKSSWVI >Mature_304_residues AWYRSGTVTSEAAQNIVTGTGTQWANNVMGVAPGMALFIPDSAGNTLIYEILAVDSNTQIRINGNIKESVADSSYAIMTT VSNSYSALARETSAQLAMYQQLLKNWQQITTGTGDVNIIAPDGSVVIIPSLNSLMPKSGGAFTGPVSMFHDATDPLEPVT FQQFKQTGGELATQMTQLASRTTTLEADAFTASRIANTPWIPLTLQNGWLPLQGYHNAIYRKINGVVYMEGVITGGTHAD GTVIAILPDGYRPALDQVSVQPISGSTLGGITAQSRIALWTDGALRIYGITGNGDIGIKSSWVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32392; Mature: 32261
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWYRSGTVTSEAAQNIVTGTGTQWANNVMGVAPGMALFIPDSAGNTLIYEILAVDSNTQ CCEECCCCCCHHHHHHHCCCCCCHHHCCCEECCCCEEEEEECCCCCEEEEEEEEECCCCE IRINGNIKESVADSSYAIMTTVSNSYSALARETSAQLAMYQQLLKNWQQITTGTGDVNII EEECCCHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE APDGSVVIIPSLNSLMPKSGGAFTGPVSMFHDATDPLEPVTFQQFKQTGGELATQMTQLA CCCCCEEEEECCHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SRTTTLEADAFTASRIANTPWIPLTLQNGWLPLQGYHNAIYRKINGVVYMEGVITGGTHA HHCEEEECCCHHHHHHCCCCEEEEEECCCCEECCHHHHHHHHHHCCEEEEEEEEECCCCC DGTVIAILPDGYRPALDQVSVQPISGSTLGGITAQSRIALWTDGALRIYGITGNGDIGIK CCEEEEEECCCCCCCHHCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCC SSWVI EECCC >Mature Secondary Structure AWYRSGTVTSEAAQNIVTGTGTQWANNVMGVAPGMALFIPDSAGNTLIYEILAVDSNTQ CEECCCCCCHHHHHHHCCCCCCHHHCCCEECCCCEEEEEECCCCCEEEEEEEEECCCCE IRINGNIKESVADSSYAIMTTVSNSYSALARETSAQLAMYQQLLKNWQQITTGTGDVNII EEECCCHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE APDGSVVIIPSLNSLMPKSGGAFTGPVSMFHDATDPLEPVTFQQFKQTGGELATQMTQLA CCCCCEEEEECCHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SRTTTLEADAFTASRIANTPWIPLTLQNGWLPLQGYHNAIYRKINGVVYMEGVITGGTHA HHCEEEECCCHHHHHHCCCCEEEEEECCCCEECCHHHHHHHHHHCCEEEEEEEEECCCCC DGTVIAILPDGYRPALDQVSVQPISGSTLGGITAQSRIALWTDGALRIYGITGNGDIGIK CCEEEEEECCCCCCCHHCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCC SSWVI EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA