| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is tfaD [C]
Identifier: 22126072
GI number: 22126072
Start: 2417129
End: 2417548
Strand: Reverse
Name: tfaD [C]
Synonym: y2185
Alternate gene names: 22126072
Gene position: 2417548-2417129 (Counterclockwise)
Preceding gene: 22126073
Following gene: 22126067
Centisome position: 52.55
GC content: 41.43
Gene sequence:
>420_bases ATGAAAAAGTTAAATAAACTGGATAGCGACGGGTTCTATATTGAAGATTATATCGATGGATATTTGCCAAAGAATTGGAC AGCTGATTTAGTTGGGGATGGCTATTACAAAGCGCAATATCAAAACGCGGATATAGACCCGGATACAGGGGAATGGACTG GTGGCGTGTGGGCAGAAACTAGCGGGCCTTCAACTATAGATATTTCAGCTCAAAAAGCGGAATTTGTTACTCAAGCGAAA CTCAAAAAATCAAAGCTGATAAGTGATGCAAGCGATAGAATAGAGATTCTAAAAGACAGAATTGAGTTGGGGCAAGATAG AGCAGCAGAGCTGAAATTATGGAAGTCATATCGTATAGCGCTTGATGATATTGATGTAAGTGCGGCACCGGATATCGAGT GGCCACTAAAGCCTGAGTGA
Upstream 100 bases:
>100_bases AGAATTGCATTGTGGACGGATGGGGCGTTAAGAATTTACGGAATAACTGGGAATGGTGACATCGGAATAAAATCATCTTG GGTTATTTGAAGAGGGCATT
Downstream 100 bases:
>100_bases TTTGGAATATTTGGCAGGGGCGCCGAGGTGGTACGGATTTAGGTTTTGCTGTCGTGCATTGCGGTGAATCGGGACTGGAT AGATCCGGGCAGGAGAAGGA
Product: phage tail protein
Products: NA
Alternate protein names: Tail Assembly Chaperone Gp
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKKLNKLDSDGFYIEDYIDGYLPKNWTADLVGDGYYKAQYQNADIDPDTGEWTGGVWAETSGPSTIDISAQKAEFVTQAK LKKSKLISDASDRIEILKDRIELGQDRAAELKLWKSYRIALDDIDVSAAPDIEWPLKPE
Sequences:
>Translated_139_residues MKKLNKLDSDGFYIEDYIDGYLPKNWTADLVGDGYYKAQYQNADIDPDTGEWTGGVWAETSGPSTIDISAQKAEFVTQAK LKKSKLISDASDRIEILKDRIELGQDRAAELKLWKSYRIALDDIDVSAAPDIEWPLKPE >Mature_139_residues MKKLNKLDSDGFYIEDYIDGYLPKNWTADLVGDGYYKAQYQNADIDPDTGEWTGGVWAETSGPSTIDISAQKAEFVTQAK LKKSKLISDASDRIEILKDRIELGQDRAAELKLWKSYRIALDDIDVSAAPDIEWPLKPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15676; Mature: 15676
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLNKLDSDGFYIEDYIDGYLPKNWTADLVGDGYYKAQYQNADIDPDTGEWTGGVWAET CCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC SGPSTIDISAQKAEFVTQAKLKKSKLISDASDRIEILKDRIELGQDRAAELKLWKSYRIA CCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEEEE LDDIDVSAAPDIEWPLKPE EECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKLNKLDSDGFYIEDYIDGYLPKNWTADLVGDGYYKAQYQNADIDPDTGEWTGGVWAET CCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC SGPSTIDISAQKAEFVTQAKLKKSKLISDASDRIEILKDRIELGQDRAAELKLWKSYRIA CCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEEEE LDDIDVSAAPDIEWPLKPE EECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA