| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126058
Identifier: 22126058
GI number: 22126058
Start: 2398961
End: 2400082
Strand: Direct
Name: 22126058
Synonym: y2170
Alternate gene names: NA
Gene position: 2398961-2400082 (Clockwise)
Preceding gene: 22126057
Following gene: 22126060
Centisome position: 52.14
GC content: 50.98
Gene sequence:
>1122_bases TTGATGAAATGGTATGATGGACTACGGCATCCGGGTGTATTGGCGGCATTGTCTGCTGCAATACTGTTTGGTGCCGGTAC CCCTCTGGCAAAACAATTACTGAATACCGTTAGCCCCTGGTTATTGGCCGGTTTACTTTACCTTGGCTCGGGTATTGGCT TAACACTCTACCGTTTGATCACTCGCCCGGCGGCGGTGAGCCTGCCCCGTAATGAATTATTGTGGTTTATTGGTGCCATC CTCTCCGGGGGGATCATCGCACCCGTGCTGCTAATGGTCGGCCTCACGGGTATGCCCGCCTCTGGCGCATCACTGTTACT CAATGCTGAAGGGGTATTCACCGCCCTTTTAGCCTGGTTTGCCTTCAAAGAGAATGTTGACCGTCGTATTGCTCTGGGGA TGGTGATTATCATCGCTGGCGCAGTTGTGCTTAGCTGGCCAGAAGAAGTACTTAACTGGTGGCCAAAAGAGGCTCAATTT GCCGGATTATGGCCGACGCTGGCCATTTTAGGTGCCTGCTTTGCCTGGGGAATTGATAACAATCTGACCCGTAAAGTCTC GCTGAACGATGCAACCTGGATTGCCGCCGTCAAAGGGGGCGTTGCCGGAGTGGTTAATCTGGCGCTGGCCTTCGCCCTCG GAGCAACATTGCCCCCTTTGGCAAATCTCGCTGGCGCATTGTTGGTTGGATTTTTGGCTTATGGTGTCAGTTTGGCGCTA TTTGTCATTGGATTACGTCACCTCGGTACTGCCCGCACCGGTGCCTATTTTTCTATTGCTCCGTTCTTAGGCGCAGTGTT GGCTGTCGCCTTAGGTGACACTGTCACCATTCCGTTGCTCATCGCGGGTCTTTTGATGGCGATAGGGATCGGGTTACATC TTACGGAGCAGCATGAACATCAACATACCCATGATGAAATGATACATGAGCATGAACATATTCATGACGAACATCATCAA CATCGCCATGACTTTCCGGTAGACGCGGGTACCGCGCATAAGCATCGTCATCAGCACCTACCGATGGCACACTCTCATTC GCATTTTCCTGATTCACACCATCAGCATAAACATCCTCGACATAAGCATAATCAACATAAGTATCATCAACATAAGCACT AG
Upstream 100 bases:
>100_bases AATATCAGCCGGTTAATTTTTTCTTGTTCAGAAAGCATTTTCCGGCTTTTTCTATGGGCTAAAATTATCACTTCCCGCTA TTTGTGGATCACGAGCTGAA
Downstream 100 bases:
>100_bases CGGTGCAAACGTTAGCGGTATAAACACCAAACTCTCACCGTTCATCCAATTGGCTGAAGCGCTGAACAAGATAATCCAAT ACGCTGCGTACCGAAGGTAG
Product: cobalt-nickel resistance (export) protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MMKWYDGLRHPGVLAALSAAILFGAGTPLAKQLLNTVSPWLLAGLLYLGSGIGLTLYRLITRPAAVSLPRNELLWFIGAI LSGGIIAPVLLMVGLTGMPASGASLLLNAEGVFTALLAWFAFKENVDRRIALGMVIIIAGAVVLSWPEEVLNWWPKEAQF AGLWPTLAILGACFAWGIDNNLTRKVSLNDATWIAAVKGGVAGVVNLALAFALGATLPPLANLAGALLVGFLAYGVSLAL FVIGLRHLGTARTGAYFSIAPFLGAVLAVALGDTVTIPLLIAGLLMAIGIGLHLTEQHEHQHTHDEMIHEHEHIHDEHHQ HRHDFPVDAGTAHKHRHQHLPMAHSHSHFPDSHHQHKHPRHKHNQHKYHQHKH
Sequences:
>Translated_373_residues MMKWYDGLRHPGVLAALSAAILFGAGTPLAKQLLNTVSPWLLAGLLYLGSGIGLTLYRLITRPAAVSLPRNELLWFIGAI LSGGIIAPVLLMVGLTGMPASGASLLLNAEGVFTALLAWFAFKENVDRRIALGMVIIIAGAVVLSWPEEVLNWWPKEAQF AGLWPTLAILGACFAWGIDNNLTRKVSLNDATWIAAVKGGVAGVVNLALAFALGATLPPLANLAGALLVGFLAYGVSLAL FVIGLRHLGTARTGAYFSIAPFLGAVLAVALGDTVTIPLLIAGLLMAIGIGLHLTEQHEHQHTHDEMIHEHEHIHDEHHQ HRHDFPVDAGTAHKHRHQHLPMAHSHSHFPDSHHQHKHPRHKHNQHKYHQHKH >Mature_373_residues MMKWYDGLRHPGVLAALSAAILFGAGTPLAKQLLNTVSPWLLAGLLYLGSGIGLTLYRLITRPAAVSLPRNELLWFIGAI LSGGIIAPVLLMVGLTGMPASGASLLLNAEGVFTALLAWFAFKENVDRRIALGMVIIIAGAVVLSWPEEVLNWWPKEAQF AGLWPTLAILGACFAWGIDNNLTRKVSLNDATWIAAVKGGVAGVVNLALAFALGATLPPLANLAGALLVGFLAYGVSLAL FVIGLRHLGTARTGAYFSIAPFLGAVLAVALGDTVTIPLLIAGLLMAIGIGLHLTEQHEHQHTHDEMIHEHEHIHDEHHQ HRHDFPVDAGTAHKHRHQHLPMAHSHSHFPDSHHQHKHPRHKHNQHKYHQHKH
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 40410; Mature: 40410
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKWYDGLRHPGVLAALSAAILFGAGTPLAKQLLNTVSPWLLAGLLYLGSGIGLTLYRLI CCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TRPAAVSLPRNELLWFIGAILSGGIIAPVLLMVGLTGMPASGASLLLNAEGVFTALLAWF HCCHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHH AFKENVDRRIALGMVIIIAGAVVLSWPEEVLNWWPKEAQFAGLWPTLAILGACFAWGIDN HHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC NLTRKVSLNDATWIAAVKGGVAGVVNLALAFALGATLPPLANLAGALLVGFLAYGVSLAL CCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FVIGLRHLGTARTGAYFSIAPFLGAVLAVALGDTVTIPLLIAGLLMAIGIGLHLTEQHEH HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCHHHH QHTHDEMIHEHEHIHDEHHQHRHDFPVDAGTAHKHRHQHLPMAHSHSHFPDSHHQHKHPR CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC HKHNQHKYHQHKH CCCCCHHHHCCCC >Mature Secondary Structure MMKWYDGLRHPGVLAALSAAILFGAGTPLAKQLLNTVSPWLLAGLLYLGSGIGLTLYRLI CCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TRPAAVSLPRNELLWFIGAILSGGIIAPVLLMVGLTGMPASGASLLLNAEGVFTALLAWF HCCHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHH AFKENVDRRIALGMVIIIAGAVVLSWPEEVLNWWPKEAQFAGLWPTLAILGACFAWGIDN HHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC NLTRKVSLNDATWIAAVKGGVAGVVNLALAFALGATLPPLANLAGALLVGFLAYGVSLAL CCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FVIGLRHLGTARTGAYFSIAPFLGAVLAVALGDTVTIPLLIAGLLMAIGIGLHLTEQHEH HHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCHHHH QHTHDEMIHEHEHIHDEHHQHRHDFPVDAGTAHKHRHQHLPMAHSHSHFPDSHHQHKHPR CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC HKHNQHKYHQHKH CCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]