| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is phoA [H]
Identifier: 22126018
GI number: 22126018
Start: 2352615
End: 2354090
Strand: Reverse
Name: phoA [H]
Synonym: y2130
Alternate gene names: 22126018
Gene position: 2354090-2352615 (Counterclockwise)
Preceding gene: 22126022
Following gene: 22126017
Centisome position: 51.17
GC content: 49.73
Gene sequence:
>1476_bases ATGACTGTTTTACAACAAGGAATTATATCGATGAACCGTGTACCTACTTTATCCGGCATAGCATTATCATCCGGCATAGC ATTATCGACTCTGTTACTGTCCAGTGCGCTATTAACGCCTAATGCGATTGCGGCTGCTACGGGCTTATATGACCGTGCTG CGCATGGTGATGTGACTCAATTTGGCGGCGCACGTCGTTTGACTGAAGACCAAACCCAGGCTCTGCGTGACTCGTTATCC AATAAAACAGTAAAAAATGTCATTTTGTTGATTGGAGATGGGATGGGCGATTCTGAAATCACGTCTGCCCGTAACTATGC GATGGGGGCCGGTGGTTTCTTTAAAGGCATTGATGCGCTGCCGCTGACCGGGCAATACACGCACTATGCACTCGATAAAA AAACACAAAAACCAAATTATGTGACTGATTCTGCTGCATCAGCGACGGCCTGGTCATCTGGCGTAAAAACGTATAATGGT GCGTTGGGGGTTGATGTTTTTGGTAAAGACCATGTTACGTTGCTGGAACTGGCCAAAAAAGCAGGCAAAGCGACGGGTAA TGTCTCTACCGCTGAACTACAAGATGCCACTCCTGCTGCGCAGTTTGCCCACGTGACCGGGCGTAAGTGCTATGGCCCGG AAGAAACCAGTGAGAAATGCAGTACCAATGCATTGGAAAAAGGGGGCCGTGGCTCTATTACTGAGCAAATGATTGAAGGG CGCGCTGATGTCACGCTTGGCGGTGGTGCAGCATCATTCAGCCAGGTCGCTAAAGCCGGTGAGTGGAAAGACCAGTCGTT GCGTGATCAGGCGTTGGCCCGCGGCTACGTCATTGTTGAGAACCTTGATGACCTGAACGCAATAAAACACGCTAATCAAC AGAAACCTCTATTGGGCTTATTCTCGCCAGGTAATATGCCAGTGCGTTGGCAGGGGCCAAAAGCCTCTTATCATGGCAAT CTGGATAAACCGCCAGTGGTGTGTGAAAACAATGCTGAGCGGACCAGCGACATTCCAACGTTGGCTGTCATGACAGAAAA AGCCATTGACCTGCTGAAAACCAATGAGAATGGCTTCTTCTTGCAAGTTGAAGGGGCGTCGATTGATAAACAGGATCACT CCGCTAACCCATGTGGTCAGTTTGGTGAAACGGTTGATCTGGATGAAGCGGTACAAAAAGCGCTGGAATTCGCCCGTGCT GATGGCAACACTTTGGTGATTGTGACGGCTGACCATGCTCACTCCAGCCAAATTATCGAGCCTGAAGCGAAGGCTCCGGG CCTGACTCAGGCATTAACGACCAAAGATGGCGCGGTCATGGCGATCAGCTACGGTAACTCTGAAGACGATTCTCAAGGCC ATACTGGGTCACAATTGCGGATAGCGGCTTATGGTCCTCACGCGGCTAACGTCGTAGGTTTAACTGACCAAACTGATTTG TTCTTCACCATGCGGGATGCGATGGCACTTAAATAA
Upstream 100 bases:
>100_bases AAATGAGAGGGCAAACGTTTGAATGATAATTAGTGGTATCTGTCATAAAAGCGTCACCCGGCTGTTCTAGTATCCGTTGT AACCAATCAATACAAATTGT
Downstream 100 bases:
>100_bases GTCGCCTGTTATCTCACTGGAACGTCCCGGCGCAGTAATGGCCGGGATTTTTGCTTATGTCCCGTCACGGTAATCCTGCT TATATCTGGAAAATTCTGTT
Product: alkaline phosphatase
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MTVLQQGIISMNRVPTLSGIALSSGIALSTLLLSSALLTPNAIAAATGLYDRAAHGDVTQFGGARRLTEDQTQALRDSLS NKTVKNVILLIGDGMGDSEITSARNYAMGAGGFFKGIDALPLTGQYTHYALDKKTQKPNYVTDSAASATAWSSGVKTYNG ALGVDVFGKDHVTLLELAKKAGKATGNVSTAELQDATPAAQFAHVTGRKCYGPEETSEKCSTNALEKGGRGSITEQMIEG RADVTLGGGAASFSQVAKAGEWKDQSLRDQALARGYVIVENLDDLNAIKHANQQKPLLGLFSPGNMPVRWQGPKASYHGN LDKPPVVCENNAERTSDIPTLAVMTEKAIDLLKTNENGFFLQVEGASIDKQDHSANPCGQFGETVDLDEAVQKALEFARA DGNTLVIVTADHAHSSQIIEPEAKAPGLTQALTTKDGAVMAISYGNSEDDSQGHTGSQLRIAAYGPHAANVVGLTDQTDL FFTMRDAMALK
Sequences:
>Translated_491_residues MTVLQQGIISMNRVPTLSGIALSSGIALSTLLLSSALLTPNAIAAATGLYDRAAHGDVTQFGGARRLTEDQTQALRDSLS NKTVKNVILLIGDGMGDSEITSARNYAMGAGGFFKGIDALPLTGQYTHYALDKKTQKPNYVTDSAASATAWSSGVKTYNG ALGVDVFGKDHVTLLELAKKAGKATGNVSTAELQDATPAAQFAHVTGRKCYGPEETSEKCSTNALEKGGRGSITEQMIEG RADVTLGGGAASFSQVAKAGEWKDQSLRDQALARGYVIVENLDDLNAIKHANQQKPLLGLFSPGNMPVRWQGPKASYHGN LDKPPVVCENNAERTSDIPTLAVMTEKAIDLLKTNENGFFLQVEGASIDKQDHSANPCGQFGETVDLDEAVQKALEFARA DGNTLVIVTADHAHSSQIIEPEAKAPGLTQALTTKDGAVMAISYGNSEDDSQGHTGSQLRIAAYGPHAANVVGLTDQTDL FFTMRDAMALK >Mature_490_residues TVLQQGIISMNRVPTLSGIALSSGIALSTLLLSSALLTPNAIAAATGLYDRAAHGDVTQFGGARRLTEDQTQALRDSLSN KTVKNVILLIGDGMGDSEITSARNYAMGAGGFFKGIDALPLTGQYTHYALDKKTQKPNYVTDSAASATAWSSGVKTYNGA LGVDVFGKDHVTLLELAKKAGKATGNVSTAELQDATPAAQFAHVTGRKCYGPEETSEKCSTNALEKGGRGSITEQMIEGR ADVTLGGGAASFSQVAKAGEWKDQSLRDQALARGYVIVENLDDLNAIKHANQQKPLLGLFSPGNMPVRWQGPKASYHGNL DKPPVVCENNAERTSDIPTLAVMTEKAIDLLKTNENGFFLQVEGASIDKQDHSANPCGQFGETVDLDEAVQKALEFARAD GNTLVIVTADHAHSSQIIEPEAKAPGLTQALTTKDGAVMAISYGNSEDDSQGHTGSQLRIAAYGPHAANVVGLTDQTDLF FTMRDAMALK
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=496, Percent_Identity=28.0241935483871, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI94721246, Length=497, Percent_Identity=27.9678068410463, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI116734717, Length=407, Percent_Identity=29.97542997543, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI157266292, Length=473, Percent_Identity=26.8498942917548, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI294660770, Length=397, Percent_Identity=29.4710327455919, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI294660772, Length=345, Percent_Identity=29.8550724637681, Blast_Score=100, Evalue=4e-21, Organism=Escherichia coli, GI48994877, Length=468, Percent_Identity=74.1452991452991, Blast_Score=716, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320689, Length=361, Percent_Identity=32.409972299169, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI21355151, Length=422, Percent_Identity=30.8056872037915, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI19921912, Length=380, Percent_Identity=30.2631578947368, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI18859923, Length=361, Percent_Identity=31.0249307479224, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24651554, Length=405, Percent_Identity=29.3827160493827, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI21355981, Length=363, Percent_Identity=30.5785123966942, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI21355149, Length=435, Percent_Identity=27.5862068965517, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24585213, Length=385, Percent_Identity=29.6103896103896, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI85725200, Length=381, Percent_Identity=28.8713910761155, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI85815833, Length=381, Percent_Identity=28.8713910761155, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI21358067, Length=393, Percent_Identity=28.2442748091603, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24657827, Length=393, Percent_Identity=29.7709923664122, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI24651556, Length=371, Percent_Identity=28.5714285714286, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI24657835, Length=397, Percent_Identity=27.2040302267003, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24657842, Length=382, Percent_Identity=26.7015706806283, Blast_Score=79, Evalue=9e-15,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 51815; Mature: 51683
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLQQGIISMNRVPTLSGIALSSGIALSTLLLSSALLTPNAIAAATGLYDRAAHGDVTQ CCHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHH FGGARRLTEDQTQALRDSLSNKTVKNVILLIGDGMGDSEITSARNYAMGAGGFFKGIDAL CCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCHHCCCCCC PLTGQYTHYALDKKTQKPNYVTDSAASATAWSSGVKTYNGALGVDVFGKDHVTLLELAKK CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH AGKATGNVSTAELQDATPAAQFAHVTGRKCYGPEETSEKCSTNALEKGGRGSITEQMIEG HCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCC RADVTLGGGAASFSQVAKAGEWKDQSLRDQALARGYVIVENLDDLNAIKHANQQKPLLGL CCCEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCEEEE FSPGNMPVRWQGPKASYHGNLDKPPVVCENNAERTSDIPTLAVMTEKAIDLLKTNENGFF ECCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHEECCCCEE LQVEGASIDKQDHSANPCGQFGETVDLDEAVQKALEFARADGNTLVIVTADHAHSSQIIE EEEECCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC PEAKAPGLTQALTTKDGAVMAISYGNSEDDSQGHTGSQLRIAAYGPHAANVVGLTDQTDL CCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCE FFTMRDAMALK EEEECHHHCCC >Mature Secondary Structure TVLQQGIISMNRVPTLSGIALSSGIALSTLLLSSALLTPNAIAAATGLYDRAAHGDVTQ CHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHH FGGARRLTEDQTQALRDSLSNKTVKNVILLIGDGMGDSEITSARNYAMGAGGFFKGIDAL CCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCHHCCCCCC PLTGQYTHYALDKKTQKPNYVTDSAASATAWSSGVKTYNGALGVDVFGKDHVTLLELAKK CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH AGKATGNVSTAELQDATPAAQFAHVTGRKCYGPEETSEKCSTNALEKGGRGSITEQMIEG HCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCC RADVTLGGGAASFSQVAKAGEWKDQSLRDQALARGYVIVENLDDLNAIKHANQQKPLLGL CCCEEECCCHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCEEEE FSPGNMPVRWQGPKASYHGNLDKPPVVCENNAERTSDIPTLAVMTEKAIDLLKTNENGFF ECCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHEECCCCEE LQVEGASIDKQDHSANPCGQFGETVDLDEAVQKALEFARADGNTLVIVTADHAHSSQIIE EEEECCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC PEAKAPGLTQALTTKDGAVMAISYGNSEDDSQGHTGSQLRIAAYGPHAANVVGLTDQTDL CCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCE FFTMRDAMALK EEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]