| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126012
Identifier: 22126012
GI number: 22126012
Start: 2345448
End: 2346242
Strand: Reverse
Name: 22126012
Synonym: y2124
Alternate gene names: NA
Gene position: 2346242-2345448 (Counterclockwise)
Preceding gene: 22126016
Following gene: 22126009
Centisome position: 51.0
GC content: 38.49
Gene sequence:
>795_bases ATGAATAAATCTTTACCCTTAATTTTAATGGCTATCTTAGCCGGGTGTGGTGCTAAGAAAAATACGCACAACCCCGTTGA TATTGACATTTACACATCAAATCGAATCAATAGCATTATAGAAACGCAAGTAAAAACAGCCGATCAATCTAATACGGGAG AAATCATCGCGAAGGTTTCAGCCGAATTTTTAGGGACACCTTACAAAGCGAATATGTTGATTGGCTCATCAACAGAACCA GAAAAACTAGTAATAGATTTCAGAGGGTTAGACTGCTTTACCTATCTGGATTATGTCGAATCTTTGCGTAAATCTAAAAA TAAAAATGACTTTATCAAACAGTTGGTAGGGGTTAGATATATTGATGGTGATATTAGTTACCAACATCGGAAACATTTCT TTACCGATTGGTCATCTCGCCCTCCTTTAAATGCCAAGGATATTACCGCTGAAATTAGTGCTCATACGTTAACTGTTACA AAATATCTCAATCAGAAAAGTGATGGCGGGGAATTTATCCCAACGCTGGGTGTGTTCAAGCGCGATGTTAGCTATATTCC TGCTGAGTTTATCAACGACTCTGTTATTGATAAACTGAGAACAGGTGATTATATCGGCATTTATACCCATATTGCGGGGC TGGATGTCACTCATACGGGTATTTTTATTATGACAAAAAATGGGCCGGTATTGCGTAATGCGTCTTCGCTGAAAGTGAAT GAAAAAGTCGTCGATTCACCTTTCATTGAGTATGTGAAGAAGACACCGGGAATTATTGTTCTACGGGCGCTATGA
Upstream 100 bases:
>100_bases TAATGTATTATTGTTGATGTTTAGTTTAAAATTTAAATAGTAGAGTAACGATGAAAATATTATATGGAAATAACAGGTTA ACAAGGCATAGAGGGATTTT
Downstream 100 bases:
>100_bases GGTTAGCCGTTGGCAAATGCAACGCGCACGAGTATAACGCCAGCCCAAAAAATAATTTTACTTACTGATGTCACTTGAGT TCTGCTGTTTAAAAAATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNKSLPLILMAILAGCGAKKNTHNPVDIDIYTSNRINSIIETQVKTADQSNTGEIIAKVSAEFLGTPYKANMLIGSSTEP EKLVIDFRGLDCFTYLDYVESLRKSKNKNDFIKQLVGVRYIDGDISYQHRKHFFTDWSSRPPLNAKDITAEISAHTLTVT KYLNQKSDGGEFIPTLGVFKRDVSYIPAEFINDSVIDKLRTGDYIGIYTHIAGLDVTHTGIFIMTKNGPVLRNASSLKVN EKVVDSPFIEYVKKTPGIIVLRAL
Sequences:
>Translated_264_residues MNKSLPLILMAILAGCGAKKNTHNPVDIDIYTSNRINSIIETQVKTADQSNTGEIIAKVSAEFLGTPYKANMLIGSSTEP EKLVIDFRGLDCFTYLDYVESLRKSKNKNDFIKQLVGVRYIDGDISYQHRKHFFTDWSSRPPLNAKDITAEISAHTLTVT KYLNQKSDGGEFIPTLGVFKRDVSYIPAEFINDSVIDKLRTGDYIGIYTHIAGLDVTHTGIFIMTKNGPVLRNASSLKVN EKVVDSPFIEYVKKTPGIIVLRAL >Mature_264_residues MNKSLPLILMAILAGCGAKKNTHNPVDIDIYTSNRINSIIETQVKTADQSNTGEIIAKVSAEFLGTPYKANMLIGSSTEP EKLVIDFRGLDCFTYLDYVESLRKSKNKNDFIKQLVGVRYIDGDISYQHRKHFFTDWSSRPPLNAKDITAEISAHTLTVT KYLNQKSDGGEFIPTLGVFKRDVSYIPAEFINDSVIDKLRTGDYIGIYTHIAGLDVTHTGIFIMTKNGPVLRNASSLKVN EKVVDSPFIEYVKKTPGIIVLRAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29437; Mature: 29437
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSLPLILMAILAGCGAKKNTHNPVDIDIYTSNRINSIIETQVKTADQSNTGEIIAKVS CCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHEEEH AEFLGTPYKANMLIGSSTEPEKLVIDFRGLDCFTYLDYVESLRKSKNKNDFIKQLVGVRY HHHHCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCEE IDGDISYQHRKHFFTDWSSRPPLNAKDITAEISAHTLTVTKYLNQKSDGGEFIPTLGVFK ECCCCCHHHHHHHHCCCCCCCCCCHHHEEEEHHHEEEEEEHHHCCCCCCCCCCCHHHHHH RDVSYIPAEFINDSVIDKLRTGDYIGIYTHIAGLDVTHTGIFIMTKNGPVLRNASSLKVN HHHHHCCHHHCCHHHHHHHHCCCEEEEEEEECCCEEEECEEEEEECCCCEEECCCCCEEC EKVVDSPFIEYVKKTPGIIVLRAL HHHHCCHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MNKSLPLILMAILAGCGAKKNTHNPVDIDIYTSNRINSIIETQVKTADQSNTGEIIAKVS CCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHEEEH AEFLGTPYKANMLIGSSTEPEKLVIDFRGLDCFTYLDYVESLRKSKNKNDFIKQLVGVRY HHHHCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCEE IDGDISYQHRKHFFTDWSSRPPLNAKDITAEISAHTLTVTKYLNQKSDGGEFIPTLGVFK ECCCCCHHHHHHHHCCCCCCCCCCHHHEEEEHHHEEEEEEHHHCCCCCCCCCCCHHHHHH RDVSYIPAEFINDSVIDKLRTGDYIGIYTHIAGLDVTHTGIFIMTKNGPVLRNASSLKVN HHHHHCCHHHCCHHHHHHHHCCCEEEEEEEECCCEEEECEEEEEECCCCEEECCCCCEEC EKVVDSPFIEYVKKTPGIIVLRAL HHHHCCHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA