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The map label for this gene is 22126011

Identifier: 22126011

GI number: 22126011

Start: 2342739

End: 2345279

Strand: Direct

Name: 22126011

Synonym: y2123

Alternate gene names: NA

Gene position: 2342739-2345279 (Clockwise)

Preceding gene: 22126010

Following gene: 22126013

Centisome position: 50.92

GC content: 47.42

Gene sequence:

>2541_bases
ATGAAATCATTAACCCCGCAGTTACTTAATGGCCAACAACTTCATGACCAGTTACAGCAGGTAACACAAGGTATCGACCA
AGCGATTGATTGGGTTAAGAGTACCCGCCAACATGCTGTTCGTTTGGATAGAGAAGCCGAACACTTAACCATTAAGTTAC
GCCGTATGCGTAATAAAGCGCACCCTCTATCTGAGACCGCGCTAACCGCGATGACTATTGGTTTTGTGGGGCAATCACAG
GCGGGGAAAAAACACCTTATCTCGGCACTGGCGGCCAATGAACATGGCCGATTGGAAAACACGCTCGGGGGGAAAAAACT
CGACTTTTGGCAACAAATTAGGCCGGAATATCAAACAACGGGCTTGGTTACTCGCTTTAGCTATCAGACAGAAGGTCATC
AAACGCACGGTCATGAAAGCAGAGCAACAAATGAAGCCTATCCGGTTCAGCTCACCTTACTCAGCGAAGTAGATATCGCC
AAAATCATCGCCCGTGCTTTCTTGCTGGATTGCCCTCAGGAAAATCCAGCTTATTCGTTGGATGAGCAACAGATTACCGA
ACATCTACGGCAGTTGATGATGCATAGGCGGCCAATCATTAACGCTGGGATCAATAGCGATGATGTGATTGCACTTTGGG
ACTCCCTTGCCCACCACGACACACAACGCCAGAAAGAACTGGCGACTCACTTCTGGCCTACCGCGATTGAACTGGCACCG
TATCTGAGTATTGATGACCGGGCCAAATTATTTTCGTTATTGTGGGGAGAAAACGATCCACTCACTGACGCTTATCGCCA
TTTTTCCTATATTTTACAGCACCTTAGCGGCACACAGAAATTATTAGCACCGCTAAGTGTTTTGGTTGACGATACCCTGT
TACCTGCCAATGGTGTCATGAATATTGCCACGCTTGGTGACTTGAATACACCTGCAGATAACCCTATCCAAGTGCTTCCC
TTGATCAACGGTCATACCGCGAAATGCGTGACACTGTCACAAGCGGAATTGACGCTGTTAGCGGTGGAACTGAAGATCCC
ACTCGATAAACCCGCGCGTGAAAGTGCATTTGAATCCGTTGAATTGCTTAATTTTCCTGATGCTCGCGGTTCACAAACTA
TCCCGGCATTAATGGAAAACGCCGCTTATCCGCTGGCCTCGCTACTGTCACAGGCTAAAAATGCCTATTTACTCGAACGT
TATACCAACCAACAGCAAATCAACCTGTTATTGGTGTGTACCGCCACCGATCAGCGTTCAGAGATAAAAAGTACCAGCAA
GGCATTGGATTATTGGGTTAAACAGACTCAGGGAGAGAGCGTTCAGATACGCTCGCGTCGTAATCCGGGTTTAATCTGGG
CCTTAACGCCCCATGATCAGCGCATTACCGCGAATCTACCTCTCTCCACCCCGACAGACGCCCAAACGCATGACGCGAAT
ATCAAAAATTACGATGAAGCGGTACAACGCTATGTTGGTAATCCCGGTGACAGTTGGGGAACCCTATTGGCATTGGATGC
ACGTGGGGTTGAACGGATGATCTCGTACCTATCGAAAGAAATCCTTCGGGATATCAAATCAGAACGTCTAACCGAACAAC
TTCACGAGTTACAACGGGAACTGACCAATAATCTGTTCACGGGTTGGTATCAACCTTCGGTTACGGACGAACGACAGCAA
AAACAACGTATTGTAGAAATATTACTTAAAGCGTTGCAAACCCGTACTGGGGTACATGGTGAATTGTTGGAGCAATTACT
TCCTTCCCGCGATGAACTACGCCGCCTTTATCTGCAACAGCACCTTTATCTATCACCCCGCCTTTATCAACAAGAGAAAA
AAGGGGTTGCGGATTTTTTCATACCACTCGCCAGCACTGAACCTTTCAGTATCGGTATCGATATCGATCTGTTTAGTGAC
CTTCCCACTCCCACTGAGCCATCGCTGACACCACAAGCCAGACATGATAACGATGAAGCGGAGTATGCCGCTCATGTGCA
TTATTATTGGATAAATCATCTACGCCAACTGCCCGATAATACTGCGCTACTTGAATTACTGGGCGTCACTAAACCCACGA
TAGAACTGCTGGTCGCGGAATTCATCACTGCCAGTATTCGGCTGGATATTGCTAGGAATTTACGACAGGCACTGGCTGAT
AACGAACCGGCGGATCTGCATCGTGCAGCCAAAGCGGACCGTCAGGTTTCTCGTGCGCTCACTGTACTCGGTGATTTCAT
TGCCTGGTTAGGTTTTTTGCAAATCAGCGAAGATAAGCGCCCGGATAGCCGCATCAACCGAGGGTATAAAATTTTTGCCC
AGCCCCCTAAATCAGTATCAACTTTAGGGGTCTCTCACCGGTTAACGCAACTGGCATTAACCCCAACCAACAGTACCGCA
TTTTATATCTATGATTGGTTAGTGGGTTTGGGTGAAATGATTATTCAAAACGTGGGATATTCAGCCAGTAATGAGATAAG
CGCGGCACAGCGGCAACAACTGGCGGCAATATTATCGGTGATAAAACCCGCAAATGATTAA

Upstream 100 bases:

>100_bases
GTGTGCCCTTGCATCATCTGCGACTTAAATTGAACACATTAGCCAGCAATGGCTCAGGATCCCCCCATTATTGGATCGAC
AGCGGGAGCGTATTTAGAAA

Downstream 100 bases:

>100_bases
ATAGACGGCTGATAACGTTAAATAAAGGGGAACGTGCCACAAAAATGCGCAACTCCCCGACGGAGAAGCGCATTTTTTAA
ACAGCAGAACTCAAGTGACA

Product: virulence factor

Products: NA

Alternate protein names: Virulence Factor SrfC-Like Protein; Virulence Effector SrfC; Virulence Factor SrfC; Virulence Protein; Virulence Effector Protein; Virulence Factor Protein; Protein Virulence Factor-Like Protein; Type III Secretion System Effector; HopL1 Protein; Protein Conserved In Bacteria Virulence Factor; Type III Effector Protein; Coiled-Coil Structure

Number of amino acids: Translated: 846; Mature: 846

Protein sequence:

>846_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALTAMTIGFVGQSQ
AGKKHLISALAANEHGRLENTLGGKKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIIARAFLLDCPQENPAYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
YLSIDDRAKLFSLLWGENDPLTDAYRHFSYILQHLSGTQKLLAPLSVLVDDTLLPANGVMNIATLGDLNTPADNPIQVLP
LINGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLER
YTNQQQINLLLVCTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFTGWYQPSVTDERQQ
KQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFIPLASTEPFSIGIDIDLFSD
LPTPTEPSLTPQARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIARNLRQALAD
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFAQPPKSVSTLGVSHRLTQLALTPTNSTA
FYIYDWLVGLGEMIIQNVGYSASNEISAAQRQQLAAILSVIKPAND

Sequences:

>Translated_846_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALTAMTIGFVGQSQ
AGKKHLISALAANEHGRLENTLGGKKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIIARAFLLDCPQENPAYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
YLSIDDRAKLFSLLWGENDPLTDAYRHFSYILQHLSGTQKLLAPLSVLVDDTLLPANGVMNIATLGDLNTPADNPIQVLP
LINGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLER
YTNQQQINLLLVCTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFTGWYQPSVTDERQQ
KQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFIPLASTEPFSIGIDIDLFSD
LPTPTEPSLTPQARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIARNLRQALAD
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFAQPPKSVSTLGVSHRLTQLALTPTNSTA
FYIYDWLVGLGEMIIQNVGYSASNEISAAQRQQLAAILSVIKPAND
>Mature_846_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALTAMTIGFVGQSQ
AGKKHLISALAANEHGRLENTLGGKKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIIARAFLLDCPQENPAYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
YLSIDDRAKLFSLLWGENDPLTDAYRHFSYILQHLSGTQKLLAPLSVLVDDTLLPANGVMNIATLGDLNTPADNPIQVLP
LINGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLER
YTNQQQINLLLVCTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFTGWYQPSVTDERQQ
KQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFIPLASTEPFSIGIDIDLFSD
LPTPTEPSLTPQARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIARNLRQALAD
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFAQPPKSVSTLGVSHRLTQLALTPTNSTA
FYIYDWLVGLGEMIIQNVGYSASNEISAAQRQQLAAILSVIKPAND

Specific function: Unknown

COG id: COG4458

COG function: function code S; Uncharacterized protein conserved in bacteria, putative virulence factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95320; Mature: 95320

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKA
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HPLSETALTAMTIGFVGQSQAGKKHLISALAANEHGRLENTLGGKKLDFWQQIRPEYQTT
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHCCCHHHC
GLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIAKIIARAFLLDCPQENPAYSL
CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
DEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
CHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
YLSIDDRAKLFSLLWGENDPLTDAYRHFSYILQHLSGTQKLLAPLSVLVDDTLLPANGVM
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCE
NIATLGDLNTPADNPIQVLPLINGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESV
EEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHH
ELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLERYTNQQQINLLLVCTATDQRS
HHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCEEEEEEEEECCCCHH
EIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCC
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRE
CCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNNLFTGWYQPSVTDERQQKQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQ
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHH
HLYLSPRLYQQEKKGVADFFIPLASTEPFSIGIDIDLFSDLPTPTEPSLTPQARHDNDEA
HHHCCCHHHHHHHCCHHHHEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCH
EYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIARNLRQALAD
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFAQPPKSVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCHHH
TLGVSHRLTQLALTPTNSTAFYIYDWLVGLGEMIIQNVGYSASNEISAAQRQQLAAILSV
HHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
IKPAND
HCCCCC
>Mature Secondary Structure
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKA
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HPLSETALTAMTIGFVGQSQAGKKHLISALAANEHGRLENTLGGKKLDFWQQIRPEYQTT
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHCCCHHHC
GLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIAKIIARAFLLDCPQENPAYSL
CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
DEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
CHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
YLSIDDRAKLFSLLWGENDPLTDAYRHFSYILQHLSGTQKLLAPLSVLVDDTLLPANGVM
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCE
NIATLGDLNTPADNPIQVLPLINGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESV
EEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHH
ELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLERYTNQQQINLLLVCTATDQRS
HHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCEEEEEEEEECCCCHH
EIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCC
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRE
CCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNNLFTGWYQPSVTDERQQKQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQ
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHH
HLYLSPRLYQQEKKGVADFFIPLASTEPFSIGIDIDLFSDLPTPTEPSLTPQARHDNDEA
HHHCCCHHHHHHHCCHHHHEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCH
EYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIARNLRQALAD
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFAQPPKSVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCHHH
TLGVSHRLTQLALTPTNSTAFYIYDWLVGLGEMIIQNVGYSASNEISAAQRQQLAAILSV
HHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
IKPAND
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA