Click here to switch to the map view.

The map label for this gene is cstA [H]

Identifier: 22125966

GI number: 22125966

Start: 2284450

End: 2286516

Strand: Reverse

Name: cstA [H]

Synonym: y2076

Alternate gene names: 22125966

Gene position: 2286516-2284450 (Counterclockwise)

Preceding gene: 22125967

Following gene: 22125965

Centisome position: 49.7

GC content: 50.12

Gene sequence:

>2067_bases
ATGAATAACATCAGGACCGTTGTCATATGGCTGACAGTGGCGCTAATCGGTGCATTTGCCTTTGCCATGTTGGCCCTTAG
CCGGGGTGAACATGTCAATGCCATCTGGTTAGTGATTGCATCCGTGGCTTGTTACAGCATCGCTTATCGCTTCTACAGTC
GGTTTATTGCCAAGAATGTCTTTGAACTGGATGACCGTCGTCTGACGCCAGCAGAACGACGCAATGACGGTCTGGATTAT
GTTCCTACCAACAAATGGGTGTTGTTTGGTCACCACTTTGCTGCCATCGCGGGTGCTGGGCCACTGGTCGGGCCAATCCT
GGCCGCACAGATGGGTTTTCTGCCGGGGACTATCTGGATCCTGGTCGGTGTAATGATGGCCGGTGCCGTACAGGACTTCT
TAATCCTGTTTATCTCCACTCGCCGCGATGGCCGCTCACTGGGTGAAATGGCAAAGCAAGAGTTGGGGGCATTTGCTGGT
GTGATAACTATGCTGGGTGCATTGGGCGTAATGATTATCATTTTGTCCGCACTCGCACTGGTGGTGGTAAAAGCATTAGC
TGATAGCCCGTGGGGCCTGTTTACCATTGCCGCAACGATCCCCATTGCCCTCTTTATGGGCGTTTATATGCGGTTTATCC
GCCCTGGTAAAATTGCTGAAGTGTCATTGATCGGTTTCGTACTGATGATGTCTGCAATCATTTACGGTGGGAACATCGCG
GTACACCCTTACTGGGGGCCTTTCTTTACGTTACATGGCACCACGCTAACCTGGATATTGGTTATCTATGGTTTCATCGC
CTCTGTACTGCCAGTGTGGTTGCTGCTAGCACCACGAGATTACTTATCAACCTTCCTGAAAATTGGGGTCATCATTGGTT
TAGCGGTTGGTATTGTATTCGCCATGCCAGAAATGAAGATGCCCGCGGTCTCACGCTTTATTGATGGCAGCGGCCCGGTC
TTCTCCGGCAGCCTGTTCCCGTTCCTGTTTATTACTATCGCTTGTGGTGCTATCTCTGGCTTCCATGCTCTGGTATCCAG
TGGCACCACACCGAAACTGATTGAACGCGAAAGCCATACCCGCTTTATCGGCTACGGCGCAATGTTGATGGAGTCATTCG
TTGCCATCATGGCGCTAATCTGTGCCTCGGTTATCGACCCTGGTGTTTATTTCGCCATGAACTCACCCGCGGCTCTGATT
GGTACCACCGTAGAAAGTGCCTCGCTGGCCATTAGTAGCTGGGGGTTTGTCGTTACGCCAGAAACACTGGCGATGGTCGC
CAAAGATGTTGGTGAAAACTCGATTCTGTCACGGGCTGGTGGTGCACCGACCTTCGCTGTGGGCATGGCGCATATCATCA
GTGAAATATTCAATAGCCGTAATATGATGGCTTTCTGGTATCACTTTGCCATCTTGTTTGAAGCCATGTTTATTCTGACT
GCGGTCGATGCTGGTACCCGTGCCTGCCGCTTTATGGTTCAGGATCTGGTTGGGGTGGTCGTACCTCGTCTGGCCAATAA
CCGTTCATGGTTTGGTAACCTTTCCGGAACGACAGTCGCGGTAGCCGGTTGGGGATTCTTCGTTTACCAAGGTGTTATCG
ACCCACTGGGGGGAATAAACACCTTGTGGCCGCTGTTCGGTATTGGTAACCAAATGCTGGCATCAATGGCACTGATTCTA
GGTACCGTCGTACTGTTTAAAATGAAGAAACAACGCTACGCCTGGGTTACCATCTTGCCAACAATTTGGTTATTTATCAC
CTCAATGACCGCAGGTTGGCAGAAGATATTCCATGAAAAACCAAGTATTGGCTTCCTTGCTCAAGCAAAAAAATTCTCTA
ACGGCATTGAACAAGGGGTGTTAATCGCACCCGCGAAGAGCTTTAAAGACATGGAAACTATCGTGTTTAGCAACCAGATC
AACGCCGCGCTATGTGCATTCTTTATGCTGGTGGCGGTGACGATGCTAGTTTCTGCCTTCTTTGTGATTCGTCGCGCACT
GAAATCCAGCAAACCAACAACCCATGAAACTGAAATTGTATACCGTGAGGAGGTCGCCCGTGGTTAA

Upstream 100 bases:

>100_bases
ACATCAAAGCTCCTATGTTAAGTAACCGTTACGCGCTCTCTTACCCCTGAACGGCGTTGATAACAGTAAAACCTCATACA
TTGCGAAGGAGTCGTTACCC

Downstream 100 bases:

>100_bases
CTCTGGTATTCCGTACCGCTCCCGGCCAATAACCGGGGGGAAGATTACTCGCTGCGTGCCACTTACTCAGGTCGAAGCAG
CCCCAACCACGCTGTGGGCA

Product: carbon starvation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 688; Mature: 688

Protein sequence:

>688_residues
MNNIRTVVIWLTVALIGAFAFAMLALSRGEHVNAIWLVIASVACYSIAYRFYSRFIAKNVFELDDRRLTPAERRNDGLDY
VPTNKWVLFGHHFAAIAGAGPLVGPILAAQMGFLPGTIWILVGVMMAGAVQDFLILFISTRRDGRSLGEMAKQELGAFAG
VITMLGALGVMIIILSALALVVVKALADSPWGLFTIAATIPIALFMGVYMRFIRPGKIAEVSLIGFVLMMSAIIYGGNIA
VHPYWGPFFTLHGTTLTWILVIYGFIASVLPVWLLLAPRDYLSTFLKIGVIIGLAVGIVFAMPEMKMPAVSRFIDGSGPV
FSGSLFPFLFITIACGAISGFHALVSSGTTPKLIERESHTRFIGYGAMLMESFVAIMALICASVIDPGVYFAMNSPAALI
GTTVESASLAISSWGFVVTPETLAMVAKDVGENSILSRAGGAPTFAVGMAHIISEIFNSRNMMAFWYHFAILFEAMFILT
AVDAGTRACRFMVQDLVGVVVPRLANNRSWFGNLSGTTVAVAGWGFFVYQGVIDPLGGINTLWPLFGIGNQMLASMALIL
GTVVLFKMKKQRYAWVTILPTIWLFITSMTAGWQKIFHEKPSIGFLAQAKKFSNGIEQGVLIAPAKSFKDMETIVFSNQI
NAALCAFFMLVAVTMLVSAFFVIRRALKSSKPTTHETEIVYREEVARG

Sequences:

>Translated_688_residues
MNNIRTVVIWLTVALIGAFAFAMLALSRGEHVNAIWLVIASVACYSIAYRFYSRFIAKNVFELDDRRLTPAERRNDGLDY
VPTNKWVLFGHHFAAIAGAGPLVGPILAAQMGFLPGTIWILVGVMMAGAVQDFLILFISTRRDGRSLGEMAKQELGAFAG
VITMLGALGVMIIILSALALVVVKALADSPWGLFTIAATIPIALFMGVYMRFIRPGKIAEVSLIGFVLMMSAIIYGGNIA
VHPYWGPFFTLHGTTLTWILVIYGFIASVLPVWLLLAPRDYLSTFLKIGVIIGLAVGIVFAMPEMKMPAVSRFIDGSGPV
FSGSLFPFLFITIACGAISGFHALVSSGTTPKLIERESHTRFIGYGAMLMESFVAIMALICASVIDPGVYFAMNSPAALI
GTTVESASLAISSWGFVVTPETLAMVAKDVGENSILSRAGGAPTFAVGMAHIISEIFNSRNMMAFWYHFAILFEAMFILT
AVDAGTRACRFMVQDLVGVVVPRLANNRSWFGNLSGTTVAVAGWGFFVYQGVIDPLGGINTLWPLFGIGNQMLASMALIL
GTVVLFKMKKQRYAWVTILPTIWLFITSMTAGWQKIFHEKPSIGFLAQAKKFSNGIEQGVLIAPAKSFKDMETIVFSNQI
NAALCAFFMLVAVTMLVSAFFVIRRALKSSKPTTHETEIVYREEVARG
>Mature_688_residues
MNNIRTVVIWLTVALIGAFAFAMLALSRGEHVNAIWLVIASVACYSIAYRFYSRFIAKNVFELDDRRLTPAERRNDGLDY
VPTNKWVLFGHHFAAIAGAGPLVGPILAAQMGFLPGTIWILVGVMMAGAVQDFLILFISTRRDGRSLGEMAKQELGAFAG
VITMLGALGVMIIILSALALVVVKALADSPWGLFTIAATIPIALFMGVYMRFIRPGKIAEVSLIGFVLMMSAIIYGGNIA
VHPYWGPFFTLHGTTLTWILVIYGFIASVLPVWLLLAPRDYLSTFLKIGVIIGLAVGIVFAMPEMKMPAVSRFIDGSGPV
FSGSLFPFLFITIACGAISGFHALVSSGTTPKLIERESHTRFIGYGAMLMESFVAIMALICASVIDPGVYFAMNSPAALI
GTTVESASLAISSWGFVVTPETLAMVAKDVGENSILSRAGGAPTFAVGMAHIISEIFNSRNMMAFWYHFAILFEAMFILT
AVDAGTRACRFMVQDLVGVVVPRLANNRSWFGNLSGTTVAVAGWGFFVYQGVIDPLGGINTLWPLFGIGNQMLASMALIL
GTVVLFKMKKQRYAWVTILPTIWLFITSMTAGWQKIFHEKPSIGFLAQAKKFSNGIEQGVLIAPAKSFKDMETIVFSNQI
NAALCAFFMLVAVTMLVSAFFVIRRALKSSKPTTHETEIVYREEVARG

Specific function: Peptide utilization during carbon starvation [H]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=682, Percent_Identity=61.2903225806452, Blast_Score=856, Evalue=0.0,
Organism=Escherichia coli, GI87082431, Length=698, Percent_Identity=55.8739255014327, Blast_Score=799, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 74772; Mature: 74772

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848300; 9278503; 2521622 [H]