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The map label for this gene is ompX [H]

Identifier: 22125926

GI number: 22125926

Start: 2243453

End: 2243992

Strand: Direct

Name: ompX [H]

Synonym: y2034

Alternate gene names: 22125926

Gene position: 2243453-2243992 (Clockwise)

Preceding gene: 22125923

Following gene: 22125927

Centisome position: 48.76

GC content: 42.96

Gene sequence:

>540_bases
ATGAAATGGATTACGACATTAGCGCCTCTTTCACTCGCATTATCTTTGGGTATCTCGGTGGCGAATGCTGCCAGTGATGC
TAGCAACACGGTATCTTTCGGTTACGCTCAGAGTACGCTAAAAATTGATGGGGAGAAAATTGGAAAAGATAATAAAGGTT
TTAATCTAAAGTATCGCCATGAGTTAGATTCAGTACTTGGCATTGTCGCCTCTTTTACCCATACCAAGCAAAACTACGGT
ATGCCTGGAGATAGCGATGGGAAGAGAAAGGTTGAGTATTATTCTTTGATGGTGGGTCCTAGTTGGCGCTTTAATGAATT
CGTCAGTGCCTACGCATTAATAGGTGCAACCCAAGGTAAGAGTACACACACTAAGCCGCGTATGGTAAGCAACACTGTTA
GCAAAACAAGCATGGGGTATGGTGCTGGCTTGCAGTTCAATCCGGTAAAACACGTTGCTATTGATACAGCTTATGAATAC
GCCAAAATAGAGGATGTAAAAATAGGAACTTGGATTGTGGGGGTTGGTTACCGCTTCTAA

Upstream 100 bases:

>100_bases
TCATGAGAGTTAATAATTATCTGAATAATTGGATTTGCAATAAAATAAACTATAAGTTTCCTGCCTTATCAAAAATTAAC
TTTTAATAAATGGAATCATT

Downstream 100 bases:

>100_bases
TATTCTGTTGATTAACGCAGATAACCAGAATGACTTACTGGTTATTATTACTTTTATGCCACCTTATAAACTCGGTGGCT
TTTACATTCGGATAACAAAA

Product: attachment invasion locus protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKWITTLAPLSLALSLGISVANAASDASNTVSFGYAQSTLKIDGEKIGKDNKGFNLKYRHELDSVLGIVASFTHTKQNYG
MPGDSDGKRKVEYYSLMVGPSWRFNEFVSAYALIGATQGKSTHTKPRMVSNTVSKTSMGYGAGLQFNPVKHVAIDTAYEY
AKIEDVKIGTWIVGVGYRF

Sequences:

>Translated_179_residues
MKWITTLAPLSLALSLGISVANAASDASNTVSFGYAQSTLKIDGEKIGKDNKGFNLKYRHELDSVLGIVASFTHTKQNYG
MPGDSDGKRKVEYYSLMVGPSWRFNEFVSAYALIGATQGKSTHTKPRMVSNTVSKTSMGYGAGLQFNPVKHVAIDTAYEY
AKIEDVKIGTWIVGVGYRF
>Mature_179_residues
MKWITTLAPLSLALSLGISVANAASDASNTVSFGYAQSTLKIDGEKIGKDNKGFNLKYRHELDSVLGIVASFTHTKQNYG
MPGDSDGKRKVEYYSLMVGPSWRFNEFVSAYALIGATQGKSTHTKPRMVSNTVSKTSMGYGAGLQFNPVKHVAIDTAYEY
AKIEDVKIGTWIVGVGYRF

Specific function: Promotes the invasion of pathogenic bacteria into eukaryotic cells by an unknown mechanism [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ail/ompX/pagC/lom family [H]

Homologues:

Organism=Escherichia coli, GI1787034, Length=182, Percent_Identity=42.8571428571429, Blast_Score=131, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000758
- InterPro:   IPR011250 [H]

Pfam domain/function: PF06316 Ail_Lom [H]

EC number: NA

Molecular weight: Translated: 19518; Mature: 19518

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWITTLAPLSLALSLGISVANAASDASNTVSFGYAQSTLKIDGEKIGKDNKGFNLKYRH
CCCHHHHHHHHHHHHHCCCEECCCCCCCCCEEECCCCEEEEECHHHCCCCCCCCCEEEHH
ELDSVLGIVASFTHTKQNYGMPGDSDGKRKVEYYSLMVGPSWRFNEFVSAYALIGATQGK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHEECCCCC
STHTKPRMVSNTVSKTSMGYGAGLQFNPVKHVAIDTAYEYAKIEDVKIGTWIVGVGYRF
CCCCCCHHHHHHHHHHCCCCCCCCEECCCCEEEEECHHHHHEEEEEEEEEEEEECCCCC
>Mature Secondary Structure
MKWITTLAPLSLALSLGISVANAASDASNTVSFGYAQSTLKIDGEKIGKDNKGFNLKYRH
CCCHHHHHHHHHHHHHCCCEECCCCCCCCCEEECCCCEEEEECHHHCCCCCCCCCEEEHH
ELDSVLGIVASFTHTKQNYGMPGDSDGKRKVEYYSLMVGPSWRFNEFVSAYALIGATQGK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHEECCCCC
STHTKPRMVSNTVSKTSMGYGAGLQFNPVKHVAIDTAYEYAKIEDVKIGTWIVGVGYRF
CCCCCCHHHHHHHHHHCCCCCCCCEECCCCEEEEECHHHHHEEEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1688838 [H]