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The map label for this gene is togN [H]

Identifier: 22125776

GI number: 22125776

Start: 2081219

End: 2082205

Strand: Reverse

Name: togN [H]

Synonym: y1883

Alternate gene names: 22125776

Gene position: 2082205-2081219 (Counterclockwise)

Preceding gene: 22125777

Following gene: 22125775

Centisome position: 45.26

GC content: 44.78

Gene sequence:

>987_bases
TTGCCTCAATTGCATTTAAATCATCTAAATATTGGGTCTTCTACTCCGCCGATAAAGGAGGAAAAAATGACTGACGTACA
ACAAACTTCCAACCAGAAAAAATCAGATCTGGCTCAGGATATTGCTGATGCGGAAATTAGCCGCACATTACGCAAAGCTA
AAGTCAGTGCTGCTTTCCGCTATATCGTTTTGATTATTGTCGGTCTGTTAATGCTTTATCCGCTGTTGTGGATGTTCTCA
GCAGCATTTAAGCCTAATAATGAAATTTTCACTACATTAGGATTATGGCCAGAGCACCCGACAAGTGATGGTTTCATTAA
CGGCTGGAAAACCGGTACTGAATATAATTTCGGTCATTACATGCTGAACACCTTTAAGTATGTTATTCCGAAAGTGATCC
TGACCATTATCTCTTCCACCATTGTCGCTTATGGCTTTGCGCGCTTTGAGATCCCTTGGAAGAAATTCTGGTTTACCACC
TTGATCACCACCATGTTGCTGCCAAGTACCGTGTTGTTGATCCCGCAATACATCATGTTCCGTGAAATGGGCATGCTGAA
TAGCTACTTACCGCTCTATCTGCCGCTGGCCTTCGCCACACAAGGGTTCTTCGTTTTCATGCTGATCCAGTTCTTGCGCG
GTGTCCCGCGTGATATGGAAGAAGCAGCACAAATTGACGGCTGTAACTCTTTCCAGGTGTTGTGGTATGTGGTAGTGCCA
ATTTTAAAACCGGCCATTATCTCTGTCGCCCTGTTCCAGTTCATGTGGTCAATGAACGACTTTATCGGCCCACTGATTTA
TGTCTATAGCGTAGATAAGTACCCGATAGCGCTAGCTCTGAAGATGTCAATTGACGTTACCGAAGGCGCACCGTGGAACG
AAATTCTGGCAATGGCAAGCATCTCCATTCTGCCGTCCATCATTGTTTTCTTCCTGGCTCAACGCTACTTCGTGCAAGGC
GTAACCAGCAGCGGAATTAAAGGTTAA

Upstream 100 bases:

>100_bases
TATTTATTCTCACTCTATATCTACGATACAGCGTTTAAATATTTTGATATGGGATACGGCGCTGCATTAGCCTGGGTGTT
ATTCCTGGTCGTCGCCCTCT

Downstream 100 bases:

>100_bases
TAGAGGATTTATCATGGCTGAAGTCATTTTCAATAAATTAGGTAAAGTTTACTCCAACGGTTTCCGCGCGGTACATGGCA
TTGACCTGAAGATTAATGAT

Product: inner membrane permease of oligogalacturonide ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MPQLHLNHLNIGSSTPPIKEEKMTDVQQTSNQKKSDLAQDIADAEISRTLRKAKVSAAFRYIVLIIVGLLMLYPLLWMFS
AAFKPNNEIFTTLGLWPEHPTSDGFINGWKTGTEYNFGHYMLNTFKYVIPKVILTIISSTIVAYGFARFEIPWKKFWFTT
LITTMLLPSTVLLIPQYIMFREMGMLNSYLPLYLPLAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNSFQVLWYVVVP
ILKPAIISVALFQFMWSMNDFIGPLIYVYSVDKYPIALALKMSIDVTEGAPWNEILAMASISILPSIIVFFLAQRYFVQG
VTSSGIKG

Sequences:

>Translated_328_residues
MPQLHLNHLNIGSSTPPIKEEKMTDVQQTSNQKKSDLAQDIADAEISRTLRKAKVSAAFRYIVLIIVGLLMLYPLLWMFS
AAFKPNNEIFTTLGLWPEHPTSDGFINGWKTGTEYNFGHYMLNTFKYVIPKVILTIISSTIVAYGFARFEIPWKKFWFTT
LITTMLLPSTVLLIPQYIMFREMGMLNSYLPLYLPLAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNSFQVLWYVVVP
ILKPAIISVALFQFMWSMNDFIGPLIYVYSVDKYPIALALKMSIDVTEGAPWNEILAMASISILPSIIVFFLAQRYFVQG
VTSSGIKG
>Mature_327_residues
PQLHLNHLNIGSSTPPIKEEKMTDVQQTSNQKKSDLAQDIADAEISRTLRKAKVSAAFRYIVLIIVGLLMLYPLLWMFSA
AFKPNNEIFTTLGLWPEHPTSDGFINGWKTGTEYNFGHYMLNTFKYVIPKVILTIISSTIVAYGFARFEIPWKKFWFTTL
ITTMLLPSTVLLIPQYIMFREMGMLNSYLPLYLPLAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNSFQVLWYVVVPI
LKPAIISVALFQFMWSMNDFIGPLIYVYSVDKYPIALALKMSIDVTEGAPWNEILAMASISILPSIIVFFLAQRYFVQGV
TSSGIKG

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=271, Percent_Identity=26.1992619926199, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787571, Length=269, Percent_Identity=22.6765799256506, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790464, Length=279, Percent_Identity=25.089605734767, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37284; Mature: 37152

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLHLNHLNIGSSTPPIKEEKMTDVQQTSNQKKSDLAQDIADAEISRTLRKAKVSAAFR
CCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIVLIIVGLLMLYPLLWMFSAAFKPNNEIFTTLGLWPEHPTSDGFINGWKTGTEYNFGHY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
MLNTFKYVIPKVILTIISSTIVAYGFARFEIPWKKFWFTTLITTMLLPSTVLLIPQYIMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REMGMLNSYLPLYLPLAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNSFQVLWYVVVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHH
ILKPAIISVALFQFMWSMNDFIGPLIYVYSVDKYPIALALKMSIDVTEGAPWNEILAMAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHH
ISILPSIIVFFLAQRYFVQGVTSSGIKG
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PQLHLNHLNIGSSTPPIKEEKMTDVQQTSNQKKSDLAQDIADAEISRTLRKAKVSAAFR
CCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIVLIIVGLLMLYPLLWMFSAAFKPNNEIFTTLGLWPEHPTSDGFINGWKTGTEYNFGHY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
MLNTFKYVIPKVILTIISSTIVAYGFARFEIPWKKFWFTTLITTMLLPSTVLLIPQYIMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REMGMLNSYLPLYLPLAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNSFQVLWYVVVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHH
ILKPAIISVALFQFMWSMNDFIGPLIYVYSVDKYPIALALKMSIDVTEGAPWNEILAMAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHH
ISILPSIIVFFLAQRYFVQGVTSSGIKG
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]