Click here to switch to the map view.

The map label for this gene is 22125765

Identifier: 22125765

GI number: 22125765

Start: 2067827

End: 2068996

Strand: Direct

Name: 22125765

Synonym: y1872

Alternate gene names: NA

Gene position: 2067827-2068996 (Clockwise)

Preceding gene: 22125764

Following gene: 22125766

Centisome position: 44.95

GC content: 46.07

Gene sequence:

>1170_bases
ATGCAAATGAGTGCTTATTTCTATAGGGTGAAAACAGTGATTCGGCATATCAACATGTACCTGCGCGTTTATGCTCATGT
CCGTTCTGTTGCTACGCTACTGATATTGGTCGTTGTGGCTGGGGGGCCAAGCAGTAAAGTGTGGGCTGAAGGCCTCGGGA
TAAATTGTGACTATACTGGCAGTATTTATATCAATCCCCCTACCAGTATTATTCGTGTTAAGCCTAATGCGGCCATAGGT
GATCCTATTGGTTCATGGATGACCATCAGTGCACCTGAAGTTTGGTCATGCGCGCTATTACCCGCTTACCAGTCCCGGGA
TGTGCGGGCTGGGATTTTGGTATTTTCACCTTATAATCCATTGCTTACGACCAATATTGATGGTGGTAATTACAAAGTTT
TCCGCACTGGCGATACTAATCCTGGCTTGGGAATTGCCGTACGTTTTCGTGCTATCGGGGCCGGTTTTAGCAGCGATTGG
ACCCAACTAGAGGGTTTTGGGCTCGTAGACGGCACGGTGAGTGCCCCATTAATAGGACCGATTCCTTATAATGATGGGAT
TAAATTTCCCTTAGGAATGGAAATGCAAATTCACTATGTGAAGGCGAGTGAGGAGCTAAGATCGGGTGGCGTAAGGATAT
TTGATTTTGCTTATCTTTACCATCGGCGCTCCATTGATGGTGTGCCGGATAATAGTGGTGCTCGTTACAGGATTGTTCAG
GTCCCGGCAAATAGCATTGATATTCAGATAATGACGCAAACCTGTACCACGCCTGATGTGGTCGTGAATCTACCTGAGGT
CAATTCGCGGCAGTTTACCGGCATTGGTACGGTGAAAGCACTTAAAGCTTTTAATCTGAATTTTAATCATTGCCCAGGTG
GACTAGACGGTATTAATTATAAATTTGGTGCGACGACGAGTATTCTGGATTCGGCTAATGGTGTTGTTGCGTTGGATGCC
AACTCGACTGCTGAGGGGGTGGGGGTATTACTGCGCAGCCAATCAGATGCGGCGATTGAATTGGATAAGGAATACACGAT
GAGTGGTTATGACACCAGTAGCACACAAAGTTACACGGTCCCCATGCAGGCGGGAATTTACCAAATAGAAAACACCGTGA
CACCTGGTTCAGTAAAAGGTGAGTTCACATTTACGTTGATCTATAAATGA

Upstream 100 bases:

>100_bases
ATGGCATCGGTGAGAGTTGCAGTTTTGACTATAAATTGCCGGAAGGTAACCTAGTAAAAGGTCATCTGGTCAAAGGTGAC
TACCGGCGCTTAGAGGTGAT

Downstream 100 bases:

>100_bases
AAACGTTATGGCTAATCCTCAGGCCGCGTGCCCGTAAGGTGAATAATCTGCGTACTTTACTGATTACGGCTATTTTAAGC
AGTTTGGTGTTGAGTGCTAC

Product: fimbrial componenet

Products: NA

Alternate protein names: Fimbrial Componenet; Type-1 Fimbrial Protein A Subunit

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MQMSAYFYRVKTVIRHINMYLRVYAHVRSVATLLILVVVAGGPSSKVWAEGLGINCDYTGSIYINPPTSIIRVKPNAAIG
DPIGSWMTISAPEVWSCALLPAYQSRDVRAGILVFSPYNPLLTTNIDGGNYKVFRTGDTNPGLGIAVRFRAIGAGFSSDW
TQLEGFGLVDGTVSAPLIGPIPYNDGIKFPLGMEMQIHYVKASEELRSGGVRIFDFAYLYHRRSIDGVPDNSGARYRIVQ
VPANSIDIQIMTQTCTTPDVVVNLPEVNSRQFTGIGTVKALKAFNLNFNHCPGGLDGINYKFGATTSILDSANGVVALDA
NSTAEGVGVLLRSQSDAAIELDKEYTMSGYDTSSTQSYTVPMQAGIYQIENTVTPGSVKGEFTFTLIYK

Sequences:

>Translated_389_residues
MQMSAYFYRVKTVIRHINMYLRVYAHVRSVATLLILVVVAGGPSSKVWAEGLGINCDYTGSIYINPPTSIIRVKPNAAIG
DPIGSWMTISAPEVWSCALLPAYQSRDVRAGILVFSPYNPLLTTNIDGGNYKVFRTGDTNPGLGIAVRFRAIGAGFSSDW
TQLEGFGLVDGTVSAPLIGPIPYNDGIKFPLGMEMQIHYVKASEELRSGGVRIFDFAYLYHRRSIDGVPDNSGARYRIVQ
VPANSIDIQIMTQTCTTPDVVVNLPEVNSRQFTGIGTVKALKAFNLNFNHCPGGLDGINYKFGATTSILDSANGVVALDA
NSTAEGVGVLLRSQSDAAIELDKEYTMSGYDTSSTQSYTVPMQAGIYQIENTVTPGSVKGEFTFTLIYK
>Mature_389_residues
MQMSAYFYRVKTVIRHINMYLRVYAHVRSVATLLILVVVAGGPSSKVWAEGLGINCDYTGSIYINPPTSIIRVKPNAAIG
DPIGSWMTISAPEVWSCALLPAYQSRDVRAGILVFSPYNPLLTTNIDGGNYKVFRTGDTNPGLGIAVRFRAIGAGFSSDW
TQLEGFGLVDGTVSAPLIGPIPYNDGIKFPLGMEMQIHYVKASEELRSGGVRIFDFAYLYHRRSIDGVPDNSGARYRIVQ
VPANSIDIQIMTQTCTTPDVVVNLPEVNSRQFTGIGTVKALKAFNLNFNHCPGGLDGINYKFGATTSILDSANGVVALDA
NSTAEGVGVLLRSQSDAAIELDKEYTMSGYDTSSTQSYTVPMQAGIYQIENTVTPGSVKGEFTFTLIYK

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42178; Mature: 42178

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMSAYFYRVKTVIRHINMYLRVYAHVRSVATLLILVVVAGGPSSKVWAEGLGINCDYTG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCCCCEECE
SIYINPPTSIIRVKPNAAIGDPIGSWMTISAPEVWSCALLPAYQSRDVRAGILVFSPYNP
EEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCC
LLTTNIDGGNYKVFRTGDTNPGLGIAVRFRAIGAGFSSDWTQLEGFGLVDGTVSAPLIGP
EEEEEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEECCCEEECCCCCCCEEEC
IPYNDGIKFPLGMEMQIHYVKASEELRSGGVRIFDFAYLYHRRSIDGVPDNSGARYRIVQ
CCCCCCCCCCCCCEEEEEEEECCHHHHHCCEEEEEEEEEHHHCCCCCCCCCCCCEEEEEE
VPANSIDIQIMTQTCTTPDVVVNLPEVNSRQFTGIGTVKALKAFNLNFNHCPGGLDGINY
ECCCCEEEEEEEECCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCE
KFGATTSILDSANGVVALDANSTAEGVGVLLRSQSDAAIELDKEYTMSGYDTSSTQSYTV
ECCCCHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEEEECCCEEECCCCCCCCCEEEE
PMQAGIYQIENTVTPGSVKGEFTFTLIYK
EHHCCEEEEECCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MQMSAYFYRVKTVIRHINMYLRVYAHVRSVATLLILVVVAGGPSSKVWAEGLGINCDYTG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCCCCEECE
SIYINPPTSIIRVKPNAAIGDPIGSWMTISAPEVWSCALLPAYQSRDVRAGILVFSPYNP
EEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCC
LLTTNIDGGNYKVFRTGDTNPGLGIAVRFRAIGAGFSSDWTQLEGFGLVDGTVSAPLIGP
EEEEEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEECCCEEECCCCCCCEEEC
IPYNDGIKFPLGMEMQIHYVKASEELRSGGVRIFDFAYLYHRRSIDGVPDNSGARYRIVQ
CCCCCCCCCCCCCEEEEEEEECCHHHHHCCEEEEEEEEEHHHCCCCCCCCCCCCEEEEEE
VPANSIDIQIMTQTCTTPDVVVNLPEVNSRQFTGIGTVKALKAFNLNFNHCPGGLDGINY
ECCCCEEEEEEEECCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCE
KFGATTSILDSANGVVALDANSTAEGVGVLLRSQSDAAIELDKEYTMSGYDTSSTQSYTV
ECCCCHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEEEECCCEEECCCCCCCCCEEEE
PMQAGIYQIENTVTPGSVKGEFTFTLIYK
EHHCCEEEEECCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA