| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yebT [H]
Identifier: 22125756
GI number: 22125756
Start: 2054177
End: 2056834
Strand: Reverse
Name: yebT [H]
Synonym: y1863
Alternate gene names: 22125756
Gene position: 2056834-2054177 (Counterclockwise)
Preceding gene: 22125757
Following gene: 22125755
Centisome position: 44.71
GC content: 49.7
Gene sequence:
>2658_bases ATGCATATGCAACAGGAAACACCGAGTACACCGACTGAGGCTCATGTAAAACATAAACGCCGGTTCTCCCCCTTCTGGCT ACTGCCTTTTATTGCGCTACTGATCACGGGCTGGCTGATTTATAACAATTGGCAAGAACGTGGGACGGAAATCACTATTG ATTTTCAGTCAACTGCTGGAATTGTTGCTGGCCGCACACCCATCCGCTATCAAGGCGTGGATGTAGGTTTGGTTCAATCC ATCAGATTGGATGATAACCTGCGTAACATTAAAGTGACCGCCAGTATCAAAAATGATATGGAGGATTCACTACGTGAAGG TACCCAGTTCTGGCTAGTGACCCCCAAAGCCTCTCTGGCCGGTGTTTCTGGATTGGATGCGCTGGTGGGCGGTAATTATA TCGGCATGATGCCTGGTGAGGGTAAGCCGCAAAGCCATTTCACTGCATTGGATACTCAGCCTAAATTCCGCCTGAATACA GGCGAATTAATGATTCATCTCTCTGCCCCTGACCTCGGCTCACTCAATAACGGCTCGTTGGTTTACTATCGTAAAATTCC GGTTGGCAAAGTGTATGACTACACGATCGCCCCTGATAATAACGGGGTTATTATTGATGTCCTGATTGATAGACGATTTG CCAATTTGGTGAAAAAGGACTCTCGATTCTGGAATGTTTCTGGTTTTAAAGCTGATTTCAGCCTAAGCGGTGCCTCGGTG CAAATGGAGAGTCTGGCGGCGCTGGTCAATGGCGCAATTGCTTTCGATTCCCCACAAAATAGCCAAGATGCCGCGCCAGA TCAGCCTTTCCAACTTTATTCTGATTTAGCGCACAGTCAGCGCGGGGTGGCCATCACCCTGGATTTACCAGGGGGAAGTC ACTTGAGTGAGGGCCGTACCCCCCTGATTTATCAGGGGTTGCAAGTTGGTACTTTGACTAAAATGACGCTTCAACCAGAC CAAAAAGTGACGGGAGAGCTAACCATTGATCCCTCCGTAGTGAATTTGATGCGTAGTGGCACACGCATTGAAATGAATAG CCCGCGGATCAGCCTCAGTAATGCCAACGTAAGTGAACTGCTTACTGGTAATACATTAGAGCTGATCCCAGGCGACGGTG ATCCACAACAACATTTTACCGTACTGCCCAGCAGTAAAAGCCTGTTACAACAACCCAATGTCCTTGAATTGCAACTCACC GCGCCACAAAGCTATGGCATTGATGTCGGCCAGCCTATTTCACTACGTGGTATCAAGATTGGTCAGGTGTTAACCCGCGA ACTGTCAGCCGATGGCGTCACCTTTACGGCCGCGATAGAAGCGAAATATCGCCATCTGGTGCACAAGGACAGCAAATTTG TGGCAAACAGCCGCCTTGATGTCAACGTGGGGATTGATGGCGTTAACGTGCAAGGCGCCAGCGCACAAGAATGGATTGAT GGCGGTATTCTGCTTTTATCAGGTAGCAAAGGCGAGGTATCAGGTAGCAAGGGCGAGGCACTGAAACAATACCCCCTTTA CAGTAGCGTGGCAAAAGCAACTGATGGGATTTTAGGCAGTTCACCGGCAACGACCCTAACGCTAACGGCCAGCAGTTTGC CTGATATACAGGCCGGTTCTGTGGTGTTGTACCGTAAGTTTCAGGTGGGTGAAATTACTCACGTACGCCCTAAAGCCAAC GCCTTCGAAGTGGATGTTTACATTCAACCCGAGTATCGCAATCTACTAACCGAAAAGAGTATTTTTTGGTCAGAAGGGGG CGCAAAAGTACAACTGAGTGGGAGTGGCCTTACTGTACAAGCCTCACCGCTTAACCGGGCCTTAAAAGGGGCCATCAGCT TCGATAATCTAGAAGGCGTCACTCTGGATAAAGGGGCCAAGCGGACATTGTATAGTAATGAAACGGCCGCACGGGCCGTG GGTAGCCAGATTATATTGCGTACATTTGATGCCAGTAAACTGTCGGCGGGTATGCCAATCCGCTATTTGGGGATCGATAT TGGCCAAGTTGAGTCGCTGAAGCTGGCACCCGAGCGTAATGAAGTCTTAGCCAAAGCCGTACTTTACCCAGAATATGTGC AAAACTTTACCCGCGCGGGTACCCGTTTCTCCATCGTCTCACCGGAGATCTCGGCTGCAGGGGTCAATAATCTGGAGACC TTGTTCCAGCCCTACATTAATGTAGAGCCCGGTAAAGGGGGGCCCTTGCGCAATTTTGAGTTGCAGACCGCCACCATTAC TGACTCCCGTTATCTTGATGGCCTGAGCATCATACTGGATACCGCTGAAGCGGGTTCGTTGCAAGTTGGGACGCCAGTCC TGTTCCGTGGGCTTGAAGTTGGCACTGTCACCGGTTTTAATCTGGGTGCAATGTCCGATCGAGTGCAGGTATCACTGCGG ATAAGCCAAAAGTTTCAGCATCTAGTAAGACAAAACACGGTATTTTGGCTAGCATCAGGTTATAACTTTGAGTTCGGTCT GATAGGTGGTGTGGTGAAAAGCGGGACCTTCCAGCAGTTTATCCGTGGTGGTATCGCTTTCGCTACGCCACCAACCATAC CACTGGCACCGAGAGCCAATGTCAATCAGCACTTTTTGCTCGCCCCCGAAGAGCCTAAAGATTGGCGAAAATGGGGAACA GCCATTCCACGTTCTTAA
Upstream 100 bases:
>100_bases CTTTTTTCCTTCACTATGGGGCCAGCAGCCTTCTATTTTGGGTCTGCGGTTATTTTGACTATTCTTGCTGTTGAGTGGCT AGATAGCCGATTGATTTGGG
Downstream 100 bases:
>100_bases ATAATTCATCAGGGTGGTTCGCCATAAGCTGCCCTGATGATTACCCGTACTCATGCCCTGCACAGCAATCGCCATTCTTA TAAACCCTTTTTCTAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 885; Mature: 885
Protein sequence:
>885_residues MHMQQETPSTPTEAHVKHKRRFSPFWLLPFIALLITGWLIYNNWQERGTEITIDFQSTAGIVAGRTPIRYQGVDVGLVQS IRLDDNLRNIKVTASIKNDMEDSLREGTQFWLVTPKASLAGVSGLDALVGGNYIGMMPGEGKPQSHFTALDTQPKFRLNT GELMIHLSAPDLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNGVIIDVLIDRRFANLVKKDSRFWNVSGFKADFSLSGASV QMESLAALVNGAIAFDSPQNSQDAAPDQPFQLYSDLAHSQRGVAITLDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPD QKVTGELTIDPSVVNLMRSGTRIEMNSPRISLSNANVSELLTGNTLELIPGDGDPQQHFTVLPSSKSLLQQPNVLELQLT APQSYGIDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGIDGVNVQGASAQEWID GGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTLTLTASSLPDIQAGSVVLYRKFQVGEITHVRPKAN AFEVDVYIQPEYRNLLTEKSIFWSEGGAKVQLSGSGLTVQASPLNRALKGAISFDNLEGVTLDKGAKRTLYSNETAARAV GSQIILRTFDASKLSAGMPIRYLGIDIGQVESLKLAPERNEVLAKAVLYPEYVQNFTRAGTRFSIVSPEISAAGVNNLET LFQPYINVEPGKGGPLRNFELQTATITDSRYLDGLSIILDTAEAGSLQVGTPVLFRGLEVGTVTGFNLGAMSDRVQVSLR ISQKFQHLVRQNTVFWLASGYNFEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRKWGT AIPRS
Sequences:
>Translated_885_residues MHMQQETPSTPTEAHVKHKRRFSPFWLLPFIALLITGWLIYNNWQERGTEITIDFQSTAGIVAGRTPIRYQGVDVGLVQS IRLDDNLRNIKVTASIKNDMEDSLREGTQFWLVTPKASLAGVSGLDALVGGNYIGMMPGEGKPQSHFTALDTQPKFRLNT GELMIHLSAPDLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNGVIIDVLIDRRFANLVKKDSRFWNVSGFKADFSLSGASV QMESLAALVNGAIAFDSPQNSQDAAPDQPFQLYSDLAHSQRGVAITLDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPD QKVTGELTIDPSVVNLMRSGTRIEMNSPRISLSNANVSELLTGNTLELIPGDGDPQQHFTVLPSSKSLLQQPNVLELQLT APQSYGIDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGIDGVNVQGASAQEWID GGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTLTLTASSLPDIQAGSVVLYRKFQVGEITHVRPKAN AFEVDVYIQPEYRNLLTEKSIFWSEGGAKVQLSGSGLTVQASPLNRALKGAISFDNLEGVTLDKGAKRTLYSNETAARAV GSQIILRTFDASKLSAGMPIRYLGIDIGQVESLKLAPERNEVLAKAVLYPEYVQNFTRAGTRFSIVSPEISAAGVNNLET LFQPYINVEPGKGGPLRNFELQTATITDSRYLDGLSIILDTAEAGSLQVGTPVLFRGLEVGTVTGFNLGAMSDRVQVSLR ISQKFQHLVRQNTVFWLASGYNFEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRKWGT AIPRS >Mature_885_residues MHMQQETPSTPTEAHVKHKRRFSPFWLLPFIALLITGWLIYNNWQERGTEITIDFQSTAGIVAGRTPIRYQGVDVGLVQS IRLDDNLRNIKVTASIKNDMEDSLREGTQFWLVTPKASLAGVSGLDALVGGNYIGMMPGEGKPQSHFTALDTQPKFRLNT GELMIHLSAPDLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNGVIIDVLIDRRFANLVKKDSRFWNVSGFKADFSLSGASV QMESLAALVNGAIAFDSPQNSQDAAPDQPFQLYSDLAHSQRGVAITLDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPD QKVTGELTIDPSVVNLMRSGTRIEMNSPRISLSNANVSELLTGNTLELIPGDGDPQQHFTVLPSSKSLLQQPNVLELQLT APQSYGIDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGIDGVNVQGASAQEWID GGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTLTLTASSLPDIQAGSVVLYRKFQVGEITHVRPKAN AFEVDVYIQPEYRNLLTEKSIFWSEGGAKVQLSGSGLTVQASPLNRALKGAISFDNLEGVTLDKGAKRTLYSNETAARAV GSQIILRTFDASKLSAGMPIRYLGIDIGQVESLKLAPERNEVLAKAVLYPEYVQNFTRAGTRFSIVSPEISAAGVNNLET LFQPYINVEPGKGGPLRNFELQTATITDSRYLDGLSIILDTAEAGSLQVGTPVLFRGLEVGTVTGFNLGAMSDRVQVSLR ISQKFQHLVRQNTVFWLASGYNFEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRKWGT AIPRS
Specific function: Unknown
COG id: COG3008
COG function: function code R; Paraquat-inducible protein B
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqiB family [H]
Homologues:
Organism=Escherichia coli, GI87081984, Length=884, Percent_Identity=67.6470588235294, Blast_Score=1258, Evalue=0.0, Organism=Escherichia coli, GI1787184, Length=316, Percent_Identity=29.4303797468354, Blast_Score=157, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003399 [H]
Pfam domain/function: PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 96026; Mature: 96026
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHMQQETPSTPTEAHVKHKRRFSPFWLLPFIALLITGWLIYNNWQERGTEITIDFQSTAG CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCHHHCCCEEEEEECCCCC IVAGRTPIRYQGVDVGLVQSIRLDDNLRNIKVTASIKNDMEDSLREGTQFWLVTPKASLA EEECCCCEEEECCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHCCCEEEEECCCHHHC GVSGLDALVGGNYIGMMPGEGKPQSHFTALDTQPKFRLNTGELMIHLSAPDLGSLNNGSL CCCCCHHHHCCCEEEECCCCCCCCCCEEEECCCCCEEEECCEEEEEECCCCCCCCCCCCE VYYRKIPVGKVYDYTIAPDNNGVIIDVLIDRRFANLVKKDSRFWNVSGFKADFSLSGASV EEEEECCCCCEEEEEECCCCCCEEEEEEECHHHHHHHHCCCCEEECCCEEEEEEECCCCE QMESLAALVNGAIAFDSPQNSQDAAPDQPFQLYSDLAHSQRGVAITLDLPGGSHLSEGRT EHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC PLIYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMNSPRISLSNANVSEL CEEECCEEECEEEEEEECCCCCCCEEEEECHHHHHHHHCCCEEEECCCEEEECCCCHHHH LTGNTLELIPGDGDPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYGIDVGQPISLRGIKI HCCCEEEEECCCCCCCCEEEECCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCEECCEEH GQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGIDGVNVQGASAQEWID HHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCEEECCEEEEEECCCCEEECCCCHHHHCC GGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTLTLTASSLPDIQAGS CCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC VVLYRKFQVGEITHVRPKANAFEVDVYIQPEYRNLLTEKSIFWSEGGAKVQLSGSGLTVQ EEEEEEEECCCEEEECCCCCEEEEEEEECCHHHHHHHHCCEEECCCCCEEEECCCCEEEE ASPLNRALKGAISFDNLEGVTLDKGAKRTLYSNETAARAVGSQIILRTFDASKLSAGMPI CCCHHHHHHCCEEECCCCCEEECCCCCCEEECCCHHHHHHCCEEEEEEECCHHHCCCCCE RYLGIDIGQVESLKLAPERNEVLAKAVLYPEYVQNFTRAGTRFSIVSPEISAAGVNNLET EEEECCCCCCCEEEECCCHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH LFQPYINVEPGKGGPLRNFELQTATITDSRYLDGLSIILDTAEAGSLQVGTPVLFRGLEV HHCCCEEECCCCCCCCCCEEEEEEEECCCHHHCCEEEEEECCCCCCEEECCHHHHCCEEE GTVTGFNLGAMSDRVQVSLRISQKFQHLVRQNTVFWLASGYNFEFGLIGGVVKSGTFQQF EEEECCCCCCCCCEEEEEEEHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHCCCCHHHH IRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRKWGTAIPRS HHCCEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCC >Mature Secondary Structure MHMQQETPSTPTEAHVKHKRRFSPFWLLPFIALLITGWLIYNNWQERGTEITIDFQSTAG CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCHHHCCCEEEEEECCCCC IVAGRTPIRYQGVDVGLVQSIRLDDNLRNIKVTASIKNDMEDSLREGTQFWLVTPKASLA EEECCCCEEEECCCEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHCCCEEEEECCCHHHC GVSGLDALVGGNYIGMMPGEGKPQSHFTALDTQPKFRLNTGELMIHLSAPDLGSLNNGSL CCCCCHHHHCCCEEEECCCCCCCCCCEEEECCCCCEEEECCEEEEEECCCCCCCCCCCCE VYYRKIPVGKVYDYTIAPDNNGVIIDVLIDRRFANLVKKDSRFWNVSGFKADFSLSGASV EEEEECCCCCEEEEEECCCCCCEEEEEEECHHHHHHHHCCCCEEECCCEEEEEEECCCCE QMESLAALVNGAIAFDSPQNSQDAAPDQPFQLYSDLAHSQRGVAITLDLPGGSHLSEGRT EHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC PLIYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMNSPRISLSNANVSEL CEEECCEEECEEEEEEECCCCCCCEEEEECHHHHHHHHCCCEEEECCCEEEECCCCHHHH LTGNTLELIPGDGDPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYGIDVGQPISLRGIKI HCCCEEEEECCCCCCCCEEEECCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCEECCEEH GQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGIDGVNVQGASAQEWID HHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCEEECCEEEEEECCCCEEECCCCHHHHCC GGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTLTLTASSLPDIQAGS CCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC VVLYRKFQVGEITHVRPKANAFEVDVYIQPEYRNLLTEKSIFWSEGGAKVQLSGSGLTVQ EEEEEEEECCCEEEECCCCCEEEEEEEECCHHHHHHHHCCEEECCCCCEEEECCCCEEEE ASPLNRALKGAISFDNLEGVTLDKGAKRTLYSNETAARAVGSQIILRTFDASKLSAGMPI CCCHHHHHHCCEEECCCCCEEECCCCCCEEECCCHHHHHHCCEEEEEEECCHHHCCCCCE RYLGIDIGQVESLKLAPERNEVLAKAVLYPEYVQNFTRAGTRFSIVSPEISAAGVNNLET EEEECCCCCCCEEEECCCHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH LFQPYINVEPGKGGPLRNFELQTATITDSRYLDGLSIILDTAEAGSLQVGTPVLFRGLEV HHCCCEEECCCCCCCCCCEEEEEEEECCCHHHCCEEEEEECCCCCCEEECCHHHHCCEEE GTVTGFNLGAMSDRVQVSLRISQKFQHLVRQNTVFWLASGYNFEFGLIGGVVKSGTFQQF EEEECCCCCCCCCEEEEEEEHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHCCCCHHHH IRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRKWGTAIPRS HHCCEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]