| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125740
Identifier: 22125740
GI number: 22125740
Start: 2036932
End: 2037366
Strand: Direct
Name: 22125740
Synonym: y1847
Alternate gene names: NA
Gene position: 2036932-2037366 (Clockwise)
Preceding gene: 22125739
Following gene: 22125741
Centisome position: 44.27
GC content: 54.71
Gene sequence:
>435_bases GTGGCGGATCGTGAAAACAGTGTCTCGGTGGGGTCAGTGGGTAATGAACGGCAGCTCACTAATATTGCTGTGGGGACTCA GGGCACTGATGCGGTGAATCTGGATCAACTCAACCATAGCATGTCGAATGTCACCAACGACGCCAATGCTTATACAGACC AGCGCTATTCTGCACTTAAAGAAGATCTGAAAAAACAGGATAGTACGTTAAGTGCGGGGATCGCCGGTGCCATGGCGATG GCGAGCCTGACTCAACCCTATACGCCGGGTGCCAGCATGGCGACCATTGGTGCGGCCAGCTATCGGGGCCAGTCGGCGCT GTCGGTGGGGGTGTCGAGTATTTCTGACAGTGGGCGATGGGTCAGCAAATTGCAGGCCTCCTCTAATACACAAGGCGATA TGGGGGTTGGTGTCGGCGTCGGTTATCAATGGTAA
Upstream 100 bases:
>100_bases GGGGGGGGCAGGCTCCGTGGCGTCTGGCAGCCACAGTACCGCGATGGGTACGGGCAGCAAGGCGACGGCGGCAAACAGCA CCGCGCTGGGGGCCAACTCA
Downstream 100 bases:
>100_bases AGAAAGGCCAACACTGAATATTGTTTAATAATCATTAACGGGTTGTGCGATTTTTTGCACAGCCCGATTCTACTTCTTAG GGATTAAAAGGCAGCACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Adhesin; Autotransporter Adhesin; YadA Domain Protein; Outer Membrane Protein; Surface Protein; YadA-Like Protein; Surface Fibril Protein; Autotransporter; Peptide Transport System Permease SapB; Haemagluttinin Domain Protein; Haemagglutinin; Cell Surface Protein; Haemagglutinin-Related Autotransporter Protein; YadA-Like C-Terminal Domain-Containing; YadA C-Terminal Domain Protein; Hep_Hag Family Protein; Surface-Exposed Adhesin Protein; YadA-Like Haemagluttinin; Haemagglutinin/Invasin; Pe-Pgrs Family Protein; Membrane-Anchored Cell Surface Protein Haemagluttinin; Haemagluttinin Family Protein; Exported Adhesin; Haemagglutinin-Like Protein; Triple Helix Repeat-Containing Collagen; Haemagglutinin Adhesin; Hemagglutinin Domain-Containing Protein; Autotransporter/Adhesin; Hemagluttinin/Autotransporter Adhesin; Outer Membrane Protein Autotransporter And Adhesin; AT Family Autotransporter/Adhesin; Hsf-Like Protein; Inner Membrane Protein
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MADRENSVSVGSVGNERQLTNIAVGTQGTDAVNLDQLNHSMSNVTNDANAYTDQRYSALKEDLKKQDSTLSAGIAGAMAM ASLTQPYTPGASMATIGAASYRGQSALSVGVSSISDSGRWVSKLQASSNTQGDMGVGVGVGYQW
Sequences:
>Translated_144_residues MADRENSVSVGSVGNERQLTNIAVGTQGTDAVNLDQLNHSMSNVTNDANAYTDQRYSALKEDLKKQDSTLSAGIAGAMAM ASLTQPYTPGASMATIGAASYRGQSALSVGVSSISDSGRWVSKLQASSNTQGDMGVGVGVGYQW >Mature_143_residues ADRENSVSVGSVGNERQLTNIAVGTQGTDAVNLDQLNHSMSNVTNDANAYTDQRYSALKEDLKKQDSTLSAGIAGAMAMA SLTQPYTPGASMATIGAASYRGQSALSVGVSSISDSGRWVSKLQASSNTQGDMGVGVGVGYQW
Specific function: Unknown
COG id: COG5295
COG function: function code UW; Autotransporter adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14884; Mature: 14753
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRENSVSVGSVGNERQLTNIAVGTQGTDAVNLDQLNHSMSNVTNDANAYTDQRYSALK CCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH EDLKKQDSTLSAGIAGAMAMASLTQPYTPGASMATIGAASYRGQSALSVGVSSISDSGRW HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHCCCCHHHHHHHHHCCCCCHH VSKLQASSNTQGDMGVGVGVGYQW HHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADRENSVSVGSVGNERQLTNIAVGTQGTDAVNLDQLNHSMSNVTNDANAYTDQRYSALK CCCCCCEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH EDLKKQDSTLSAGIAGAMAMASLTQPYTPGASMATIGAASYRGQSALSVGVSSISDSGRW HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHCCCCHHHHHHHHHCCCCCHH VSKLQASSNTQGDMGVGVGVGYQW HHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA