| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yihM [C]
Identifier: 22125724
GI number: 22125724
Start: 2015800
End: 2016786
Strand: Reverse
Name: yihM [C]
Synonym: y1831
Alternate gene names: 22125724
Gene position: 2016786-2015800 (Counterclockwise)
Preceding gene: 22125734
Following gene: 22125723
Centisome position: 43.84
GC content: 43.06
Gene sequence:
>987_bases ATGAAAATTGGTTTAGAGACTGAGTCCTATCATCTTTTTTTCCAGCAGGGGAAAATGGATATTTTTGATTTCATTGATAA AGCCTGGAGTTTAGGACTGGATGGCGTAGAAATAAATATCATTCCAGATGAGGGCCTTCACCCTGAATTTGGTGTGTTGA GTAGCGATGACCCAACATATCTTGCACGGGTGAGACACGCTATCGAACAACGCAATCTTTATTGTGAAATCGATACCCGT TTTACGTCGGTTAAAGCGATTAGTAAAGCCGTGCAATTTGCATCTGCACTGGGTGCGGATGTTATTCGAACCTACATGTT CCGTCGTGGTCAGTATGAGCCCCTAGAATATCCACGCATTATTCATGAGTTGAAATCACTGGTTCCTCTACTTCAGGCAA ATCGAATTCGTCTGGCCGTTGAAAATCATGAAGATGAAACTGCCGACGAGATTATCCAAATTGTAAAAGCGGTAGACTCC CTATGGGTCGGGGCACATTGCGATATAGGAAATGGCATGATGGCTTGGGAAGAGCCCGTTGTCACTGTCAGCCAACTTGC CCCCTTTACTTACAGTACCCATTTTAAAGATCACATTGTTACTCAACATGACGAGCAATTAGTGGTATGTGGCGTTCCTA TCGGTGAAGGGAGTATCGATATTGATAATTGCTTCAGAATATTGGTTGAAAAATCAGGCATAACTCGGGTCAATATTGAA ACCTGCTTTCCTTATGCCTCTGCATTTTCTCGACCTTGCAACCCCAATGAAGTCAGTACACTAAAAGGGACTTTTGAAGT AAAAACCCCTCCTTTTGACTCCAGCCGAATTAAACCACTGGAATATTACTACCCCGACAAAATATCGCCAGAGTTACTAC AAGAGCTTATGCAAGCTCAGGACCACTGTGTTTATACATCGGTTCAAGTGCTCAAAGCACTGCGTGATAAATATTGCCCC AACACCACAACAGGAATCGTCGAATGA
Upstream 100 bases:
>100_bases AAATATATTTATACTAAGAATACAAAAACATTACCTTTGTCACGGTTATGACTTTCTTTAAACCCTAAACTCCAAATTAG TCATTAATGGAGATAATCCT
Downstream 100 bases:
>100_bases TTATTAAAACTCAAAACGCACCAGCAGCTATCGGACCATACTCCCAAGGCGTTGTCGCCGGTAATTTGCTTTTTATTTCC GGTTGCTGCCCTTTCAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Sugar Isomerase; Sugare Isomerase
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MKIGLETESYHLFFQQGKMDIFDFIDKAWSLGLDGVEINIIPDEGLHPEFGVLSSDDPTYLARVRHAIEQRNLYCEIDTR FTSVKAISKAVQFASALGADVIRTYMFRRGQYEPLEYPRIIHELKSLVPLLQANRIRLAVENHEDETADEIIQIVKAVDS LWVGAHCDIGNGMMAWEEPVVTVSQLAPFTYSTHFKDHIVTQHDEQLVVCGVPIGEGSIDIDNCFRILVEKSGITRVNIE TCFPYASAFSRPCNPNEVSTLKGTFEVKTPPFDSSRIKPLEYYYPDKISPELLQELMQAQDHCVYTSVQVLKALRDKYCP NTTTGIVE
Sequences:
>Translated_328_residues MKIGLETESYHLFFQQGKMDIFDFIDKAWSLGLDGVEINIIPDEGLHPEFGVLSSDDPTYLARVRHAIEQRNLYCEIDTR FTSVKAISKAVQFASALGADVIRTYMFRRGQYEPLEYPRIIHELKSLVPLLQANRIRLAVENHEDETADEIIQIVKAVDS LWVGAHCDIGNGMMAWEEPVVTVSQLAPFTYSTHFKDHIVTQHDEQLVVCGVPIGEGSIDIDNCFRILVEKSGITRVNIE TCFPYASAFSRPCNPNEVSTLKGTFEVKTPPFDSSRIKPLEYYYPDKISPELLQELMQAQDHCVYTSVQVLKALRDKYCP NTTTGIVE >Mature_328_residues MKIGLETESYHLFFQQGKMDIFDFIDKAWSLGLDGVEINIIPDEGLHPEFGVLSSDDPTYLARVRHAIEQRNLYCEIDTR FTSVKAISKAVQFASALGADVIRTYMFRRGQYEPLEYPRIIHELKSLVPLLQANRIRLAVENHEDETADEIIQIVKAVDS LWVGAHCDIGNGMMAWEEPVVTVSQLAPFTYSTHFKDHIVTQHDEQLVVCGVPIGEGSIDIDNCFRILVEKSGITRVNIE TCFPYASAFSRPCNPNEVSTLKGTFEVKTPPFDSSRIKPLEYYYPDKISPELLQELMQAQDHCVYTSVQVLKALRDKYCP NTTTGIVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37170; Mature: 37170
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGLETESYHLFFQQGKMDIFDFIDKAWSLGLDGVEINIIPDEGLHPEFGVLSSDDPTY CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHH LARVRHAIEQRNLYCEIDTRFTSVKAISKAVQFASALGADVIRTYMFRRGQYEPLEYPRI HHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH IHELKSLVPLLQANRIRLAVENHEDETADEIIQIVKAVDSLWVGAHCDIGNGMMAWEEPV HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC VTVSQLAPFTYSTHFKDHIVTQHDEQLVVCGVPIGEGSIDIDNCFRILVEKSGITRVNIE EEHHHHCCCEEECCCHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEHH TCFPYASAFSRPCNPNEVSTLKGTFEVKTPPFDSSRIKPLEYYYPDKISPELLQELMQAQ HHCCHHHHHCCCCCCCCCCEEECEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH DHCVYTSVQVLKALRDKYCPNTTTGIVE CCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKIGLETESYHLFFQQGKMDIFDFIDKAWSLGLDGVEINIIPDEGLHPEFGVLSSDDPTY CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHH LARVRHAIEQRNLYCEIDTRFTSVKAISKAVQFASALGADVIRTYMFRRGQYEPLEYPRI HHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH IHELKSLVPLLQANRIRLAVENHEDETADEIIQIVKAVDSLWVGAHCDIGNGMMAWEEPV HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC VTVSQLAPFTYSTHFKDHIVTQHDEQLVVCGVPIGEGSIDIDNCFRILVEKSGITRVNIE EEHHHHCCCEEECCCHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEHH TCFPYASAFSRPCNPNEVSTLKGTFEVKTPPFDSSRIKPLEYYYPDKISPELLQELMQAQ HHCCHHHHHCCCCCCCCCCEEECEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH DHCVYTSVQVLKALRDKYCPNTTTGIVE CCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA