| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125706
Identifier: 22125706
GI number: 22125706
Start: 1991195
End: 1992118
Strand: Reverse
Name: 22125706
Synonym: y1812
Alternate gene names: NA
Gene position: 1992118-1991195 (Counterclockwise)
Preceding gene: 22125707
Following gene: 22125705
Centisome position: 43.3
GC content: 47.29
Gene sequence:
>924_bases TTGATATTTAGGAGCAGATCTTTGATGTGTATTGATAAACCAGAGTCAGATCCGCTGATCCTTACACTTCCTAACACGCG CTGGGACCAGAATGCAGAGGATAATACCGGTGCCATTGAGGCACTTGAGCAAGGTAAAGTCCTGTTCTTACCTCACCTGA CTTTTGAACTGAGTGAGCAGGAAAAACAGTTACTGGACCCTACCCTGGTTGATGTTAAACGCAAGAATATCAGTTTCAAA CCGTTAGAAGGTGTATTAACTGGCGTGACTGATGCAAGCAAAATCGCATTAACCCGCCAGTTATTGGATCGTTATTATCA AAGTTGCCTCAGTTTGGTACAGCAACTCCTCCCGGTCTATACGCATGCGCTACACAGCCCGACCAATAGCTTGAGATTAC ACCCTGTGGCCGCCTGGCGCGACAGTACGTCATGGCGTAAAGATGATAGCCGCTTACATGTAGATGCTTTCCCGTCACGC CCAAACTACGGTGAGCGTATCATCCGCATATTCACCAATATTAACCCGCATGGTGAAGCGCGTTCCTGGCGTGTCGGTGA AGATTTTACACAACTTGCCAGCCGCTATTTGCCACAACTGGATAGCTATTCATCGCTCAGCAGTTGGTTGCAACATAAAA TCGGTATCACCAAGCGCCCCCGTAGCCATTACGACCATCTGATGCTCCAACTGCATGACAAAATGAAGGCCGATCTCGCT TATCAAAAAGATGGCTTACAACAGGCCATTGAGTTCCCACCAGGCAGCAGTTGGATATGCTTTTCGGATCAAACACCTCA TGCGGCGATGGGCGGACAATTTATGTTGGAGCAAACGTTACTACTACCTGTTGAAGGAATGAAATCCTCCCAGCGCTCAC CACTGAAAATACTGGAAGCGTTGACACAAAAAACGCTGATATAA
Upstream 100 bases:
>100_bases TTTCCACCATTAGTTCGACCGATAAAAATATAAAAAGCGGAAGTGAGCATCTCAAGCCTCACGTTACCTATAATAAAGGG TTATTATTGACAGAATTATA
Downstream 100 bases:
>100_bases GTGGCCACATAGCGTCTAACTCCCTCACTAACCCTATGGGGGAGTTAATAGACTAAGGCTCACGCGCCTGCCTGATATAC CCCGCCAACTAATCATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MIFRSRSLMCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFK PLEGVLTGVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSR PNYGERIIRIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLA YQKDGLQQAIEFPPGSSWICFSDQTPHAAMGGQFMLEQTLLLPVEGMKSSQRSPLKILEALTQKTLI
Sequences:
>Translated_307_residues MIFRSRSLMCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFK PLEGVLTGVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSR PNYGERIIRIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLA YQKDGLQQAIEFPPGSSWICFSDQTPHAAMGGQFMLEQTLLLPVEGMKSSQRSPLKILEALTQKTLI >Mature_307_residues MIFRSRSLMCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQEKQLLDPTLVDVKRKNISFK PLEGVLTGVTDASKIALTRQLLDRYYQSCLSLVQQLLPVYTHALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSR PNYGERIIRIFTNINPHGEARSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLA YQKDGLQQAIEFPPGSSWICFSDQTPHAAMGGQFMLEQTLLLPVEGMKSSQRSPLKILEALTQKTLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35087; Mature: 35087
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFRSRSLMCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQ CCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECCEEEECHH EKQLLDPTLVDVKRKNISFKPLEGVLTGVTDASKIALTRQLLDRYYQSCLSLVQQLLPVY HHHHCCHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH THALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERIIRIFTNINPHGEA HHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC RSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLA CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH YQKDGLQQAIEFPPGSSWICFSDQTPHAAMGGQFMLEQTLLLPVEGMKSSQRSPLKILEA HHHHHHHHHHCCCCCCCEEEECCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH LTQKTLI HHHHCCC >Mature Secondary Structure MIFRSRSLMCIDKPESDPLILTLPNTRWDQNAEDNTGAIEALEQGKVLFLPHLTFELSEQ CCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEEECCEEEECHH EKQLLDPTLVDVKRKNISFKPLEGVLTGVTDASKIALTRQLLDRYYQSCLSLVQQLLPVY HHHHCCHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH THALHSPTNSLRLHPVAAWRDSTSWRKDDSRLHVDAFPSRPNYGERIIRIFTNINPHGEA HHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC RSWRVGEDFTQLASRYLPQLDSYSSLSSWLQHKIGITKRPRSHYDHLMLQLHDKMKADLA CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH YQKDGLQQAIEFPPGSSWICFSDQTPHAAMGGQFMLEQTLLLPVEGMKSSQRSPLKILEA HHHHHHHHHHCCCCCCCEEEECCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH LTQKTLI HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA