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The map label for this gene is ytfH [H]

Identifier: 22125701

GI number: 22125701

Start: 1987958

End: 1988530

Strand: Direct

Name: ytfH [H]

Synonym: y1807

Alternate gene names: 22125701

Gene position: 1987958-1988530 (Clockwise)

Preceding gene: 22125696

Following gene: 22125702

Centisome position: 43.21

GC content: 46.42

Gene sequence:

>573_bases
TTGGCCGGTGGCACCGGTGACTGCGATCATAATGACGCTCCATATTTAGAAGAAGAGCAGTTGACGCTCAGAGAAGACTA
TTTTGGATATATCTGCCCAAAATCATCCTTAAAGCCATCATATGCAATATACTCACTTTACGTAAGTACATACCAAAAGG
TTAGTGTGAGAGTGACAAAACTACAAAATATGAATGGCAACATTTCATTTCCGGAACAACTCAGGCGCGGTGAACTGCTT
AATGTCGATTGCCCGTCAAGAGAGATACTCAAGCGGGTGACTAGCCGCTGGGGGGTGTTGGTCTTGATCGCTTTGAGTAA
TGAAACACTGCGTTTTAGTGCATTGAGACGAAAGATTGGTGGGGTCAGTGAGAAAATGTTGGCACAAACGCTCCAGCATC
TTGAAGAAGATGGTTTTATTGACAGGACTGCTTATCCGGTAGTGCCACCTCACGTGGAATACAGCCTCACTCCGTTAGGA
AAAGAGATCCAAGAGCAGGTGGAAGGGCTGACGGTGTGGCTGGAGACAAACTTGCATCGGATTATGGAACAACGGCAGCA
GCGGTCAGTATGA

Upstream 100 bases:

>100_bases
ACGCCATAAGATCCTTGGCTTTATCAGGGCTACGGACTGCCGCAATGATGTCGTGGGCGGGCACTTTTTTTAATAATACG
TTAATAACGAGGCGGCCTAA

Downstream 100 bases:

>100_bases
CCGTCGTGATTTATCGTCTTTGGCCTCATATTCTGGTTGTGCCAGCGCCAACAGAAGATGGCCAACCTGTTTTATAGCGC
GGTGCTTGAAGGGGGTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MAGGTGDCDHNDAPYLEEEQLTLREDYFGYICPKSSLKPSYAIYSLYVSTYQKVSVRVTKLQNMNGNISFPEQLRRGELL
NVDCPSREILKRVTSRWGVLVLIALSNETLRFSALRRKIGGVSEKMLAQTLQHLEEDGFIDRTAYPVVPPHVEYSLTPLG
KEIQEQVEGLTVWLETNLHRIMEQRQQRSV

Sequences:

>Translated_190_residues
MAGGTGDCDHNDAPYLEEEQLTLREDYFGYICPKSSLKPSYAIYSLYVSTYQKVSVRVTKLQNMNGNISFPEQLRRGELL
NVDCPSREILKRVTSRWGVLVLIALSNETLRFSALRRKIGGVSEKMLAQTLQHLEEDGFIDRTAYPVVPPHVEYSLTPLG
KEIQEQVEGLTVWLETNLHRIMEQRQQRSV
>Mature_189_residues
AGGTGDCDHNDAPYLEEEQLTLREDYFGYICPKSSLKPSYAIYSLYVSTYQKVSVRVTKLQNMNGNISFPEQLRRGELLN
VDCPSREILKRVTSRWGVLVLIALSNETLRFSALRRKIGGVSEKMLAQTLQHLEEDGFIDRTAYPVVPPHVEYSLTPLGK
EIQEQVEGLTVWLETNLHRIMEQRQQRSV

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=123, Percent_Identity=61.7886178861789, Blast_Score=164, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 21747; Mature: 21616

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGTGDCDHNDAPYLEEEQLTLREDYFGYICPKSSLKPSYAIYSLYVSTYQKVSVRVTK
CCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEE
LQNMNGNISFPEQLRRGELLNVDCPSREILKRVTSRWGVLVLIALSNETLRFSALRRKIG
EECCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHC
GVSEKMLAQTLQHLEEDGFIDRTAYPVVPPHVEYSLTPLGKEIQEQVEGLTVWLETNLHR
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHEEEEEHHHHHH
IMEQRQQRSV
HHHHHHHCCC
>Mature Secondary Structure 
AGGTGDCDHNDAPYLEEEQLTLREDYFGYICPKSSLKPSYAIYSLYVSTYQKVSVRVTK
CCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEE
LQNMNGNISFPEQLRRGELLNVDCPSREILKRVTSRWGVLVLIALSNETLRFSALRRKIG
EECCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHC
GVSEKMLAQTLQHLEEDGFIDRTAYPVVPPHVEYSLTPLGKEIQEQVEGLTVWLETNLHR
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHEEEEEHHHHHH
IMEQRQQRSV
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]