| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yceA [C]
Identifier: 22125632
GI number: 22125632
Start: 1919805
End: 1920926
Strand: Direct
Name: yceA [C]
Synonym: y1738
Alternate gene names: 22125632
Gene position: 1919805-1920926 (Clockwise)
Preceding gene: 22125631
Following gene: 161484825
Centisome position: 41.73
GC content: 45.81
Gene sequence:
>1122_bases TTGAACAGTAACCAATTTTTATCAGTAACCTCTTCGAAAGACAGGACGTACACCATGCCAGTGTTACATAACCGAATTTC TAATGAGGAACTCAAAGCGCGTATGTTGGCTGAAACCGAGCCGCGCACCACAGTTTCTTTTTATAAATACTTCACTCTGG AAGATGCTAAAACCTTCCGTGATAACCTCTATAGCCAATTTGTTAAGCTCGGTGTTTTTGGCCGCGTCTATGTGGCAAAA GAGGGTATCAATGCACAGATCAGCGTCCCCGCGAATCGATATGATGAATTTAAAATCGCGCTGTTTGCCTCACACCCTGC GCTGGATCAAGTACGGTTGAATGTTGCGCACGAAGATGACGGTAAATCATTTTGGGTTTTGCGCCTGAAAGTTCGTGAGC GCATTGTGGCTGATGGCATTGATGATGACAGCTTTGATCCTGCCAATATCGGGCACTATCTGAAAGCCGATCAGGTCAAT CAGATGATTGATGATCCAGATACGTTGTTTGTTGATATGCGTAACCACTATGAATACGAAGTGGGCCATTTTGAAAACGC AATAGAAGTCCCTTCGGATACATTCCGTGAACAACTGCCGATGGCGGTTGATATGCTGCAACATGATAAAGAGAAGAATA TTGTCATGTATTGCACCGGGGGGATCCGTTGCGAGAAAGCCAGTGCTTATATGCTGCACAATGGCTTCAAAAATGTTTAT CACGTTGAAGGCGGCATTATTGAATATGCACGTAAAGCAAAAGAGCAGGGGCTACCACTGAAATTCATCGGCAAAAATTT TGTGTTCGATGAACGGATGGGGGAACGGATTTCTGATGATGTCATAGCGCACTGCCATCAATGTGGAACGCCTTGTGACG CGCATACCAACTGTAAAAACGATGGGTGCCACTTACTGTTTATCCAGTGTCCAGTGTGCGCGGCGAAGTTTGAAGGGTGT TGTAGCCAGATTTGCCAGGAAGAGCTGAAACTGCCACAGGAAGAGCAACGCTCCCGGCGGGCAGGGCGTGAAAATGGCAT TAAGATTTTTAATAAGTCTAAAGGGTTGTTGCAAGCCACCATGCACATTCCCTCGCCAGAAAAGAGTGCGGATGAAAAGT AG
Upstream 100 bases:
>100_bases TCGGGTATTATATGGGCCGCACGGGGTCATGCCTGTCAAAATACCCGTTCTTTTGGGCAATCATTTATCGGAGATACTGG CTGGTTTTTGATGTTACCTA
Downstream 100 bases:
>100_bases CCACTCCGCTTAACCCGCTGGTTATACTATTAAAATTAGACGTTAGTTGACTTAAAATTAGGCTTTAGTTGACGTTGTCG GTTACTTTATCCGCTGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MNSNQFLSVTSSKDRTYTMPVLHNRISNEELKARMLAETEPRTTVSFYKYFTLEDAKTFRDNLYSQFVKLGVFGRVYVAK EGINAQISVPANRYDEFKIALFASHPALDQVRLNVAHEDDGKSFWVLRLKVRERIVADGIDDDSFDPANIGHYLKADQVN QMIDDPDTLFVDMRNHYEYEVGHFENAIEVPSDTFREQLPMAVDMLQHDKEKNIVMYCTGGIRCEKASAYMLHNGFKNVY HVEGGIIEYARKAKEQGLPLKFIGKNFVFDERMGERISDDVIAHCHQCGTPCDAHTNCKNDGCHLLFIQCPVCAAKFEGC CSQICQEELKLPQEEQRSRRAGRENGIKIFNKSKGLLQATMHIPSPEKSADEK
Sequences:
>Translated_373_residues MNSNQFLSVTSSKDRTYTMPVLHNRISNEELKARMLAETEPRTTVSFYKYFTLEDAKTFRDNLYSQFVKLGVFGRVYVAK EGINAQISVPANRYDEFKIALFASHPALDQVRLNVAHEDDGKSFWVLRLKVRERIVADGIDDDSFDPANIGHYLKADQVN QMIDDPDTLFVDMRNHYEYEVGHFENAIEVPSDTFREQLPMAVDMLQHDKEKNIVMYCTGGIRCEKASAYMLHNGFKNVY HVEGGIIEYARKAKEQGLPLKFIGKNFVFDERMGERISDDVIAHCHQCGTPCDAHTNCKNDGCHLLFIQCPVCAAKFEGC CSQICQEELKLPQEEQRSRRAGRENGIKIFNKSKGLLQATMHIPSPEKSADEK >Mature_373_residues MNSNQFLSVTSSKDRTYTMPVLHNRISNEELKARMLAETEPRTTVSFYKYFTLEDAKTFRDNLYSQFVKLGVFGRVYVAK EGINAQISVPANRYDEFKIALFASHPALDQVRLNVAHEDDGKSFWVLRLKVRERIVADGIDDDSFDPANIGHYLKADQVN QMIDDPDTLFVDMRNHYEYEVGHFENAIEVPSDTFREQLPMAVDMLQHDKEKNIVMYCTGGIRCEKASAYMLHNGFKNVY HVEGGIIEYARKAKEQGLPLKFIGKNFVFDERMGERISDDVIAHCHQCGTPCDAHTNCKNDGCHLLFIQCPVCAAKFEGC CSQICQEELKLPQEEQRSRRAGRENGIKIFNKSKGLLQATMHIPSPEKSADEK
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI111038120, Length=353, Percent_Identity=29.1784702549575, Blast_Score=120, Evalue=2e-27, Organism=Escherichia coli, GI1787294, Length=348, Percent_Identity=73.8505747126437, Blast_Score=564, Evalue=1e-162,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR020936 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 42612; Mature: 42612
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNQFLSVTSSKDRTYTMPVLHNRISNEELKARMLAETEPRTTVSFYKYFTLEDAKTFR CCCCCEEEEECCCCCEEECHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHH DNLYSQFVKLGVFGRVYVAKEGINAQISVPANRYDEFKIALFASHPALDQVRLNVAHEDD HHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCC GKSFWVLRLKVRERIVADGIDDDSFDPANIGHYLKADQVNQMIDDPDTLFVDMRNHYEYE CCEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCHHCHHHHHHHHCCCCEEEEEECCCCEEE VGHFENAIEVPSDTFREQLPMAVDMLQHDKEKNIVMYCTGGIRCEKASAYMLHNGFKNVY CCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCEEEEECCCEEECCCCHHHHHHCCCCEE HVEGGIIEYARKAKEQGLPLKFIGKNFVFDERMGERISDDVIAHCHQCGTPCDAHTNCKN EECCCHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DGCHLLFIQCPVCAAKFEGCCSQICQEELKLPQEEQRSRRAGRENGIKIFNKSKGLLQAT CCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCEEEEE MHIPSPEKSADEK EECCCCCCCCCCC >Mature Secondary Structure MNSNQFLSVTSSKDRTYTMPVLHNRISNEELKARMLAETEPRTTVSFYKYFTLEDAKTFR CCCCCEEEEECCCCCEEECHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHH DNLYSQFVKLGVFGRVYVAKEGINAQISVPANRYDEFKIALFASHPALDQVRLNVAHEDD HHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCC GKSFWVLRLKVRERIVADGIDDDSFDPANIGHYLKADQVNQMIDDPDTLFVDMRNHYEYE CCEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCHHCHHHHHHHHCCCCEEEEEECCCCEEE VGHFENAIEVPSDTFREQLPMAVDMLQHDKEKNIVMYCTGGIRCEKASAYMLHNGFKNVY CCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCEEEEECCCEEECCCCHHHHHHCCCCEE HVEGGIIEYARKAKEQGLPLKFIGKNFVFDERMGERISDDVIAHCHQCGTPCDAHTNCKN EECCCHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DGCHLLFIQCPVCAAKFEGCCSQICQEELKLPQEEQRSRRAGRENGIKIFNKSKGLLQAT CCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEECCCCEEEEE MHIPSPEKSADEK EECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA