| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125615
Identifier: 22125615
GI number: 22125615
Start: 1902866
End: 1903876
Strand: Direct
Name: 22125615
Synonym: y1722
Alternate gene names: NA
Gene position: 1902866-1903876 (Clockwise)
Preceding gene: 22125612
Following gene: 22125617
Centisome position: 41.36
GC content: 47.87
Gene sequence:
>1011_bases GTGGATATCCCGCTAAGGAGTTTTTTGGCTATGGAAAACGCTATTCATTCCTCTGATTTGAAAACGATCCTGCATTCAAA ACGATCCAATATTTACTATTTAGAATATTGCCGTGTATTGGTTAATGGTGGGCGAGTTGAATATGTCACCGATGAAGGTA AACAATCCCTTTACTGGAATATCCCCATAGCGAACACCACCGTTATTATGCTGGGAACCGGGACTTCGGTGACTCAGGCT GCTATGCGTGAGTTTGCCCGAGCCGGGGTCTTAGTCGGTTTTTGTGGCGGGGGTGGGACGCCGCTTTTTGCGGCTAATGA CGTAGAGGTCAATGTCTCGTGGCTCACTGCACAAAGCGAATACCGGCCAACCGAGTATCTGCACGATTGGGTCAGTTTCT GGTTCGATGATGAAAAAAGACTGGCAGCAGCAGTGGCTTTCCAGCGCATCAGGATCGCCCAAATTCAACAACATTGGCTC AGCAGCCACATACAGCGCGAATCTCTTTTTCCGGTTAATCACGATCAATTATTATTTATCCTCACCCGTTTTGAGCAAAA TTTAGCAAATTGTCTCACCAGTAATGACCTTATGGTTCAGGAAGCGGTATTAACAAAGGCACTCTATAAACTGGCTGCTA ATACAGTGAATTACGGCGATTTCACCCGCGCTAAACGCGGTGGGGGCATCGATCTAGCTAATCGTTTTCTCGATCACGGA AATTATCTCGCCTATGGCTTAGCGGCGACGGCGACATGGGTTATTGGCTTACCCCATGGTCTGTCTGTTTTACACGGTAA GACCCGGCGTGGTGGTTTGGTCTTTGATGTGGCCGATTTAATTAAAGATGCGCTGGTGCTACCGCAGGCATTTATTGCCG CCATGCAGGGAGAAGAAGAGCAAGAATTTCGTCAGCGCTGCATTAGCGGGTTTCAACGAACCGAAGCGCTGGATGTGATG ATTGATGGAATAAAAGAAACGGCAGCGTTATGTAGCCAGGTTCCGCGATGA
Upstream 100 bases:
>100_bases TCAACTACTGGCTTCCTGCAACTCGAATTACTTTGGGTATAGAGAGAGTTATTTTCTGGAATAATATCTGCTAATAAAGC GCTAACGGAAAAATAGCGCG
Downstream 100 bases:
>100_bases ATATTTTACTGATATCCCAATGCCATAAACGGGCGCTTAATGAAACACGCCGTATTTTGGATCAGTTTGCTGAACGTAAA GGTGATCGGACATGGCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MDIPLRSFLAMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIMLGTGTSVTQA AMREFARAGVLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWL SSHIQRESLFPVNHDQLLFILTRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRAKRGGGIDLANRFLDHG NYLAYGLAATATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISGFQRTEALDVM IDGIKETAALCSQVPR
Sequences:
>Translated_336_residues MDIPLRSFLAMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIMLGTGTSVTQA AMREFARAGVLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWL SSHIQRESLFPVNHDQLLFILTRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRAKRGGGIDLANRFLDHG NYLAYGLAATATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISGFQRTEALDVM IDGIKETAALCSQVPR >Mature_336_residues MDIPLRSFLAMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIMLGTGTSVTQA AMREFARAGVLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWL SSHIQRESLFPVNHDQLLFILTRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRAKRGGGIDLANRFLDHG NYLAYGLAATATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISGFQRTEALDVM IDGIKETAALCSQVPR
Specific function: Unknown
COG id: COG1518
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37524; Mature: 37524
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIPLRSFLAMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEEEEECCCCCEEEEE IPIANTTVIMLGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANDVEVNVSWLTAQSE CCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCEEEEEEEEECCCC YRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLFPVNHDQLLFI CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LTRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRAKRGGGIDLANRFLDHG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHCC NYLAYGLAATATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEE CEEEEHHHHHHHEEEECCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHH QEFRQRCISGFQRTEALDVMIDGIKETAALCSQVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDIPLRSFLAMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEEEEECCCCCEEEEE IPIANTTVIMLGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANDVEVNVSWLTAQSE CCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCEEEEEEEEECCCC YRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLFPVNHDQLLFI CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LTRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRAKRGGGIDLANRFLDHG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHCC NYLAYGLAATATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEE CEEEEHHHHHHHEEEECCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHH QEFRQRCISGFQRTEALDVMIDGIKETAALCSQVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA