| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125595
Identifier: 22125595
GI number: 22125595
Start: 1883637
End: 1885682
Strand: Direct
Name: 22125595
Synonym: y1701
Alternate gene names: NA
Gene position: 1883637-1885682 (Clockwise)
Preceding gene: 22125594
Following gene: 22125596
Centisome position: 40.94
GC content: 51.76
Gene sequence:
>2046_bases GTGAAGGTGGAGGTGGGCCGCGACCTGTTGCTGCAAAGCCAGCAGGACAGCGATAACTATGATGCGAAGCAGCAAAGTAG CAGTGTTGGCGGCAGTTTCAGCCCTGGCTCCATGACGGGCAGTATCAGTATCAATGGCAGCCAGGACAAGCTGAACAGCA ACTTTGACTCGGTGCAGGAGCAGACGGGTATCTTTGCCGGTTCGGGCGGCTTTGATATCACGGTAGGTGGACACACTCAG CTTGACGGTGCGGTGATTGGCAGCACCGTGACAGCCGATAAAAACACGCTGGATACCGGGACACTGGGCTTCAGTGATAT CGATAATCAAGCCGATTTCAAGGTTGAACATCAAAGTGTGGGTATCAGCACCGGGGGGAATATCGGCAGTCAGTTTGTTG GCAATATGGCCAACGGCTTGCTGGTCGGGGCCAATAACGAAGGTCACGCCGACAGCACCACCCATGCGGCCGTTTCTGAA GGTACGATCACGGTGCGCGACACGGATAACCAGCAGCAGAATGTTGATGACCTGAGCCGTGATGTGGAGCAGGCCAACAA TGCCCTTTCCCCTATCTTTGATAAAGAGAAAGAACAAAACCGGCTGAAGGAAGCGCAGCTTATCGGCGAGATAGGCAGTC AGGTGGGTGATGTGTTCCGCACGCAAGGGCAGATTATCGCCACCCAGGCGGCGAATGAAAAAATGCAGGGGGTGAGTGAG GCTGATCGTGAGGCGGCGAAAGCCAACTGGGAAAAAGCCAATCCGGGTCAGGTTGCAACGGCTGAGGATATCAACGGTCA GGTTTATAAAACGGCCTATGATCAGGCATTCAATGCGTCGGGTTACGGCACCGGGGGTAAATTCCAGCAGACGGTACAAG CGGCGACAGCGGCCCTCCAGGGGCTGGCGGGCGGAGATATAGCCAAAGCGATAGCGGGAGGCAGTGCGCCGTATCTGGCG GAAGTGATTAAGCAAAGCACGGGTGATAACGAAGAAGCGCGACTGGCGGCACATGCGGTGGTCGGTTCTGTTCTGGCACA TCTACAGGGCAATAGTGCGGTTGCGGGAGGCGCAGGTGCCTTGACGGGTGAGATAGCGGCTGATTTAATCATGCAGCAGT TGTACCCGGGGAAAATGGTTAGCGAACTCAGCGAGACAGAAAAACAGACCATCAGCGCGTTAAGTACATTAGCGGCAGGG CTGGCGGGGGGCTTGACGGGAGACAGCAGCGCCGACGCGGTTGCGGGTGCGCAGGCTGGGAAAAATGCGGTGGAGAATAA TGCGCTGGGTCTGGCTCTGAAGGGATGTGGTATCGCTGCACCCTGCCGAAGTCTGATAGCGAAGCAAGTTTTGGAGATCG GTGTTAAAGCGGGTATTACGGGTATTGTCGCCAAAGAGATCGCAGACAAGATATCGGAAGACGATCTTGATCATCTTGTT ACTCTGAAGATGATGGGCAATGATGAGATCACCGAAAAATACCTGAATTCGCTTCAGGATAAATATGCACCTGCTCATAC CGGTGGTGATCAGAACGCTGGGTCGGGTCCAACCGATACGGGGGGCAATCAAATAGCGGATAATTCGCCAGATCATACAG GTAATGATCAATCTACAGGTCAGGGTGCTACTAATACTGGTAATACTGATGGCAAGCCGGATGCGGGTGGGAATGTGTTG GTAAATCCGGGGGCGGATCCTCTCACGAAGAAAGACATAGTTTATCTTTCAGAAAACCCTAACGGTAAGATAGATACTGT TATCAATGAAACTCTATCGGGTAAGAAAAACTTTACCAGTTCGACAACATTGACTTCAGATGAAGCACTCGCTGCTGGTT TAAAATTCTTAGGAACAGGATATAAAGAGATCGGTAAGTCAGGATCTGGTGTTTACCATAGCGCGGATGGAACAAAAGAA TTTAGGATTGACTCAGGTTCAATTGATGGGGCTCATGCGCCAGGGGTTCCACATGTACACTTTGGTGTAAAAAATCCTGA AACAGGTAAGTATATTTCTAACAATCATGTTCCTTATAAAGATTAA
Upstream 100 bases:
>100_bases AATGCCGATCAGTTAAGGATCTCGTTCAACCGATCCTTAACTGATCGGCATTGGGCCTAGCGATACCTCACTGGTCGGTG CGCAGGTCAGCGGCGAAACG
Downstream 100 bases:
>100_bases GGAAGCAAAATGATCTTGAAAAAAGGCATCGTTAATGATGGTGAATATGTTGGATGGGAAATCCAACTCATTGATGACAC TAAGGGTGAAACAGGAGGTT
Product: hemagglutinin-like secreted protein
Products: NA
Alternate protein names: Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Hemagglutinin; Hemagglutinin-Related Protein; Hemolysin; Filamentous Haemagglutinin; Hemagglutinin/Hemolysin-Related Protein; Adhesin/Hemagglutinin; Adhesin; Adhesin/Hemolysin; Large Exoprotein Involved In Heme Utilization Or Adhesion; ShlA/HecA/FhaA Exofamily Protein; Cell Surface Protein; Adhesin HecA Family; Hemagglutinin; Adhesin/Hemagglutinin/Hemolysin; Hemagglutinin-Like Protein; Filamentous Hemagglutinin Outer Membrane Protein; Haemolysin-Like Protein; Hemolysin/Hemagglutinin-Like Protein; Hemolysin/Hemagglutinin-Like Protein HecA; Contact-Dependent Inhibitor A; FhaB Protein; Haemolysin/Haemagglutinin; AT-2 Family Transporter; Cell Surface Haemagluttinin Protein; Adhesin/Haemagluttinin; Adhesin/Hemolysin Adhesin HecA; Filamentous Hemagglutinin/Adhesin; Filamentous Haemagglutinin Family Protein; Filamentous Haemagglutinin N-TerminalAdhesin HecA; Contact-Dependent Inhibition Of Growth Factor CdiA; Filamentous Hemagglutinin Protein; Filamentous Hemagglutinin / Adhesin; Hemagglutinin/Adhesin Repeat-Containing Protein; Hemagglutinin/Hemolysin Family Protein; Exoprotein Adhesin Or Hemolysin; Surface Adhesin; Filamentous Haemagglutinin Adhesin HecA; Hemagglutinin/Hemolysin- Related Exoprotein; Adhesin/Hemagglutinin/Hemolysin Fragment; Hemagglutination Activity Domain Protein; Fimbrial Adhesin; Hemagglutinin-Like Secreted Protein; Member Of ShlA/HecA/FhaA Exoprotein Family
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MKVEVGRDLLLQSQQDSDNYDAKQQSSSVGGSFSPGSMTGSISINGSQDKLNSNFDSVQEQTGIFAGSGGFDITVGGHTQ LDGAVIGSTVTADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSE GTITVRDTDNQQQNVDDLSRDVEQANNALSPIFDKEKEQNRLKEAQLIGEIGSQVGDVFRTQGQIIATQAANEKMQGVSE ADREAAKANWEKANPGQVATAEDINGQVYKTAYDQAFNASGYGTGGKFQQTVQAATAALQGLAGGDIAKAIAGGSAPYLA EVIKQSTGDNEEARLAAHAVVGSVLAHLQGNSAVAGGAGALTGEIAADLIMQQLYPGKMVSELSETEKQTISALSTLAAG LAGGLTGDSSADAVAGAQAGKNAVENNALGLALKGCGIAAPCRSLIAKQVLEIGVKAGITGIVAKEIADKISEDDLDHLV TLKMMGNDEITEKYLNSLQDKYAPAHTGGDQNAGSGPTDTGGNQIADNSPDHTGNDQSTGQGATNTGNTDGKPDAGGNVL VNPGADPLTKKDIVYLSENPNGKIDTVINETLSGKKNFTSSTTLTSDEALAAGLKFLGTGYKEIGKSGSGVYHSADGTKE FRIDSGSIDGAHAPGVPHVHFGVKNPETGKYISNNHVPYKD
Sequences:
>Translated_681_residues MKVEVGRDLLLQSQQDSDNYDAKQQSSSVGGSFSPGSMTGSISINGSQDKLNSNFDSVQEQTGIFAGSGGFDITVGGHTQ LDGAVIGSTVTADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSE GTITVRDTDNQQQNVDDLSRDVEQANNALSPIFDKEKEQNRLKEAQLIGEIGSQVGDVFRTQGQIIATQAANEKMQGVSE ADREAAKANWEKANPGQVATAEDINGQVYKTAYDQAFNASGYGTGGKFQQTVQAATAALQGLAGGDIAKAIAGGSAPYLA EVIKQSTGDNEEARLAAHAVVGSVLAHLQGNSAVAGGAGALTGEIAADLIMQQLYPGKMVSELSETEKQTISALSTLAAG LAGGLTGDSSADAVAGAQAGKNAVENNALGLALKGCGIAAPCRSLIAKQVLEIGVKAGITGIVAKEIADKISEDDLDHLV TLKMMGNDEITEKYLNSLQDKYAPAHTGGDQNAGSGPTDTGGNQIADNSPDHTGNDQSTGQGATNTGNTDGKPDAGGNVL VNPGADPLTKKDIVYLSENPNGKIDTVINETLSGKKNFTSSTTLTSDEALAAGLKFLGTGYKEIGKSGSGVYHSADGTKE FRIDSGSIDGAHAPGVPHVHFGVKNPETGKYISNNHVPYKD >Mature_681_residues MKVEVGRDLLLQSQQDSDNYDAKQQSSSVGGSFSPGSMTGSISINGSQDKLNSNFDSVQEQTGIFAGSGGFDITVGGHTQ LDGAVIGSTVTADKNTLDTGTLGFSDIDNQADFKVEHQSVGISTGGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSE GTITVRDTDNQQQNVDDLSRDVEQANNALSPIFDKEKEQNRLKEAQLIGEIGSQVGDVFRTQGQIIATQAANEKMQGVSE ADREAAKANWEKANPGQVATAEDINGQVYKTAYDQAFNASGYGTGGKFQQTVQAATAALQGLAGGDIAKAIAGGSAPYLA EVIKQSTGDNEEARLAAHAVVGSVLAHLQGNSAVAGGAGALTGEIAADLIMQQLYPGKMVSELSETEKQTISALSTLAAG LAGGLTGDSSADAVAGAQAGKNAVENNALGLALKGCGIAAPCRSLIAKQVLEIGVKAGITGIVAKEIADKISEDDLDHLV TLKMMGNDEITEKYLNSLQDKYAPAHTGGDQNAGSGPTDTGGNQIADNSPDHTGNDQSTGQGATNTGNTDGKPDAGGNVL VNPGADPLTKKDIVYLSENPNGKIDTVINETLSGKKNFTSSTTLTSDEALAAGLKFLGTGYKEIGKSGSGVYHSADGTKE FRIDSGSIDGAHAPGVPHVHFGVKNPETGKYISNNHVPYKD
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69888; Mature: 69888
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVEVGRDLLLQSQQDSDNYDAKQQSSSVGGSFSPGSMTGSISINGSQDKLNSNFDSVQE CCCCCCCHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCHHHHCCCHHHHHH QTGIFAGSGGFDITVGGHTQLDGAVIGSTVTADKNTLDTGTLGFSDIDNQADFKVEHQSV HHCEEECCCCCEEEECCCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCEEEEHHEE GISTGGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSEGTITVRDTDNQQQNVDDLSR CCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHEECCCEEEEECCCCCCCCHHHHHH DVEQANNALSPIFDKEKEQNRLKEAQLIGEIGSQVGDVFRTQGQIIATQAANEKMQGVSE HHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCHHH ADREAAKANWEKANPGQVATAEDINGQVYKTAYDQAFNASGYGTGGKFQQTVQAATAALQ HHHHHHHCCCCCCCCCCEEEHHCCCCCEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHH GLAGGDIAKAIAGGSAPYLAEVIKQSTGDNEEARLAAHAVVGSVLAHLQGNSAVAGGAGA HCCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCH LTGEIAADLIMQQLYPGKMVSELSETEKQTISALSTLAAGLAGGLTGDSSADAVAGAQAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC KNAVENNALGLALKGCGIAAPCRSLIAKQVLEIGVKAGITGIVAKEIADKISEDDLDHLV CHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEE TLKMMGNDEITEKYLNSLQDKYAPAHTGGDQNAGSGPTDTGGNQIADNSPDHTGNDQSTG EEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QGATNTGNTDGKPDAGGNVLVNPGADPLTKKDIVYLSENPNGKIDTVINETLSGKKNFTS CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCC STTLTSDEALAAGLKFLGTGYKEIGKSGSGVYHSADGTKEFRIDSGSIDGAHAPGVPHVH CCCCCCHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCEEE FGVKNPETGKYISNNHVPYKD ECCCCCCCCCEECCCCCCCCC >Mature Secondary Structure MKVEVGRDLLLQSQQDSDNYDAKQQSSSVGGSFSPGSMTGSISINGSQDKLNSNFDSVQE CCCCCCCHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCHHHHCCCHHHHHH QTGIFAGSGGFDITVGGHTQLDGAVIGSTVTADKNTLDTGTLGFSDIDNQADFKVEHQSV HHCEEECCCCCEEEECCCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCEEEEHHEE GISTGGNIGSQFVGNMANGLLVGANNEGHADSTTHAAVSEGTITVRDTDNQQQNVDDLSR CCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHEECCCEEEEECCCCCCCCHHHHHH DVEQANNALSPIFDKEKEQNRLKEAQLIGEIGSQVGDVFRTQGQIIATQAANEKMQGVSE HHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCHHH ADREAAKANWEKANPGQVATAEDINGQVYKTAYDQAFNASGYGTGGKFQQTVQAATAALQ HHHHHHHCCCCCCCCCCEEEHHCCCCCEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHH GLAGGDIAKAIAGGSAPYLAEVIKQSTGDNEEARLAAHAVVGSVLAHLQGNSAVAGGAGA HCCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCH LTGEIAADLIMQQLYPGKMVSELSETEKQTISALSTLAAGLAGGLTGDSSADAVAGAQAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC KNAVENNALGLALKGCGIAAPCRSLIAKQVLEIGVKAGITGIVAKEIADKISEDDLDHLV CHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEE TLKMMGNDEITEKYLNSLQDKYAPAHTGGDQNAGSGPTDTGGNQIADNSPDHTGNDQSTG EEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QGATNTGNTDGKPDAGGNVLVNPGADPLTKKDIVYLSENPNGKIDTVINETLSGKKNFTS CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCC STTLTSDEALAAGLKFLGTGYKEIGKSGSGVYHSADGTKEFRIDSGSIDGAHAPGVPHVH CCCCCCHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCEEE FGVKNPETGKYISNNHVPYKD ECCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA